| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is rstB [H]
Identifier: 77458312
GI number: 77458312
Start: 2371944
End: 2373248
Strand: Reverse
Name: rstB [H]
Synonym: Pfl01_2085
Alternate gene names: 77458312
Gene position: 2373248-2371944 (Counterclockwise)
Preceding gene: 77458313
Following gene: 77458311
Centisome position: 36.86
GC content: 62.99
Gene sequence:
>1305_bases ATGAATGTCGCCCTGCGCTGGCCGCGCACCCTCGCCTCCCGCTTGTCGCTGATTTTCCTGATCGGGCTGATCCTCGCTCA GGCGCTGTCGTTCGGCGCGCAATATTACGAGCGCTACGAAAGCGCGAAAAACACCATGCTCGGCAACCTCGAAACCGACG TCTCGACCTCGATTGCCATTCTTGATCGTCTGCCCGCCGAAGAACGCCCGATGTGGCTCAAACGCCTGGCGCGCAAGAAC TACGGTTATCTGCTGAGCGAAGGCGAACCGGGCACGCCGCTGGACCCGCAGGACGTACCGATTGCCGTCACCTCGATTAC CGACGCAATTGGCGAGGCCTATCCGCTGACGTTCACCGATATTCCCGGCCCGATAAAACACTTTCAAGGCCACCTGCGCC TGAGCGACGGTAGCCCGGTGACCATCGATGTGCGCCCGTCGATGGTGCCGCTGTCGCCGTGGCTGCCGGTGGTGTTACTC GGGCAACTGGCGCTGATGCTCGCCTGCACCTGGCTGGCGGTGCGTATCGCCATCCGCCCCCTCACCCGTCTCGCCAACGC GGTGGAAACCCTCGATCCCAACGCGCACCCGATCAACCTCGACGAAAAAGGCCCGAACGAAGTGGCTTACGCCGCCCGCG CTTTCAACTCGATGCAGGCGCGCATCGCCGCGTACCTCAAAGAACGCATGCAACTGCTGGCGGCGATTTCCCACGACCTG CAAACCCCGATCACCCGCATGAAGCTGCGGGCGGAGTTCATGGACGATTCAGCCGAGAAAGACAAACTGTGGAACGACCT CGGTGAGATGGAGCATCTGGTGCGCGAAGGTGTGGCCTACGCCCGCAGCATCCACGGCTCGACTGAAGAAAGCCGACGCA CCAATCTGGACTCGTTCCTCGACAGCCTGGTGTTCGACTATCAGGACATGGGTAAGGAAGTGCAGTTGAGCGGCAAGAGT GACGCGGTCATCGACACCCGCCCCCACGCGTTGCGCCGGGTGCTGGTCAACCTGACCGACAACGCGCTGAAGTTCGCCGG GGCTGCCGAGCTGCTGATTCAACGCGACAAGAGCGGCCTGTCGATCAAGGTCATGGATCGCGGCCCGGGCATCGCCGAAG AAGAGCTGGCCCAGGTGATGGAGCCTTTCTACCGCGTGGAAAACTCGCGCAACCGCAGCACCGGCGGCACCGGGCTGGGG CTGGCGATCGCCCAGCAACTGGCGCTGGCGCTGGGCGGTTCGCTGACGCTGAGCAATCGCGAAGGTGGCGGGTTGTGTGC GGAGCTGAAACTGCCATTGAGCTGA
Upstream 100 bases:
>100_bases AGCGCCTGCTGGATGACGCCCGTGAACCGGCCTACATCAAGACCGTGCGCAGCGAAGGCTATGTGTTCTCGTTGCCGGTC GAAGTCCTCGGAGCCCCCGC
Downstream 100 bases:
>100_bases GCACCAGCGGTCGCTACTGTCAGATCTGACAGTAGCCGGCCAGGCAGAATTATTGTGGGATGACACCTCGCTCAGCCGTC GCGTGGTGAACCATGTCTCT
Product: periplasmic sensor Signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 434; Mature: 434
Protein sequence:
>434_residues MNVALRWPRTLASRLSLIFLIGLILAQALSFGAQYYERYESAKNTMLGNLETDVSTSIAILDRLPAEERPMWLKRLARKN YGYLLSEGEPGTPLDPQDVPIAVTSITDAIGEAYPLTFTDIPGPIKHFQGHLRLSDGSPVTIDVRPSMVPLSPWLPVVLL GQLALMLACTWLAVRIAIRPLTRLANAVETLDPNAHPINLDEKGPNEVAYAARAFNSMQARIAAYLKERMQLLAAISHDL QTPITRMKLRAEFMDDSAEKDKLWNDLGEMEHLVREGVAYARSIHGSTEESRRTNLDSFLDSLVFDYQDMGKEVQLSGKS DAVIDTRPHALRRVLVNLTDNALKFAGAAELLIQRDKSGLSIKVMDRGPGIAEEELAQVMEPFYRVENSRNRSTGGTGLG LAIAQQLALALGGSLTLSNREGGGLCAELKLPLS
Sequences:
>Translated_434_residues MNVALRWPRTLASRLSLIFLIGLILAQALSFGAQYYERYESAKNTMLGNLETDVSTSIAILDRLPAEERPMWLKRLARKN YGYLLSEGEPGTPLDPQDVPIAVTSITDAIGEAYPLTFTDIPGPIKHFQGHLRLSDGSPVTIDVRPSMVPLSPWLPVVLL GQLALMLACTWLAVRIAIRPLTRLANAVETLDPNAHPINLDEKGPNEVAYAARAFNSMQARIAAYLKERMQLLAAISHDL QTPITRMKLRAEFMDDSAEKDKLWNDLGEMEHLVREGVAYARSIHGSTEESRRTNLDSFLDSLVFDYQDMGKEVQLSGKS DAVIDTRPHALRRVLVNLTDNALKFAGAAELLIQRDKSGLSIKVMDRGPGIAEEELAQVMEPFYRVENSRNRSTGGTGLG LAIAQQLALALGGSLTLSNREGGGLCAELKLPLS >Mature_434_residues MNVALRWPRTLASRLSLIFLIGLILAQALSFGAQYYERYESAKNTMLGNLETDVSTSIAILDRLPAEERPMWLKRLARKN YGYLLSEGEPGTPLDPQDVPIAVTSITDAIGEAYPLTFTDIPGPIKHFQGHLRLSDGSPVTIDVRPSMVPLSPWLPVVLL GQLALMLACTWLAVRIAIRPLTRLANAVETLDPNAHPINLDEKGPNEVAYAARAFNSMQARIAAYLKERMQLLAAISHDL QTPITRMKLRAEFMDDSAEKDKLWNDLGEMEHLVREGVAYARSIHGSTEESRRTNLDSFLDSLVFDYQDMGKEVQLSGKS DAVIDTRPHALRRVLVNLTDNALKFAGAAELLIQRDKSGLSIKVMDRGPGIAEEELAQVMEPFYRVENSRNRSTGGTGLG LAIAQQLALALGGSLTLSNREGGGLCAELKLPLS
Specific function: Member of the two-component regulatory system rstB/rstA. RstB functions as a membrane-associated protein kinase that phosphorylates rstA (Potential) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1787894, Length=231, Percent_Identity=35.0649350649351, Blast_Score=119, Evalue=4e-28, Organism=Escherichia coli, GI1789808, Length=278, Percent_Identity=29.8561151079137, Blast_Score=119, Evalue=5e-28, Organism=Escherichia coli, GI1790346, Length=268, Percent_Identity=29.1044776119403, Blast_Score=109, Evalue=3e-25, Organism=Escherichia coli, GI1788393, Length=269, Percent_Identity=25.2788104089219, Blast_Score=86, Evalue=4e-18, Organism=Escherichia coli, GI1786783, Length=277, Percent_Identity=27.0758122743682, Blast_Score=86, Evalue=5e-18, Organism=Escherichia coli, GI1790861, Length=300, Percent_Identity=26.6666666666667, Blast_Score=85, Evalue=7e-18, Organism=Escherichia coli, GI87082128, Length=301, Percent_Identity=24.9169435215947, Blast_Score=75, Evalue=1e-14, Organism=Escherichia coli, GI1789149, Length=234, Percent_Identity=27.7777777777778, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1786912, Length=233, Percent_Identity=30.9012875536481, Blast_Score=74, Evalue=3e-14, Organism=Escherichia coli, GI87081816, Length=225, Percent_Identity=30.6666666666667, Blast_Score=73, Evalue=3e-14, Organism=Escherichia coli, GI145693157, Length=108, Percent_Identity=36.1111111111111, Blast_Score=72, Evalue=6e-14, Organism=Escherichia coli, GI1789403, Length=298, Percent_Identity=25.503355704698, Blast_Score=71, Evalue=1e-13, Organism=Escherichia coli, GI1790551, Length=276, Percent_Identity=25.3623188405797, Blast_Score=70, Evalue=3e-13, Organism=Escherichia coli, GI1786600, Length=285, Percent_Identity=25.6140350877193, Blast_Score=70, Evalue=4e-13, Organism=Escherichia coli, GI48994928, Length=229, Percent_Identity=27.0742358078603, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1790436, Length=220, Percent_Identity=25, Blast_Score=62, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 47753; Mature: 47753
Theoretical pI: Translated: 5.96; Mature: 5.96
Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVALRWPRTLASRLSLIFLIGLILAQALSFGAQYYERYESAKNTMLGNLETDVSTSIAI CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH LDRLPAEERPMWLKRLARKNYGYLLSEGEPGTPLDPQDVPIAVTSITDAIGEAYPLTFTD HHHCCCCCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCCCEEHHHHHHHHCCCCCEEECC IPGPIKHFQGHLRLSDGSPVTIDVRPSMVPLSPWLPVVLLGQLALMLACTWLAVRIAIRP CCCHHHHCCCCEEECCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LTRLANAVETLDPNAHPINLDEKGPNEVAYAARAFNSMQARIAAYLKERMQLLAAISHDL HHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QTPITRMKLRAEFMDDSAEKDKLWNDLGEMEHLVREGVAYARSIHGSTEESRRTNLDSFL HCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHH DSLVFDYQDMGKEVQLSGKSDAVIDTRPHALRRVLVNLTDNALKFAGAAELLIQRDKSGL HHHHHHHHHCCCEEEECCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC SIKVMDRGPGIAEEELAQVMEPFYRVENSRNRSTGGTGLGLAIAQQLALALGGSLTLSNR EEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCEEECCC EGGGLCAELKLPLS CCCCEEEEEECCCC >Mature Secondary Structure MNVALRWPRTLASRLSLIFLIGLILAQALSFGAQYYERYESAKNTMLGNLETDVSTSIAI CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH LDRLPAEERPMWLKRLARKNYGYLLSEGEPGTPLDPQDVPIAVTSITDAIGEAYPLTFTD HHHCCCCCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCCCEEHHHHHHHHCCCCCEEECC IPGPIKHFQGHLRLSDGSPVTIDVRPSMVPLSPWLPVVLLGQLALMLACTWLAVRIAIRP CCCHHHHCCCCEEECCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LTRLANAVETLDPNAHPINLDEKGPNEVAYAARAFNSMQARIAAYLKERMQLLAAISHDL HHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QTPITRMKLRAEFMDDSAEKDKLWNDLGEMEHLVREGVAYARSIHGSTEESRRTNLDSFL HCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHH DSLVFDYQDMGKEVQLSGKSDAVIDTRPHALRRVLVNLTDNALKFAGAAELLIQRDKSGL HHHHHHHHHCCCEEEECCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC SIKVMDRGPGIAEEELAQVMEPFYRVENSRNRSTGGTGLGLAIAQQLALALGGSLTLSNR EEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCEEECCC EGGGLCAELKLPLS CCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9097039; 9278503; 2646639; 1925016; 1495392 [H]