| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77458238
Identifier: 77458238
GI number: 77458238
Start: 2292441
End: 2293628
Strand: Reverse
Name: 77458238
Synonym: Pfl01_2011
Alternate gene names: NA
Gene position: 2293628-2292441 (Counterclockwise)
Preceding gene: 77458239
Following gene: 77458237
Centisome position: 35.62
GC content: 64.9
Gene sequence:
>1188_bases ATGGCGCAATTCGAATGGCGCACCTCGTTGTGCGCACCCGACTTCCCGGCGGCGGCCTATGAAGCGCTGCGCCTGCGGGT GACGGATCACACGCCGTTCAACAGCCTCGACTGGCTGGGTGCGGCAGAGCAGACGCTCGACACGCACGACCGCCTGCACA TTTTGCTGGGTTGGGAAGCGGACGAATTGCGCCTGTGCCTGCCGCTGGTGACAAGCCGTGAACGGTTTTTCGGATTGCCA TTTCGGGTGGTGCATCACCTGGGTTATCCGCTGGCCGATCGCCTGGCGTTGTTATCACGGCTGGGCGCCGACGATATGCG CCAGGCCCTGCGGCTGATTCGCCAGCGAGTGCCCCACGCCCTGCTGCAACTCAACGAAATCGCCGAACCGGTTGGCGCCG AAAGCGTGCTCAGCGAATGGATGGCCCACAGCTCCACCGGCGAACGTCGCTTGAGCTGTCGGGTGCCGGTGCACCTGATC AGCGAGGCTGACCGCCAGGAAGTCTCGGGCGACCCGCGCTACAAACTGCGCCGGGCGCGCAAGCGTATTGCCGCGTGCGG CGCCGAGGTCCGGCGGATCACGCCCGACGCGACCAGCATGGGCCCGTTGCTGCAGGCTATCAGCGAAGTCGAAGAGGTCA GTTGGAAAGGCGACGAAGGCGTCGGAATCTTTGCCAGCGACCTCAGCCGCCGCTGCATGGAAAACGCCTTCACCGCCCTC GCCGCTTCGGGCCGGGTGCGCGTGGTGATGCTGGAACTGGACGGACGTTGCATCAGCTATCGGCTCGGCCTGTTCGAACA GGGCCGGCTCTACGATTACAACCTCGCCTTCCTGCCGCAATACGCCGATCTGGGCAGCGGCCGGGTGCTGCTGGAGGAAT GGATTCGCTGGGGACTGGACGACAACTGGCGCTGGATCGATGCCTCGCGGGTCAGCCTGGAAAACTCCAGCCATCAACTG CACGAACGCATGACCGGGCAACTGGAACACTGGCGCTGGAGCTTCTACTCCTGGCGCCCGAGCGGCCTGTTGCTGGGGTT CGGGCTGCGCGTCTGGCACCGGCTCAAGCCTGGGTTGCAACAATGGCGGGCGAAGCGTGCGGCGGCCAGAGCGGCGGTCA TTGCGACACCTGTGATCAACCCCACCAAGGAGGGCGAACATGCCTCGCCAAGTCATAGTCAACGCTGA
Upstream 100 bases:
>100_bases CGCTGGCGCTTCTATCGCGAAACCCGCTACAGCGGCTCGCGCCTGGACGCGTTGCGCAAACCTTCCCGTCCACCTGTCAC AGCAACGGCGACCTGAGCCT
Downstream 100 bases:
>100_bases CGATTTCGGCCTCAGTCCGAACGAAAACGCGGTGATCCTCGGCGCGTTCCAGGCCGGGGTCATCAGCTCCGCCACCGCCA TGGCCAACATGCCGGCGTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 395; Mature: 394
Protein sequence:
>395_residues MAQFEWRTSLCAPDFPAAAYEALRLRVTDHTPFNSLDWLGAAEQTLDTHDRLHILLGWEADELRLCLPLVTSRERFFGLP FRVVHHLGYPLADRLALLSRLGADDMRQALRLIRQRVPHALLQLNEIAEPVGAESVLSEWMAHSSTGERRLSCRVPVHLI SEADRQEVSGDPRYKLRRARKRIAACGAEVRRITPDATSMGPLLQAISEVEEVSWKGDEGVGIFASDLSRRCMENAFTAL AASGRVRVVMLELDGRCISYRLGLFEQGRLYDYNLAFLPQYADLGSGRVLLEEWIRWGLDDNWRWIDASRVSLENSSHQL HERMTGQLEHWRWSFYSWRPSGLLLGFGLRVWHRLKPGLQQWRAKRAAARAAVIATPVINPTKEGEHASPSHSQR
Sequences:
>Translated_395_residues MAQFEWRTSLCAPDFPAAAYEALRLRVTDHTPFNSLDWLGAAEQTLDTHDRLHILLGWEADELRLCLPLVTSRERFFGLP FRVVHHLGYPLADRLALLSRLGADDMRQALRLIRQRVPHALLQLNEIAEPVGAESVLSEWMAHSSTGERRLSCRVPVHLI SEADRQEVSGDPRYKLRRARKRIAACGAEVRRITPDATSMGPLLQAISEVEEVSWKGDEGVGIFASDLSRRCMENAFTAL AASGRVRVVMLELDGRCISYRLGLFEQGRLYDYNLAFLPQYADLGSGRVLLEEWIRWGLDDNWRWIDASRVSLENSSHQL HERMTGQLEHWRWSFYSWRPSGLLLGFGLRVWHRLKPGLQQWRAKRAAARAAVIATPVINPTKEGEHASPSHSQR >Mature_394_residues AQFEWRTSLCAPDFPAAAYEALRLRVTDHTPFNSLDWLGAAEQTLDTHDRLHILLGWEADELRLCLPLVTSRERFFGLPF RVVHHLGYPLADRLALLSRLGADDMRQALRLIRQRVPHALLQLNEIAEPVGAESVLSEWMAHSSTGERRLSCRVPVHLIS EADRQEVSGDPRYKLRRARKRIAACGAEVRRITPDATSMGPLLQAISEVEEVSWKGDEGVGIFASDLSRRCMENAFTALA ASGRVRVVMLELDGRCISYRLGLFEQGRLYDYNLAFLPQYADLGSGRVLLEEWIRWGLDDNWRWIDASRVSLENSSHQLH ERMTGQLEHWRWSFYSWRPSGLLLGFGLRVWHRLKPGLQQWRAKRAAARAAVIATPVINPTKEGEHASPSHSQR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45025; Mature: 44894
Theoretical pI: Translated: 8.39; Mature: 8.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQFEWRTSLCAPDFPAAAYEALRLRVTDHTPFNSLDWLGAAEQTLDTHDRLHILLGWEA CCCCCCCCCCCCCCCCHHHHHHHEEEEECCCCCCCCCCCCCHHHHHCCCCCEEEEEECCC DELRLCLPLVTSRERFFGLPFRVVHHLGYPLADRLALLSRLGADDMRQALRLIRQRVPHA CHHHHHHHHHHCCHHHCCCHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH LLQLNEIAEPVGAESVLSEWMAHSSTGERRLSCRVPVHLISEADRQEVSGDPRYKLRRAR HHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEECCHHHHCCCHHHHCCCCHHHHHHHHH KRIAACGAEVRRITPDATSMGPLLQAISEVEEVSWKGDEGVGIFASDLSRRCMENAFTAL HHHHHHCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHH AASGRVRVVMLELDGRCISYRLGLFEQGRLYDYNLAFLPQYADLGSGRVLLEEWIRWGLD HCCCCEEEEEEEECCCEEEEEECCCCCCCEEEECCEECCCHHCCCCCHHHHHHHHHCCCC DNWRWIDASRVSLENSSHQLHERMTGQLEHWRWSFYSWRPSGLLLGFGLRVWHRLKPGLQ CCCEEEECHHEECCCCHHHHHHHHHCCHHHHEEEEEEECCCCEEEHHHHHHHHHHHHHHH QWRAKRAAARAAVIATPVINPTKEGEHASPSHSQR HHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCC >Mature Secondary Structure AQFEWRTSLCAPDFPAAAYEALRLRVTDHTPFNSLDWLGAAEQTLDTHDRLHILLGWEA CCCCCCCCCCCCCCCHHHHHHHEEEEECCCCCCCCCCCCCHHHHHCCCCCEEEEEECCC DELRLCLPLVTSRERFFGLPFRVVHHLGYPLADRLALLSRLGADDMRQALRLIRQRVPHA CHHHHHHHHHHCCHHHCCCHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH LLQLNEIAEPVGAESVLSEWMAHSSTGERRLSCRVPVHLISEADRQEVSGDPRYKLRRAR HHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEECCHHHHCCCHHHHCCCCHHHHHHHHH KRIAACGAEVRRITPDATSMGPLLQAISEVEEVSWKGDEGVGIFASDLSRRCMENAFTAL HHHHHHCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHH AASGRVRVVMLELDGRCISYRLGLFEQGRLYDYNLAFLPQYADLGSGRVLLEEWIRWGLD HCCCCEEEEEEEECCCEEEEEECCCCCCCEEEECCEECCCHHCCCCCHHHHHHHHHCCCC DNWRWIDASRVSLENSSHQLHERMTGQLEHWRWSFYSWRPSGLLLGFGLRVWHRLKPGLQ CCCEEEECHHEECCCCHHHHHHHHHCCHHHHEEEEEEECCCCEEEHHHHHHHHHHHHHHH QWRAKRAAARAAVIATPVINPTKEGEHASPSHSQR HHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA