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The map label for this gene is lpsJ [H]

Identifier: 77458302

GI number: 77458302

Start: 2360605

End: 2361270

Strand: Reverse

Name: lpsJ [H]

Synonym: Pfl01_2075

Alternate gene names: 77458302

Gene position: 2361270-2360605 (Counterclockwise)

Preceding gene: 77458303

Following gene: 77458301

Centisome position: 36.67

GC content: 60.51

Gene sequence:

>666_bases
ATGGCACTTACCCGCGAACAAATGGCTCAACGCGTCGCCCGCGAAATGCAGGACGGCTACTACGTTAACCTCGGCATCGG
CATTCCGACCCTGGTCGCCAACTACATCCCCGAAGGCATGGAAGTCATGCTGCAATCGGAAAACGGCCTGCTCGGCATGG
GCCCTTTCCCGACTGAAGACACCATCGACGCCGACATGATCAACGCCGGCAAGCAAACCGTAACTGCGCGCATCGGCGCA
TCGATTTTCAACTCCGCCGAGTCCTTCGCCATGATCCGCGGCGGCCACGTCGACCTGACCGTGCTCGGCGCCTTCGAAGT
GGACGTGCAAGGCAACATCGCCTCGTGGATGATCCCGGGCAAACTGGTCAAGGGCATGGGCGGCGCGATGGACCTGGTGG
CCGGCGCCGACAACATCATCGTGATCATGACCCACGCGTCCAAGGACGGTGAGTCCAAGTTGCTGAGCCAATGCAGCCTG
CCGCTGACCGGCGCCGGTTGCATCAAGCGCGTGCTGACTGACCTTGCGTACCTGGAAATCGAAAATGGCGCTTTTGTCCT
CAAGGAACGCGCACCTGGCGTCAGCGTCGAGGAAATCGTCGCCAAAACCGCTGGTAAACTGATCGTCCCGGATCACGTAC
CGGAAATGCAGTTCGCTGCCGAGTGA

Upstream 100 bases:

>100_bases
GCCCGGCATCTACGTCGACCGGGTCATTTGCGGCACGTTCGAAAAACGCATCGAACAACGCACCATCCGCAAATAATCCA
GGCTGACGGAGAACAAGAAC

Downstream 100 bases:

>100_bases
GGAATTCGAATATGCAAGACGTCGTCATTGTTGCCGCCACGCGTACCGCGATCGGCAGTTTCCAGGGATCGCTGGCCAGC
GTCTCCGCCGTGGATCTGGG

Product: butyryl-CoA:acetate CoA transferase

Products: NA

Alternate protein names: OXCT B; Succinyl CoA:3-oxoacid CoA-transferase [H]

Number of amino acids: Translated: 221; Mature: 220

Protein sequence:

>221_residues
MALTREQMAQRVAREMQDGYYVNLGIGIPTLVANYIPEGMEVMLQSENGLLGMGPFPTEDTIDADMINAGKQTVTARIGA
SIFNSAESFAMIRGGHVDLTVLGAFEVDVQGNIASWMIPGKLVKGMGGAMDLVAGADNIIVIMTHASKDGESKLLSQCSL
PLTGAGCIKRVLTDLAYLEIENGAFVLKERAPGVSVEEIVAKTAGKLIVPDHVPEMQFAAE

Sequences:

>Translated_221_residues
MALTREQMAQRVAREMQDGYYVNLGIGIPTLVANYIPEGMEVMLQSENGLLGMGPFPTEDTIDADMINAGKQTVTARIGA
SIFNSAESFAMIRGGHVDLTVLGAFEVDVQGNIASWMIPGKLVKGMGGAMDLVAGADNIIVIMTHASKDGESKLLSQCSL
PLTGAGCIKRVLTDLAYLEIENGAFVLKERAPGVSVEEIVAKTAGKLIVPDHVPEMQFAAE
>Mature_220_residues
ALTREQMAQRVAREMQDGYYVNLGIGIPTLVANYIPEGMEVMLQSENGLLGMGPFPTEDTIDADMINAGKQTVTARIGAS
IFNSAESFAMIRGGHVDLTVLGAFEVDVQGNIASWMIPGKLVKGMGGAMDLVAGADNIIVIMTHASKDGESKLLSQCSLP
LTGAGCIKRVLTDLAYLEIENGAFVLKERAPGVSVEEIVAKTAGKLIVPDHVPEMQFAAE

Specific function: SHORT-CHAIN FATTY ACIDS METABOLISM. [C]

COG id: COG2057

COG function: function code I; Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 3-oxoacid CoA-transferase subunit B family [H]

Homologues:

Organism=Homo sapiens, GI11545841, Length=218, Percent_Identity=49.0825688073394, Blast_Score=219, Evalue=1e-57,
Organism=Homo sapiens, GI4557817, Length=218, Percent_Identity=50, Blast_Score=219, Evalue=1e-57,
Organism=Escherichia coli, GI1788552, Length=205, Percent_Identity=47.8048780487805, Blast_Score=207, Evalue=3e-55,
Organism=Caenorhabditis elegans, GI17531517, Length=216, Percent_Identity=53.7037037037037, Blast_Score=226, Evalue=9e-60,
Organism=Drosophila melanogaster, GI21358325, Length=214, Percent_Identity=57.0093457943925, Blast_Score=251, Evalue=3e-67,
Organism=Drosophila melanogaster, GI24655794, Length=214, Percent_Identity=57.0093457943925, Blast_Score=250, Evalue=5e-67,

Paralogues:

None

Copy number: 369 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012791
- InterPro:   IPR004165
- InterPro:   IPR004164 [H]

Pfam domain/function: PF01144 CoA_trans [H]

EC number: =2.8.3.5 [H]

Molecular weight: Translated: 23470; Mature: 23338

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: PS01274 COA_TRANSF_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALTREQMAQRVAREMQDGYYVNLGIGIPTLVANYIPEGMEVMLQSENGLLGMGPFPTED
CCCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHCCCCCEEEEECCCCEEECCCCCCCC
TIDADMINAGKQTVTARIGASIFNSAESFAMIRGGHVDLTVLGAFEVDVQGNIASWMIPG
CCCHHHHHCCCHHHHHHHHHHHHHCHHHEEEEECCCEEEEEEEEEEEEECCCEEEEECCH
KLVKGMGGAMDLVAGADNIIVIMTHASKDGESKLLSQCSLPLTGAGCIKRVLTDLAYLEI
HHHHCCCCHHHHHCCCCCEEEEEEECCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHEEEE
ENGAFVLKERAPGVSVEEIVAKTAGKLIVPDHVPEMQFAAE
CCCEEEEEECCCCCCHHHHHHHHCCCEECCCCCCCCCCCCC
>Mature Secondary Structure 
ALTREQMAQRVAREMQDGYYVNLGIGIPTLVANYIPEGMEVMLQSENGLLGMGPFPTED
CCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHCCCCCEEEEECCCCEEECCCCCCCC
TIDADMINAGKQTVTARIGASIFNSAESFAMIRGGHVDLTVLGAFEVDVQGNIASWMIPG
CCCHHHHHCCCHHHHHHHHHHHHHCHHHEEEEECCCEEEEEEEEEEEEECCCEEEEECCH
KLVKGMGGAMDLVAGADNIIVIMTHASKDGESKLLSQCSLPLTGAGCIKRVLTDLAYLEI
HHHHCCCCHHHHHCCCCCEEEEEEECCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHEEEE
ENGAFVLKERAPGVSVEEIVAKTAGKLIVPDHVPEMQFAAE
CCCEEEEEECCCCCCHHHHHHHHCCCEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9385134 [H]