| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77458239
Identifier: 77458239
GI number: 77458239
Start: 2293633
End: 2294322
Strand: Reverse
Name: 77458239
Synonym: Pfl01_2012
Alternate gene names: NA
Gene position: 2294322-2293633 (Counterclockwise)
Preceding gene: 77458240
Following gene: 77458238
Centisome position: 35.63
GC content: 60.29
Gene sequence:
>690_bases ATGAATGTTTTGCAAAAAATCCGCGATCACATCAAACACAAAGGCCTGCGGGCCACCTTGGCCAAGGTGTGGAAACACTA CGTCTTTTCTCATCAGGAACTGCTGTGGATGGAGCGCGACCTTGTCAGTCCGGTGCCACCCCACAGCCTCAAGCCCTATC CGCCACTGCGGGTGGTGAAGATCACCCCGGACAACGTCAGCGCCTTCGCCCGCCACTTCGGCGACCGCGTGGGCACCATG GCTGAACTCGCCCGGGAACATCACACCGGGCACATGCACCTGGACGATCAGGGCCATGCGGTGGCCTTCATCTGGGGCAC CGCTCAAGACTATTTCGACCGGCACTACTACGGCTGCCTGTTCCCGGTGAAACCCGGTGAGTTCTTCGAATTCGGCGGCG AACTGACCCGTGCCTACTGGGGCACCGAACTGTCGGTGGATCTGCAACTGGAACTGTGGAAAGCCATGGCCGCCCAGGGC TGTGACAAGGTCGTGGACGTCTGCGAGTTCCACAACATCCCGGCGCTCAAGCTGCATCTGCGCATGGGCTATACCGAACA GGGCCGGATCATGAATGTGTATGAGTTGTTCGGTCGCTGGCGCTTCTATCGCGAAACCCGCTACAGCGGCTCGCGCCTGG ACGCGTTGCGCAAACCTTCCCGTCCACCTGTCACAGCAACGGCGACCTGA
Upstream 100 bases:
>100_bases ACCCTGTTTGCCCTGCGCTGGAGCGCCTCATGACCGCCCCGTTGATGTCCGGCCGCGCTGGCCTGTGCCGCGCGATGACT CGTCATCAGGAGCCACGACC
Downstream 100 bases:
>100_bases GCCTATGGCGCAATTCGAATGGCGCACCTCGTTGTGCGCACCCGACTTCCCGGCGGCGGCCTATGAAGCGCTGCGCCTGC GGGTGACGGATCACACGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 229; Mature: 229
Protein sequence:
>229_residues MNVLQKIRDHIKHKGLRATLAKVWKHYVFSHQELLWMERDLVSPVPPHSLKPYPPLRVVKITPDNVSAFARHFGDRVGTM AELAREHHTGHMHLDDQGHAVAFIWGTAQDYFDRHYYGCLFPVKPGEFFEFGGELTRAYWGTELSVDLQLELWKAMAAQG CDKVVDVCEFHNIPALKLHLRMGYTEQGRIMNVYELFGRWRFYRETRYSGSRLDALRKPSRPPVTATAT
Sequences:
>Translated_229_residues MNVLQKIRDHIKHKGLRATLAKVWKHYVFSHQELLWMERDLVSPVPPHSLKPYPPLRVVKITPDNVSAFARHFGDRVGTM AELAREHHTGHMHLDDQGHAVAFIWGTAQDYFDRHYYGCLFPVKPGEFFEFGGELTRAYWGTELSVDLQLELWKAMAAQG CDKVVDVCEFHNIPALKLHLRMGYTEQGRIMNVYELFGRWRFYRETRYSGSRLDALRKPSRPPVTATAT >Mature_229_residues MNVLQKIRDHIKHKGLRATLAKVWKHYVFSHQELLWMERDLVSPVPPHSLKPYPPLRVVKITPDNVSAFARHFGDRVGTM AELAREHHTGHMHLDDQGHAVAFIWGTAQDYFDRHYYGCLFPVKPGEFFEFGGELTRAYWGTELSVDLQLELWKAMAAQG CDKVVDVCEFHNIPALKLHLRMGYTEQGRIMNVYELFGRWRFYRETRYSGSRLDALRKPSRPPVTATAT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26591; Mature: 26591
Theoretical pI: Translated: 9.27; Mature: 9.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVLQKIRDHIKHKGLRATLAKVWKHYVFSHQELLWMERDLVSPVPPHSLKPYPPLRVVK CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEE ITPDNVSAFARHFGDRVGTMAELAREHHTGHMHLDDQGHAVAFIWGTAQDYFDRHYYGCL ECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEEEEECCHHHHHHHCCCEEE FPVKPGEFFEFGGELTRAYWGTELSVDLQLELWKAMAAQGCDKVVDVCEFHNIPALKLHL EECCCCHHHHHCCHHHHHHCCCEEEEEHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEE RMGYTEQGRIMNVYELFGRWRFYRETRYSGSRLDALRKPSRPPVTATAT EECCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCEEECCC >Mature Secondary Structure MNVLQKIRDHIKHKGLRATLAKVWKHYVFSHQELLWMERDLVSPVPPHSLKPYPPLRVVK CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEE ITPDNVSAFARHFGDRVGTMAELAREHHTGHMHLDDQGHAVAFIWGTAQDYFDRHYYGCL ECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEEEEECCHHHHHHHCCCEEE FPVKPGEFFEFGGELTRAYWGTELSVDLQLELWKAMAAQGCDKVVDVCEFHNIPALKLHL EECCCCHHHHHCCHHHHHHCCCEEEEEHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEE RMGYTEQGRIMNVYELFGRWRFYRETRYSGSRLDALRKPSRPPVTATAT EECCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA