| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77458364
Identifier: 77458364
GI number: 77458364
Start: 2420058
End: 2421083
Strand: Reverse
Name: 77458364
Synonym: Pfl01_2137
Alternate gene names: NA
Gene position: 2421083-2420058 (Counterclockwise)
Preceding gene: 77458365
Following gene: 77458362
Centisome position: 37.6
GC content: 63.55
Gene sequence:
>1026_bases ATGCCTATTGAGCGCAGCGTTCCGGCGCAACGGGCCTTGCGCCTGGCTTGCGGCACGGCGTTGTGCACCGCCGCCAGTTA CGGCCTCGCCTTGCCGCTGTCGTTTTTGTCTCCAGTGCTCGCGGTGTTGCTGCTGGCCAGCATGCCTCGGCCGTTGCCGG TGAAAATGGCGCTGGTGCTGACGTTGGTCGCCGCATTCACCACCAGCCTCGGCCTGTTGCTGGTGCCGTTGCTGCGTTAT TACCCGGTGTGCGGCGTGCTGTTGATCGCTATTGGGCTGTTTCTGGTGTTCACCTACGGCTTGCGCGGCGGCAACGTGCT GATCATGACGTTTCTGGTGATCGGCATGACCATGATCTCCGCCGCCGGTTTCGCCTCATTCGAGCTGGCGATGGCGGTGA TCGGCGCGCTGGTCAAAGGCCTGTTGCTGGCCGTCGTCATCGTCGGCCTGAGCCACGTCCTGTTCCCGGAACCGGCCAAC AGCCCCGCGCCACCACCCGCTCCCGCCCTGCCCGCCGAAGACCTGCCCCGCGTGGCGATGCGCGCAACATTGATCGTGCT GCCGACCTTCCTGCTGGTGCTGATCGACCCGGCCAGCTACCTGCCGATCATCCTCAAAGCCGTCAGCCTCGGCCAACAGA GCACCACCACCCGCACCCATCACGCCGGGCGCGAATTGCTCGGCTCGACCTTATTGGGCGGGCTGCTGGCGGTGCTGTTC TGGTGCGCGTTGAGCCTGTTCGTGCACCTGTGGATGTTCTTTCTGTGGATGCTGCTGTTCGGGCTGTTTATGGCACGCAA ACTCTATCGGCTACACCCCACGCAACTCACGCCGGGGTTCTGGCTCAACACCCTGATCACCATGATCATTCTGCTCGGCC AGTCGGTGGAGGACAGTGCAGCGGGCAAAGACGTCTACACCGCCTTCGCGGTGCGCATGGGGTTGTTCATTCTGGTGACG CTCTACAGCGGCCTGATGATGCACCTGCTCGTCGCACACCGGGAAAACCGTCAGGGCGTGACCTGA
Upstream 100 bases:
>100_bases CGCGCTGGCGGGCAGGCGGAAGTCATGGCGTTTCCGAGCGAGGGCAATCTGCTCAATCCACTCGGGCGGATGTTTGTCTG GTTGATGAGTTGGCTGTCGT
Downstream 100 bases:
>100_bases TAACCCCGCCCTTGCAGGCAACCGGTGTAGGCGCTTGAACTGGCTGAAGCATCGGTCCGCCGCTGCTCGCGCCGATCCTG CCGCTGCCGCGCACCGCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 341; Mature: 340
Protein sequence:
>341_residues MPIERSVPAQRALRLACGTALCTAASYGLALPLSFLSPVLAVLLLASMPRPLPVKMALVLTLVAAFTTSLGLLLVPLLRY YPVCGVLLIAIGLFLVFTYGLRGGNVLIMTFLVIGMTMISAAGFASFELAMAVIGALVKGLLLAVVIVGLSHVLFPEPAN SPAPPPAPALPAEDLPRVAMRATLIVLPTFLLVLIDPASYLPIILKAVSLGQQSTTTRTHHAGRELLGSTLLGGLLAVLF WCALSLFVHLWMFFLWMLLFGLFMARKLYRLHPTQLTPGFWLNTLITMIILLGQSVEDSAAGKDVYTAFAVRMGLFILVT LYSGLMMHLLVAHRENRQGVT
Sequences:
>Translated_341_residues MPIERSVPAQRALRLACGTALCTAASYGLALPLSFLSPVLAVLLLASMPRPLPVKMALVLTLVAAFTTSLGLLLVPLLRY YPVCGVLLIAIGLFLVFTYGLRGGNVLIMTFLVIGMTMISAAGFASFELAMAVIGALVKGLLLAVVIVGLSHVLFPEPAN SPAPPPAPALPAEDLPRVAMRATLIVLPTFLLVLIDPASYLPIILKAVSLGQQSTTTRTHHAGRELLGSTLLGGLLAVLF WCALSLFVHLWMFFLWMLLFGLFMARKLYRLHPTQLTPGFWLNTLITMIILLGQSVEDSAAGKDVYTAFAVRMGLFILVT LYSGLMMHLLVAHRENRQGVT >Mature_340_residues PIERSVPAQRALRLACGTALCTAASYGLALPLSFLSPVLAVLLLASMPRPLPVKMALVLTLVAAFTTSLGLLLVPLLRYY PVCGVLLIAIGLFLVFTYGLRGGNVLIMTFLVIGMTMISAAGFASFELAMAVIGALVKGLLLAVVIVGLSHVLFPEPANS PAPPPAPALPAEDLPRVAMRATLIVLPTFLLVLIDPASYLPIILKAVSLGQQSTTTRTHHAGRELLGSTLLGGLLAVLFW CALSLFVHLWMFFLWMLLFGLFMARKLYRLHPTQLTPGFWLNTLITMIILLGQSVEDSAAGKDVYTAFAVRMGLFILVTL YSGLMMHLLVAHRENRQGVT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36716; Mature: 36585
Theoretical pI: Translated: 9.98; Mature: 9.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIERSVPAQRALRLACGTALCTAASYGLALPLSFLSPVLAVLLLASMPRPLPVKMALVL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH TLVAAFTTSLGLLLVPLLRYYPVCGVLLIAIGLFLVFTYGLRGGNVLIMTFLVIGMTMIS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH AAGFASFELAMAVIGALVKGLLLAVVIVGLSHVLFPEPANSPAPPPAPALPAEDLPRVAM HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHH RATLIVLPTFLLVLIDPASYLPIILKAVSLGQQSTTTRTHHAGRELLGSTLLGGLLAVLF HHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH WCALSLFVHLWMFFLWMLLFGLFMARKLYRLHPTQLTPGFWLNTLITMIILLGQSVEDSA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCHHH AGKDVYTAFAVRMGLFILVTLYSGLMMHLLVAHRENRQGVT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure PIERSVPAQRALRLACGTALCTAASYGLALPLSFLSPVLAVLLLASMPRPLPVKMALVL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH TLVAAFTTSLGLLLVPLLRYYPVCGVLLIAIGLFLVFTYGLRGGNVLIMTFLVIGMTMIS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH AAGFASFELAMAVIGALVKGLLLAVVIVGLSHVLFPEPANSPAPPPAPALPAEDLPRVAM HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHH RATLIVLPTFLLVLIDPASYLPIILKAVSLGQQSTTTRTHHAGRELLGSTLLGGLLAVLF HHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH WCALSLFVHLWMFFLWMLLFGLFMARKLYRLHPTQLTPGFWLNTLITMIILLGQSVEDSA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCHHH AGKDVYTAFAVRMGLFILVTLYSGLMMHLLVAHRENRQGVT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA