| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77458300
Identifier: 77458300
GI number: 77458300
Start: 2358692
End: 2359294
Strand: Direct
Name: 77458300
Synonym: Pfl01_2073
Alternate gene names: NA
Gene position: 2358692-2359294 (Clockwise)
Preceding gene: 77458298
Following gene: 77458304
Centisome position: 36.63
GC content: 63.85
Gene sequence:
>603_bases ATGAGCACTATCGGAATCATCGGCGCTGGCGCCATTGGTTCAGCGTTTGCCAAAGCCTTGTCGCGTCAGGGCATCCCGTT GGTCATCGCCAACAGTCGCGGGCCGGAGACCCTGGCTGAACTGGTCGCAGAACTCGGCCCGACCGCTCGCGCCGTTACCC GTGAAGAAGCCGCCGCCCAGGACATCGTGCTGGTCGCGGTGAACTGGTCGAAACTGCCAACCGCACTGGCCGGTCTGCCG GACTTCGGCGGGCGGATTGTCATCGACGCCAACAATTCGATTGAAGCGCCGTCGTTCAAACCGGTGGATTTGCAGGGGCG GCCGTCCAGCGAAGTGTTCGCCGAATGGGTGCCGGGGGCGCGGGTGGTCAAGGCGTTCAACCACTTGCTGGCGCGTTTGC TGGAAGCGGATCCGGCGTCGGAGGGCGGCAAGCGCGTGCTGTTCCTGTCCGGGGATGACGCTCAGGCCAAGGCTGAAGTG GGTGCGTTGATCGATCAGCTCGGTTTCTTCGGTATCGATCTGGGCGAGCTGAGCGTGGGTGCGCGACTGGTGCAGTTCCC CGGCGGACCATTGCCGGTGCTGAATCTGGTGAAGTTCGCCTGA
Upstream 100 bases:
>100_bases AGCGATGCTTGAAGATCATTCAAGGCATTACCGGCTAATCAAGTGGGAATGGCAAGCGCAAGATTCGCTTCGAGTCTTAC CCCACTTTGAGGAGAACACC
Downstream 100 bases:
>100_bases CGGCCGGGCAAAAAAATACCCGGTGCGACGTGAGTCGTACCGGGTTTTGTTGCCAACGGGCAGTGGATGTCGTGGATCCG CCGTCCGCTGTGAACTCGCT
Product: NADP oxidoreductase, coenzyme F420-dependent
Products: NA
Alternate protein names: Oxidoreductase; 2-Dehydropantoate 2-Reductase; Myo-Inositol 2-Dehydrogenase Protein; Polyketide Synthase
Number of amino acids: Translated: 200; Mature: 199
Protein sequence:
>200_residues MSTIGIIGAGAIGSAFAKALSRQGIPLVIANSRGPETLAELVAELGPTARAVTREEAAAQDIVLVAVNWSKLPTALAGLP DFGGRIVIDANNSIEAPSFKPVDLQGRPSSEVFAEWVPGARVVKAFNHLLARLLEADPASEGGKRVLFLSGDDAQAKAEV GALIDQLGFFGIDLGELSVGARLVQFPGGPLPVLNLVKFA
Sequences:
>Translated_200_residues MSTIGIIGAGAIGSAFAKALSRQGIPLVIANSRGPETLAELVAELGPTARAVTREEAAAQDIVLVAVNWSKLPTALAGLP DFGGRIVIDANNSIEAPSFKPVDLQGRPSSEVFAEWVPGARVVKAFNHLLARLLEADPASEGGKRVLFLSGDDAQAKAEV GALIDQLGFFGIDLGELSVGARLVQFPGGPLPVLNLVKFA >Mature_199_residues STIGIIGAGAIGSAFAKALSRQGIPLVIANSRGPETLAELVAELGPTARAVTREEAAAQDIVLVAVNWSKLPTALAGLPD FGGRIVIDANNSIEAPSFKPVDLQGRPSSEVFAEWVPGARVVKAFNHLLARLLEADPASEGGKRVLFLSGDDAQAKAEVG ALIDQLGFFGIDLGELSVGARLVQFPGGPLPVLNLVKFA
Specific function: Unknown
COG id: COG2085
COG function: function code R; Predicted dinucleotide-binding enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI56549145, Length=193, Percent_Identity=32.1243523316062, Blast_Score=71, Evalue=6e-13, Organism=Homo sapiens, GI59853425, Length=193, Percent_Identity=32.1243523316062, Blast_Score=71, Evalue=6e-13, Organism=Homo sapiens, GI56549147, Length=193, Percent_Identity=32.1243523316062, Blast_Score=71, Evalue=6e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20687; Mature: 20556
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTIGIIGAGAIGSAFAKALSRQGIPLVIANSRGPETLAELVAELGPTARAVTREEAAAQ CCCEEEEECCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHC DIVLVAVNWSKLPTALAGLPDFGGRIVIDANNSIEAPSFKPVDLQGRPSSEVFAEWVPGA CEEEEEECCHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHCCCH RVVKAFNHLLARLLEADPASEGGKRVLFLSGDDAQAKAEVGALIDQLGFFGIDLGELSVG HHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHC ARLVQFPGGPLPVLNLVKFA EEEEECCCCCHHHHHHHHCC >Mature Secondary Structure STIGIIGAGAIGSAFAKALSRQGIPLVIANSRGPETLAELVAELGPTARAVTREEAAAQ CCEEEEECCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHC DIVLVAVNWSKLPTALAGLPDFGGRIVIDANNSIEAPSFKPVDLQGRPSSEVFAEWVPGA CEEEEEECCHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHCCCH RVVKAFNHLLARLLEADPASEGGKRVLFLSGDDAQAKAEVGALIDQLGFFGIDLGELSVG HHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHC ARLVQFPGGPLPVLNLVKFA EEEEECCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA