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The map label for this gene is csrA3 [H]

Identifier: 77458139

GI number: 77458139

Start: 2185977

End: 2186171

Strand: Reverse

Name: csrA3 [H]

Synonym: Pfl01_1912

Alternate gene names: 77458139

Gene position: 2186171-2185977 (Counterclockwise)

Preceding gene: 77458142

Following gene: 77458136

Centisome position: 33.96

GC content: 55.38

Gene sequence:

>195_bases
ATGCTGATACTCACCCGCAAAGTCGGTGAAAGCATAAACATTGGTGATGACATCACGATCACCATTCTCGGCGTCAGCGG
CCAGCAAGTTCGAATCGGCATCAATGCTCCGAAGAACGTTGCAGTACACCGGGAAGAGATCTACCAGCGCATCCAGGCGG
GCCTGACCGCTCCGGACAAGCCACAAACGCCCTGA

Upstream 100 bases:

>100_bases
AGAGGCACCCAAACTGTAAGACTTCGCACTAATCTATACGTACCACCGACCTCTGCACTGTCTGAATCAGGTGCCCTACA
AAGCAATCAAGGAGAAGACC

Downstream 100 bases:

>100_bases
GCCCTATCGCAGTCAGTAGCCAGTTCGTTTGCCTGCGCGCCAATGACTGGCTAAAGATTCAAGCGCCGTATTGCCATTCC
CCCACCTCCCTGGTGACGGC

Product: carbon storage regulator CsrA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 64; Mature: 64

Protein sequence:

>64_residues
MLILTRKVGESINIGDDITITILGVSGQQVRIGINAPKNVAVHREEIYQRIQAGLTAPDKPQTP

Sequences:

>Translated_64_residues
MLILTRKVGESINIGDDITITILGVSGQQVRIGINAPKNVAVHREEIYQRIQAGLTAPDKPQTP
>Mature_64_residues
MLILTRKVGESINIGDDITITILGVSGQQVRIGINAPKNVAVHREEIYQRIQAGLTAPDKPQTP

Specific function: Could accelerate the degradation of some genes transcripts potentially through selective RNA binding [H]

COG id: COG1551

COG function: function code T; Carbon storage regulator (could also regulate swarming and quorum sensing)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CsrA family [H]

Homologues:

Organism=Escherichia coli, GI1789047, Length=53, Percent_Identity=75.4716981132076, Blast_Score=90, Evalue=3e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003751
- ProDom:   PD009007 [H]

Pfam domain/function: PF02599 CsrA [H]

EC number: NA

Molecular weight: Translated: 6949; Mature: 6949

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLILTRKVGESINIGDDITITILGVSGQQVRIGINAPKNVAVHREEIYQRIQAGLTAPDK
CEEEECCCCCCCCCCCCEEEEEEECCCCEEEEECCCCCCEEECHHHHHHHHHHCCCCCCC
PQTP
CCCC
>Mature Secondary Structure
MLILTRKVGESINIGDDITITILGVSGQQVRIGINAPKNVAVHREEIYQRIQAGLTAPDK
CEEEECCCCCCCCCCCCEEEEEEECCCCEEEEECCCCCCEEECHHHHHHHHHHCCCCCCC
PQTP
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12928499 [H]