| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is 77458210
Identifier: 77458210
GI number: 77458210
Start: 2265268
End: 2266038
Strand: Direct
Name: 77458210
Synonym: Pfl01_1983
Alternate gene names: NA
Gene position: 2265268-2266038 (Clockwise)
Preceding gene: 77458209
Following gene: 77458211
Centisome position: 35.18
GC content: 67.57
Gene sequence:
>771_bases GTGCTCGGCGCCAGCGGTGTCGGCCTCGGCCAGCGCCGGGGCAGCGACACCCTGTGGCTGGGCAGCGTCGGCTACATCGA CGAAGGCTTTCAGAGCTACGCGGTGGCGTTGGACACCCTCGACCGTCTGCTCGGCGAACACACCCGTGCCGGTGCCGAGC TGAGCGTGGTGATCTCCGGCCACTTCAGCCGTTTCTGCCTGGTGCCGTGGAGCGAGCAGATCAGCAGCCCTGAGGAACTG CGCGGCTTCGCCCAACTGTGCTTCGAAGACCTGTTCGGCGCCCCGACCCAACCGTGGAGTCTGGTGTTGTCGGCCGAGCC GGCCGGGCATGACCGGATCGCCAGTGCCTTGCCGCAGGACTTGCTGGAACGCCTGCGCACGCTGGTCACGGGTCGCGGCC TGCGCCTGCGTTCGGTGCAGCCGTACCTGATGACCGCGTTCAACCGCTTCGACAAAAGCCTCGACGCCGGCGACTTCCTG TTCATCGTCGCCGAACCGCAACGCAGCGTGTTGCTGCTGGCGCGCGAAGGGCGCTGGTCGTCGGTGCGTTCGGTGGGTGG CAGCGACAGCGACGCGGCACTCAGCGCACTGATCGGCCGCGAACGGCAACTGCAAGCCTCCACCAGTGAACGCGCCTTCA ACGTTTATCTGCACGCCCCGGCGCGCCTCGATGCGCAACCGGATGTGGCGGGGGTGCACCTGCGTACCCTCGAAGACAAC TCGATGACCGTGCGTGACGCCTTGTACGTCATGTCCCGGGCGGTGGCCTGA
Upstream 100 bases:
>100_bases CGCCTGTTGCGCGAATCGGCGCTGGAACTGGTGGAGCACGGTCGGACCACGCTGGAGGAGATCAATCGTGTCACTTTTAT CGCGTGATCAATTTATCGCC
Downstream 100 bases:
>100_bases CATGCGCGCCTTGAACCTCGACTTCCAGCCTCGTCCGCGCTCAGGCCCGTTGGGCTGGAGCCTGCTCGGCGGCGGTGTGT TACTCGCGCTGGTGTGCTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 256; Mature: 256
Protein sequence:
>256_residues MLGASGVGLGQRRGSDTLWLGSVGYIDEGFQSYAVALDTLDRLLGEHTRAGAELSVVISGHFSRFCLVPWSEQISSPEEL RGFAQLCFEDLFGAPTQPWSLVLSAEPAGHDRIASALPQDLLERLRTLVTGRGLRLRSVQPYLMTAFNRFDKSLDAGDFL FIVAEPQRSVLLLAREGRWSSVRSVGGSDSDAALSALIGRERQLQASTSERAFNVYLHAPARLDAQPDVAGVHLRTLEDN SMTVRDALYVMSRAVA
Sequences:
>Translated_256_residues MLGASGVGLGQRRGSDTLWLGSVGYIDEGFQSYAVALDTLDRLLGEHTRAGAELSVVISGHFSRFCLVPWSEQISSPEEL RGFAQLCFEDLFGAPTQPWSLVLSAEPAGHDRIASALPQDLLERLRTLVTGRGLRLRSVQPYLMTAFNRFDKSLDAGDFL FIVAEPQRSVLLLAREGRWSSVRSVGGSDSDAALSALIGRERQLQASTSERAFNVYLHAPARLDAQPDVAGVHLRTLEDN SMTVRDALYVMSRAVA >Mature_256_residues MLGASGVGLGQRRGSDTLWLGSVGYIDEGFQSYAVALDTLDRLLGEHTRAGAELSVVISGHFSRFCLVPWSEQISSPEEL RGFAQLCFEDLFGAPTQPWSLVLSAEPAGHDRIASALPQDLLERLRTLVTGRGLRLRSVQPYLMTAFNRFDKSLDAGDFL FIVAEPQRSVLLLAREGRWSSVRSVGGSDSDAALSALIGRERQLQASTSERAFNVYLHAPARLDAQPDVAGVHLRTLEDN SMTVRDALYVMSRAVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27949; Mature: 27949
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGASGVGLGQRRGSDTLWLGSVGYIDEGFQSYAVALDTLDRLLGEHTRAGAELSVVISG CCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEC HFSRFCLVPWSEQISSPEELRGFAQLCFEDLFGAPTQPWSLVLSAEPAGHDRIASALPQD CCCEEEECCCHHHHCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHH LLERLRTLVTGRGLRLRSVQPYLMTAFNRFDKSLDAGDFLFIVAEPQRSVLLLAREGRWS HHHHHHHHHHCCCCEEECCCHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEEEECCCCH SVRSVGGSDSDAALSALIGRERQLQASTSERAFNVYLHAPARLDAQPDVAGVHLRTLEDN HHHHCCCCCHHHHHHHHHCCCHHHHCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEECCC SMTVRDALYVMSRAVA CCHHHHHHHHHHHHCC >Mature Secondary Structure MLGASGVGLGQRRGSDTLWLGSVGYIDEGFQSYAVALDTLDRLLGEHTRAGAELSVVISG CCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEC HFSRFCLVPWSEQISSPEELRGFAQLCFEDLFGAPTQPWSLVLSAEPAGHDRIASALPQD CCCEEEECCCHHHHCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHH LLERLRTLVTGRGLRLRSVQPYLMTAFNRFDKSLDAGDFLFIVAEPQRSVLLLAREGRWS HHHHHHHHHHCCCCEEECCCHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEEEECCCCH SVRSVGGSDSDAALSALIGRERQLQASTSERAFNVYLHAPARLDAQPDVAGVHLRTLEDN HHHHCCCCCHHHHHHHHHCCCHHHHCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEECCC SMTVRDALYVMSRAVA CCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA