| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77458211
Identifier: 77458211
GI number: 77458211
Start: 2266040
End: 2266585
Strand: Direct
Name: 77458211
Synonym: Pfl01_1984
Alternate gene names: NA
Gene position: 2266040-2266585 (Clockwise)
Preceding gene: 77458210
Following gene: 77458212
Centisome position: 35.2
GC content: 65.02
Gene sequence:
>546_bases ATGCGCGCCTTGAACCTCGACTTCCAGCCTCGTCCGCGCTCAGGCCCGTTGGGCTGGAGCCTGCTCGGCGGCGGTGTGTT ACTCGCGCTGGTGTGCTTCGGCCTCCAGCAGCACCTCGGCGAGCAGGCCGAGCAACAACAAGGTCACTTGCAGCACACCC AGCGCCAGCTCACCGGCGACAGCGGCTCCAAGACAACGCTGAGCCCGGCGGAAACCCGCGAGCAGGCGCAGAACCTTGCT GAAATGCGCAAGGTCTCGCAGCAACTGCGCCGCCCCTGGGAACGCCTGTTCGCCATGCTCGAAGCCATGCCGCGCGACGA CATAGCCTTGCTGACCCTGACCCCGGATGCGCGCAAGGGCCAGGTGCGGATCAGCGCCGAAGCCCGCGATCTGCAAGCGA TGCTGGATTTCCACAAACGGCTGGAGGCCAGTGACGAGCTGTCCGACGTGTCGCTGCTGAGCCACGAAATCGTCGTCAAA TCGCCGGAGCAACCGGTGCAATTCAACCTGTCGGCGACCTGGGAGATAGGCGATGCGAATCCCTAG
Upstream 100 bases:
>100_bases GCGCAACCGGATGTGGCGGGGGTGCACCTGCGTACCCTCGAAGACAACTCGATGACCGTGCGTGACGCCTTGTACGTCAT GTCCCGGGCGGTGGCCTGAC
Downstream 100 bases:
>100_bases ACTGATCGTTCACGAATACCTGCAAGGCCTCGGCGTACCGGGCCTGGCCGGTCTCGCGCTGCTGCTGGTCACGCTGGCCT GGGCACTCGGCGGTTTGCTG
Product: fimbrial assembly
Products: NA
Alternate protein names: Fimbrial Assembly
Number of amino acids: Translated: 181; Mature: 181
Protein sequence:
>181_residues MRALNLDFQPRPRSGPLGWSLLGGGVLLALVCFGLQQHLGEQAEQQQGHLQHTQRQLTGDSGSKTTLSPAETREQAQNLA EMRKVSQQLRRPWERLFAMLEAMPRDDIALLTLTPDARKGQVRISAEARDLQAMLDFHKRLEASDELSDVSLLSHEIVVK SPEQPVQFNLSATWEIGDANP
Sequences:
>Translated_181_residues MRALNLDFQPRPRSGPLGWSLLGGGVLLALVCFGLQQHLGEQAEQQQGHLQHTQRQLTGDSGSKTTLSPAETREQAQNLA EMRKVSQQLRRPWERLFAMLEAMPRDDIALLTLTPDARKGQVRISAEARDLQAMLDFHKRLEASDELSDVSLLSHEIVVK SPEQPVQFNLSATWEIGDANP >Mature_181_residues MRALNLDFQPRPRSGPLGWSLLGGGVLLALVCFGLQQHLGEQAEQQQGHLQHTQRQLTGDSGSKTTLSPAETREQAQNLA EMRKVSQQLRRPWERLFAMLEAMPRDDIALLTLTPDARKGQVRISAEARDLQAMLDFHKRLEASDELSDVSLLSHEIVVK SPEQPVQFNLSATWEIGDANP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20212; Mature: 20212
Theoretical pI: Translated: 6.01; Mature: 6.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRALNLDFQPRPRSGPLGWSLLGGGVLLALVCFGLQQHLGEQAEQQQGHLQHTQRQLTGD CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SGSKTTLSPAETREQAQNLAEMRKVSQQLRRPWERLFAMLEAMPRDDIALLTLTPDARKG CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC QVRISAEARDLQAMLDFHKRLEASDELSDVSLLSHEIVVKSPEQPVQFNLSATWEIGDAN EEEEECHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHEEECCCCCEEECCEEEEECCCCC P C >Mature Secondary Structure MRALNLDFQPRPRSGPLGWSLLGGGVLLALVCFGLQQHLGEQAEQQQGHLQHTQRQLTGD CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SGSKTTLSPAETREQAQNLAEMRKVSQQLRRPWERLFAMLEAMPRDDIALLTLTPDARKG CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC QVRISAEARDLQAMLDFHKRLEASDELSDVSLLSHEIVVKSPEQPVQFNLSATWEIGDAN EEEEECHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHEEECCCCCEEECCEEEEECCCCC P C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA