| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is pheT [H]
Identifier: 77458163
GI number: 77458163
Start: 2204729
End: 2207107
Strand: Direct
Name: pheT [H]
Synonym: Pfl01_1936
Alternate gene names: 77458163
Gene position: 2204729-2207107 (Clockwise)
Preceding gene: 77458162
Following gene: 77458164
Centisome position: 34.24
GC content: 60.82
Gene sequence:
>2379_bases ATGAAATTCAGTGAACAATGGCTGCGTGGCTGGGTCAGCCCGCAGGTAGATCGCGACGCGCTGGTTGCCCGTCTGTCGAT GGCCGGTCTTGAGGTTGATAGCGTTACGCCGGCCGCCGGTGTTTTCAGTGGCGTGGTTGTGGGCGAGGTGCTGAGCACCG AGCAGCACCCCGATGCCGACAAATTGCGCGTTTGCCAGGTCAGCAATGGCGCGGAAACTTTCCAGGTTGTGTGTGGTGCG CCAAACGTGCGTCCGGGCCTGAAAATTCCGTTCGCGATGATCGGTGCCGAGCTGCCGGGCGACTTCAAGATCAAGAAGGC CAAGCTGCGCGGCGTCGAGTCCAACGGCATGCTGTGCTCGCAAGCCGAACTTCAGATCGGCGAAGGCAATGACGGTCTGA TGGAGCTGCCGGCTGATGCGTCGGTGGGCGAAGATTTTCGTGTTTATCTGGACCTGGAAGACGCCAGCATCGAAGTCGAT CTGACTCCGAACCGTGGCGACTGCCTGTCCCTGGCCGGTCTGGCCCGTGAAGTCGGCGCGCTGTACGACGCACCGGTCAC TCGCCCGGTGGTGATGGCTGTTCCTGCAGCGCACGACGAAGTGCGCTCCGTCGAAGTTCTGGCACCTGCTGCCTGCCCGC GTTATCTGGGTCGGGTCATCCGTAACGTTGACCTGTCCAGACCGACTCCGCTGTGGATGGTTGAGCGCCTGCGTCGCGCC GAAGTCCGCAGCATCGACGCCGCCGTCGACATCACCAACTACGTGATGCTCGAGCTGGGTCAGCCGCTGCACGCTTTCGA TCTCGCCGAAATCAACGGCGGCATCCGTGTTCGCATGGCGGAAGAGGGCGAGAAGCTCGTGCTGCTCGACGGTCAGGAAG TCAGCCTGCGTAGCGATACGCTGGTGGTCGCCGACCACACTCGCGCTCTGGCCATTGCCGGCGTGATGGGTGGCGAGCAC AGCGGTGTTTCTGCGACCACTCGCGACGTATTTCTTGAAAGTGCGTTCTTCGACCAGATCGCGGTGGCGGGCAAGGCTCG TTCCTACGGCCTGCACACCGACGCTTCGCACCGCTACGAACGCGGTGTGGACTGGCAACTGGCCCGTGAAGCCATGGAGC GCGCCACTGGCCTGCTGCTGGAAATCACCGGTGGCGAAGCCGGCCCGATCATCGAAACCGTCAGCGAGCAGCACTTGCCG TCGATCGCGCCGATCACCCTGCGTGCGCAGCGCATCACTCAGATGCTGGGCATGGAAATGGATTCGGCCGAAGTCGAGCG CCTGCTCAATGCTTTGGGTTTGAAGGTTTCCGCCGACGGAGCAGGGCAGTGGCGCGTAGAAGTGCCGAGCCATCGCTTCG ATATCAGTCTGGAAGTCGATCTGATCGAAGAGCTGGCGCGTCTGTACGGTTACAACCGCCTGCCGGTTCGTTACCCGCAA GCTCGTCTGGCGCCACAGGCCAAGGCTGAAGCGCGCAGCGATCTGCCGGAGCTGCGTCGTCTGCTGGTCGCTCGTGGTTA CCAGGAAGCGATCACTTACAGCTTCATCGATCCGAAGCAGTTCGAGCTGTTCAACCCGGGCGTCGAGCCGCTGCTGTTGG CGAACCCGATCTCCAATGACATGGCCGCCATGCGTTCGTCGCTGTGGCCGGGTCTGGTCAAGGCGCTGCAGCACAACCTC AACCGTCAGCAGGATCGTGTTCGTCTGTTCGAGAGCGGTCTGCGCTTCGTCGGTCAGCTGGAAGGTCTGAAGCAAGAACC GATGATCGCCGGTGTGGTGTGCGGCAGCCGTCTGCCGGAAGGCTGGGCGCAAGGCCGCGATACCGTCGACTTCTTCGACG TCAAGGCTGACGTAGAAGCGGTGCTGGGCTTTGCCGGTGCGCTGGATCAGTTTACTTTTGCACCGGGCAAGCACCCTGCA CTGCATCCAGGCCAGACCGCACGCATCGAGCGGGAAGGGCGTGAAGTCGGCTTTATCGGCGCGATTCACCCTGAGCTGTC GAAATCCCTGGGTCTCGACCGTCCGGTCTTCGTCTTCGAGCTGGTTCTGGCTGAAGTCGCTCTGGGGAAGATGCCGAAAT TCCACGAGTTGTCGCGCTTTCCTGAAGTGCGTCGTGACCTGGCACTGATTGCGCACAAAGACGTTGCAGCCTCGGCTGTA CTGGACGTAATCCGTGAAAATGCAGGCGAATGGCTGACAGACCTCAGGCTATTTGACGTGTATCAGGGTAAAGGCATTGA TACTGATAGAAAAAGCCTCGCAGTCGGCTTGACCTGGCAGCATCCATCGCGCACTCTTAATGACGATGAGGTGAATTCGA CGACGCAAAATATCCTCACCTCGCTCGAACAAAGGTTGAACGCCACGTTAAGGAAGTGA
Upstream 100 bases:
>100_bases TGCTGCGTTACGGCGTGAACGACTTGCGTCTGTTCTTCGACAACGACTTGCGGTTCCTCGCGCAATTTCGCTAGTCGTAA CGAATTCTTAGGAGAGCAGG
Downstream 100 bases:
>100_bases CGTATGGGGGCTTTGACGAAAGCTGAGATGGCGGAACGTCTGTATGAAGAGCTGGGCCTGAACAAGCGGGAAGCCAAGGA GTTGGTGGAACTGTTTTTCG
Product: phenylalanyl-tRNA synthetase subunit beta
Products: NA
Alternate protein names: Phenylalanine--tRNA ligase beta chain; PheRS [H]
Number of amino acids: Translated: 792; Mature: 792
Protein sequence:
>792_residues MKFSEQWLRGWVSPQVDRDALVARLSMAGLEVDSVTPAAGVFSGVVVGEVLSTEQHPDADKLRVCQVSNGAETFQVVCGA PNVRPGLKIPFAMIGAELPGDFKIKKAKLRGVESNGMLCSQAELQIGEGNDGLMELPADASVGEDFRVYLDLEDASIEVD LTPNRGDCLSLAGLAREVGALYDAPVTRPVVMAVPAAHDEVRSVEVLAPAACPRYLGRVIRNVDLSRPTPLWMVERLRRA EVRSIDAAVDITNYVMLELGQPLHAFDLAEINGGIRVRMAEEGEKLVLLDGQEVSLRSDTLVVADHTRALAIAGVMGGEH SGVSATTRDVFLESAFFDQIAVAGKARSYGLHTDASHRYERGVDWQLAREAMERATGLLLEITGGEAGPIIETVSEQHLP SIAPITLRAQRITQMLGMEMDSAEVERLLNALGLKVSADGAGQWRVEVPSHRFDISLEVDLIEELARLYGYNRLPVRYPQ ARLAPQAKAEARSDLPELRRLLVARGYQEAITYSFIDPKQFELFNPGVEPLLLANPISNDMAAMRSSLWPGLVKALQHNL NRQQDRVRLFESGLRFVGQLEGLKQEPMIAGVVCGSRLPEGWAQGRDTVDFFDVKADVEAVLGFAGALDQFTFAPGKHPA LHPGQTARIEREGREVGFIGAIHPELSKSLGLDRPVFVFELVLAEVALGKMPKFHELSRFPEVRRDLALIAHKDVAASAV LDVIRENAGEWLTDLRLFDVYQGKGIDTDRKSLAVGLTWQHPSRTLNDDEVNSTTQNILTSLEQRLNATLRK
Sequences:
>Translated_792_residues MKFSEQWLRGWVSPQVDRDALVARLSMAGLEVDSVTPAAGVFSGVVVGEVLSTEQHPDADKLRVCQVSNGAETFQVVCGA PNVRPGLKIPFAMIGAELPGDFKIKKAKLRGVESNGMLCSQAELQIGEGNDGLMELPADASVGEDFRVYLDLEDASIEVD LTPNRGDCLSLAGLAREVGALYDAPVTRPVVMAVPAAHDEVRSVEVLAPAACPRYLGRVIRNVDLSRPTPLWMVERLRRA EVRSIDAAVDITNYVMLELGQPLHAFDLAEINGGIRVRMAEEGEKLVLLDGQEVSLRSDTLVVADHTRALAIAGVMGGEH SGVSATTRDVFLESAFFDQIAVAGKARSYGLHTDASHRYERGVDWQLAREAMERATGLLLEITGGEAGPIIETVSEQHLP SIAPITLRAQRITQMLGMEMDSAEVERLLNALGLKVSADGAGQWRVEVPSHRFDISLEVDLIEELARLYGYNRLPVRYPQ ARLAPQAKAEARSDLPELRRLLVARGYQEAITYSFIDPKQFELFNPGVEPLLLANPISNDMAAMRSSLWPGLVKALQHNL NRQQDRVRLFESGLRFVGQLEGLKQEPMIAGVVCGSRLPEGWAQGRDTVDFFDVKADVEAVLGFAGALDQFTFAPGKHPA LHPGQTARIEREGREVGFIGAIHPELSKSLGLDRPVFVFELVLAEVALGKMPKFHELSRFPEVRRDLALIAHKDVAASAV LDVIRENAGEWLTDLRLFDVYQGKGIDTDRKSLAVGLTWQHPSRTLNDDEVNSTTQNILTSLEQRLNATLRK >Mature_792_residues MKFSEQWLRGWVSPQVDRDALVARLSMAGLEVDSVTPAAGVFSGVVVGEVLSTEQHPDADKLRVCQVSNGAETFQVVCGA PNVRPGLKIPFAMIGAELPGDFKIKKAKLRGVESNGMLCSQAELQIGEGNDGLMELPADASVGEDFRVYLDLEDASIEVD LTPNRGDCLSLAGLAREVGALYDAPVTRPVVMAVPAAHDEVRSVEVLAPAACPRYLGRVIRNVDLSRPTPLWMVERLRRA EVRSIDAAVDITNYVMLELGQPLHAFDLAEINGGIRVRMAEEGEKLVLLDGQEVSLRSDTLVVADHTRALAIAGVMGGEH SGVSATTRDVFLESAFFDQIAVAGKARSYGLHTDASHRYERGVDWQLAREAMERATGLLLEITGGEAGPIIETVSEQHLP SIAPITLRAQRITQMLGMEMDSAEVERLLNALGLKVSADGAGQWRVEVPSHRFDISLEVDLIEELARLYGYNRLPVRYPQ ARLAPQAKAEARSDLPELRRLLVARGYQEAITYSFIDPKQFELFNPGVEPLLLANPISNDMAAMRSSLWPGLVKALQHNL NRQQDRVRLFESGLRFVGQLEGLKQEPMIAGVVCGSRLPEGWAQGRDTVDFFDVKADVEAVLGFAGALDQFTFAPGKHPA LHPGQTARIEREGREVGFIGAIHPELSKSLGLDRPVFVFELVLAEVALGKMPKFHELSRFPEVRRDLALIAHKDVAASAV LDVIRENAGEWLTDLRLFDVYQGKGIDTDRKSLAVGLTWQHPSRTLNDDEVNSTTQNILTSLEQRLNATLRK
Specific function: Unknown
COG id: COG0072
COG function: function code J; Phenylalanyl-tRNA synthetase beta subunit
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 tRNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1788006, Length=795, Percent_Identity=51.4465408805031, Blast_Score=810, Evalue=0.0, Organism=Caenorhabditis elegans, GI17533403, Length=576, Percent_Identity=22.0486111111111, Blast_Score=80, Evalue=3e-15,
Paralogues:
None
Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005146 - InterPro: IPR005147 - InterPro: IPR009061 - InterPro: IPR012340 - InterPro: IPR016027 - InterPro: IPR004532 - InterPro: IPR020825 - InterPro: IPR005121 - InterPro: IPR002547 [H]
Pfam domain/function: PF03483 B3_4; PF03484 B5; PF03147 FDX-ACB; PF01588 tRNA_bind [H]
EC number: =6.1.1.20 [H]
Molecular weight: Translated: 86825; Mature: 86825
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: PS50886 TRBD ; PS00758 ARGE_DAPE_CPG2_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFSEQWLRGWVSPQVDRDALVARLSMAGLEVDSVTPAAGVFSGVVVGEVLSTEQHPDAD CCCHHHHHHHCCCCCCCHHHHHHHHHHHCCEECCCCCHHHHHHHHHHHHHHCCCCCCCCC KLRVCQVSNGAETFQVVCGAPNVRPGLKIPFAMIGAELPGDFKIKKAKLRGVESNGMLCS CEEEEEECCCCCEEEEEECCCCCCCCCCCCHHHHCCCCCCCCEEEHHHHCCCCCCCEEEE QAELQIGEGNDGLMELPADASVGEDFRVYLDLEDASIEVDLTPNRGDCLSLAGLAREVGA CCCEEECCCCCCCEECCCCCCCCCCEEEEEEEECCEEEEEECCCCCCHHHHHHHHHHHHH LYDAPVTRPVVMAVPAAHDEVRSVEVLAPAACPRYLGRVIRNVDLSRPTPLWMVERLRRA HHCCCCCCCEEEEECCCCHHHHEEEEECCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH EVRSIDAAVDITNYVMLELGQPLHAFDLAEINGGIRVRMAEEGEKLVLLDGQEVSLRSDT HHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCEEEEECCCCCEEEEECCCCEEECCCE LVVADHTRALAIAGVMGGEHSGVSATTRDVFLESAFFDQIAVAGKARSYGLHTDASHRYE EEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH RGVDWQLAREAMERATGLLLEITGGEAGPIIETVSEQHLPSIAPITLRAQRITQMLGMEM CCCCHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCC DSAEVERLLNALGLKVSADGAGQWRVEVPSHRFDISLEVDLIEELARLYGYNRLPVRYPQ CHHHHHHHHHHHCCEEECCCCCEEEEECCCCEEEEEEEHHHHHHHHHHHCCCCCCCCCCH ARLAPQAKAEARSDLPELRRLLVARGYQEAITYSFIDPKQFELFNPGVEPLLLANPISND HHCCCCHHHHHHCCHHHHHHHHHHCCHHHHHEEEECCCCHHEEECCCCCCEEEECCCCHH MAAMRSSLWPGLVKALQHNLNRQQDRVRLFESGLRFVGQLEGLKQEPMIAGVVCGSRLPE HHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCC GWAQGRDTVDFFDVKADVEAVLGFAGALDQFTFAPGKHPALHPGQTARIEREGREVGFIG HHHCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCEEEEEE AIHPELSKSLGLDRPVFVFELVLAEVALGKMPKFHELSRFPEVRRDLALIAHKDVAASAV ECCHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHH LDVIRENAGEWLTDLRLFDVYQGKGIDTDRKSLAVGLTWQHPSRTLNDDEVNSTTQNILT HHHHHHHHHHHHHHHHHEEHCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHH SLEQRLNATLRK HHHHHHHHHHCC >Mature Secondary Structure MKFSEQWLRGWVSPQVDRDALVARLSMAGLEVDSVTPAAGVFSGVVVGEVLSTEQHPDAD CCCHHHHHHHCCCCCCCHHHHHHHHHHHCCEECCCCCHHHHHHHHHHHHHHCCCCCCCCC KLRVCQVSNGAETFQVVCGAPNVRPGLKIPFAMIGAELPGDFKIKKAKLRGVESNGMLCS CEEEEEECCCCCEEEEEECCCCCCCCCCCCHHHHCCCCCCCCEEEHHHHCCCCCCCEEEE QAELQIGEGNDGLMELPADASVGEDFRVYLDLEDASIEVDLTPNRGDCLSLAGLAREVGA CCCEEECCCCCCCEECCCCCCCCCCEEEEEEEECCEEEEEECCCCCCHHHHHHHHHHHHH LYDAPVTRPVVMAVPAAHDEVRSVEVLAPAACPRYLGRVIRNVDLSRPTPLWMVERLRRA HHCCCCCCCEEEEECCCCHHHHEEEEECCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH EVRSIDAAVDITNYVMLELGQPLHAFDLAEINGGIRVRMAEEGEKLVLLDGQEVSLRSDT HHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCEEEEECCCCCEEEEECCCCEEECCCE LVVADHTRALAIAGVMGGEHSGVSATTRDVFLESAFFDQIAVAGKARSYGLHTDASHRYE EEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH RGVDWQLAREAMERATGLLLEITGGEAGPIIETVSEQHLPSIAPITLRAQRITQMLGMEM CCCCHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCC DSAEVERLLNALGLKVSADGAGQWRVEVPSHRFDISLEVDLIEELARLYGYNRLPVRYPQ CHHHHHHHHHHHCCEEECCCCCEEEEECCCCEEEEEEEHHHHHHHHHHHCCCCCCCCCCH ARLAPQAKAEARSDLPELRRLLVARGYQEAITYSFIDPKQFELFNPGVEPLLLANPISND HHCCCCHHHHHHCCHHHHHHHHHHCCHHHHHEEEECCCCHHEEECCCCCCEEEECCCCHH MAAMRSSLWPGLVKALQHNLNRQQDRVRLFESGLRFVGQLEGLKQEPMIAGVVCGSRLPE HHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCC GWAQGRDTVDFFDVKADVEAVLGFAGALDQFTFAPGKHPALHPGQTARIEREGREVGFIG HHHCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCEEEEEE AIHPELSKSLGLDRPVFVFELVLAEVALGKMPKFHELSRFPEVRRDLALIAHKDVAASAV ECCHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHH LDVIRENAGEWLTDLRLFDVYQGKGIDTDRKSLAVGLTWQHPSRTLNDDEVNSTTQNILT HHHHHHHHHHHHHHHHHEEHCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHH SLEQRLNATLRK HHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA