| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77458388
Identifier: 77458388
GI number: 77458388
Start: 2443136
End: 2443741
Strand: Direct
Name: 77458388
Synonym: Pfl01_2161
Alternate gene names: NA
Gene position: 2443136-2443741 (Clockwise)
Preceding gene: 77458386
Following gene: 77458389
Centisome position: 37.95
GC content: 61.55
Gene sequence:
>606_bases ATGCAAGCAAAGGCCCGCGAGGTTCATGTACCACCGGTGTTGCAAGATTTGCGCGCCGGCACGGCCGAACTGCACATTGC ACTTGAAAAGCGCCTTCCTTTTTTCTCCGACACCCTTGATCTGAACGCTTTCGAGCGACTGATGCGCGCCTATTACGGCT TCTATCAGCCATTGGAAGCCGTGCTGCAGGACAGCGACGCGATTCCCGCCGATTTTGATCTGGCTTCCCGCCTCAAGGCG CCGACCCTGCAACGCGATCTGCAAGCACTGGGCGCAAATGGTGGCGATTTTCCGATCTGCCGCCGGTTGCCCGCCATCGA TTCCGCCGCCGCCTGCCTGGGCGTGTTGTACGTGCTGGAAGGCGCAACCCTCGGCGGGCAGATCCTGCGCCGGGAAATCG CCACACGCCTGAGCCTTGGCGCGGACAACGGTGCAGCGTTTCTGGACATCTACGGCGCTGCCACCGGCCGTCGCTGGCGC GATTTCATCGAATACCTGGGCAGCCGCCCGATGGACGCCGACGAGCGTAAAGCCGTCGTGGCGGCCGCCCACACTACATT CAGTTGTTTCGAGCAGTGGCTCGAAAGTCAGGAGGTTCTGGTATGA
Upstream 100 bases:
>100_bases CCCATCTGCCGGGTCAGAAACTACCATTGCCGTGTAAGCTTTCGCGCCATGCTTCTCCATTCCCCTATGGCCCCAGGCGG CCCACTGTACGAGCGACTAC
Downstream 100 bases:
>100_bases ACCCGCAAGACAAAGAAGCCTTTGAAGAGTTGCTGGCCAACTGCGCCGACGAGCCGATCCGCTTTCCCGGCGCGATCCAG CCGCACGGTTTGCTGCTGAC
Product: Heme oxygenase
Products: NA
Alternate protein names: Heme Oxygenase-Like Protein; Bacteriophytochrome Heme Oxygenase BphO; Heme Oxygenase BphO; Haem Oxygenase-Like Protein; Iron-Starvation Protein PigA; Bacteriophytochrome Heme Oxygenase Bpho; Heme Oxygenase-Like; Heme Oxygenase Family Protein; Bacteriophytochrome Heme Oxygenase; Heme Oxygenase Bpho; Haem Oxygenase
Number of amino acids: Translated: 201; Mature: 201
Protein sequence:
>201_residues MQAKAREVHVPPVLQDLRAGTAELHIALEKRLPFFSDTLDLNAFERLMRAYYGFYQPLEAVLQDSDAIPADFDLASRLKA PTLQRDLQALGANGGDFPICRRLPAIDSAAACLGVLYVLEGATLGGQILRREIATRLSLGADNGAAFLDIYGAATGRRWR DFIEYLGSRPMDADERKAVVAAAHTTFSCFEQWLESQEVLV
Sequences:
>Translated_201_residues MQAKAREVHVPPVLQDLRAGTAELHIALEKRLPFFSDTLDLNAFERLMRAYYGFYQPLEAVLQDSDAIPADFDLASRLKA PTLQRDLQALGANGGDFPICRRLPAIDSAAACLGVLYVLEGATLGGQILRREIATRLSLGADNGAAFLDIYGAATGRRWR DFIEYLGSRPMDADERKAVVAAAHTTFSCFEQWLESQEVLV >Mature_201_residues MQAKAREVHVPPVLQDLRAGTAELHIALEKRLPFFSDTLDLNAFERLMRAYYGFYQPLEAVLQDSDAIPADFDLASRLKA PTLQRDLQALGANGGDFPICRRLPAIDSAAACLGVLYVLEGATLGGQILRREIATRLSLGADNGAAFLDIYGAATGRRWR DFIEYLGSRPMDADERKAVVAAAHTTFSCFEQWLESQEVLV
Specific function: Unknown
COG id: COG3230
COG function: function code P; Heme oxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22157; Mature: 22157
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQAKAREVHVPPVLQDLRAGTAELHIALEKRLPFFSDTLDLNAFERLMRAYYGFYQPLEA CCCCCCCCCCCHHHHHHHCCHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHHHHHH VLQDSDAIPADFDLASRLKAPTLQRDLQALGANGGDFPICRRLPAIDSAAACLGVLYVLE HHCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHCCCCCHHHHHHHHHHHHH GATLGGQILRREIATRLSLGADNGAAFLDIYGAATGRRWRDFIEYLGSRPMDADERKAVV CCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCHHHHHH AAAHTTFSCFEQWLESQEVLV HHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MQAKAREVHVPPVLQDLRAGTAELHIALEKRLPFFSDTLDLNAFERLMRAYYGFYQPLEA CCCCCCCCCCCHHHHHHHCCHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHHHHHH VLQDSDAIPADFDLASRLKAPTLQRDLQALGANGGDFPICRRLPAIDSAAACLGVLYVLE HHCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHCCCCCHHHHHHHHHHHHH GATLGGQILRREIATRLSLGADNGAAFLDIYGAATGRRWRDFIEYLGSRPMDADERKAVV CCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCHHHHHH AAAHTTFSCFEQWLESQEVLV HHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA