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The map label for this gene is yeiE [C]

Identifier: 77458115

GI number: 77458115

Start: 2157091

End: 2158011

Strand: Reverse

Name: yeiE [C]

Synonym: Pfl01_1888

Alternate gene names: 77458115

Gene position: 2158011-2157091 (Counterclockwise)

Preceding gene: 77458136

Following gene: 77458114

Centisome position: 33.52

GC content: 59.93

Gene sequence:

>921_bases
ATGCTTTGGATAACCAACTGGAATGCGAACATGGACCTGGCCAACCTCAATGCTTTTATCGCGATTGCCGAGACTGGAAG
CTTCTCCGGCGCCGGCGAACGGCTGCACCTGACGCAACCGGCGATCAGCAAACGCATCGCTGGCCTGGAGCAGCAACTGA
ATGTGCGGCTGTTCGACCGGTTGGGCCGTGAAGTGGGTCTGACCGAGGCCGGCCGGGCCTTACTGCCACGGGCTTATCAG
ATTCTCAACGTACTGGACGACACGCGCCGTGCTCTGACCAACCTGACCGGCGAAGTCACGGGTCGCCTGACTTTGGCCAC
CAGTCACCACATCGGCCTGCACCGCTTGCCACCGCTGTTGAGGGAATACACTCGCCGCTACCCGCAGGTTGCGCTGGATA
TTCAGTTCCTCGATTCGGAAGTGGCCTACGAGGAAATTCTCCATGGCCGGGCAGAACTGGCAGTCATCACCCTGGCGCCG
GAGCCGCACACGCTGGTCAAAGCCACGCCGGTCTGGGATGACCCGCTGGATTTCGTGGTCGCCCCGGAACATTCATTGAT
CAGCAATGGCGCCGTCACATTGGCGGACATTGCCGGCCATCCAGCGGTTTTCCCCGGCGGCAACACCTTTACCCACCATA
TTGTCCAACGGCTGTTCGAGGCTCAGGGCCTGACGCCGAACATCGCCATGAGCACCAACTACCTGGAAACCATCAAGATG
ATGGTGTCGATCGGCCTGGCCTGGAGTGTTTTGCCGCGCACGATGCTCGATGAGCAGGTGGCGCGCATACCTTTACCGGG
CATACAGCTCAGTCGCCAGCTAGGCTATATCCTGCACACTGAAAGGACGCTGTCGAATGCTGCACGGGCGTTTATGGCCC
TGCTGGACGCTCAAATCGATCTGCCAGGGACTCTCGGCTAA

Upstream 100 bases:

>100_bases
CTCATCAGCTTGTTTCTATGCCCTGGGCTTATCAATAACCCTTTGGCTTGTGAGGCCGATCCTATGGGGTTAGATTAAAT
AACTCAAATTCATATTTTTT

Downstream 100 bases:

>100_bases
CTTGTGCTACTCCTATAGAGCTGCCGCCCCTGTGCCAAACGCCCAAATCAGCTCAAGGCCCCTTAACAATGCCGAAATCT
GTTGACCGTATTCCGCCGAT

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MLWITNWNANMDLANLNAFIAIAETGSFSGAGERLHLTQPAISKRIAGLEQQLNVRLFDRLGREVGLTEAGRALLPRAYQ
ILNVLDDTRRALTNLTGEVTGRLTLATSHHIGLHRLPPLLREYTRRYPQVALDIQFLDSEVAYEEILHGRAELAVITLAP
EPHTLVKATPVWDDPLDFVVAPEHSLISNGAVTLADIAGHPAVFPGGNTFTHHIVQRLFEAQGLTPNIAMSTNYLETIKM
MVSIGLAWSVLPRTMLDEQVARIPLPGIQLSRQLGYILHTERTLSNAARAFMALLDAQIDLPGTLG

Sequences:

>Translated_306_residues
MLWITNWNANMDLANLNAFIAIAETGSFSGAGERLHLTQPAISKRIAGLEQQLNVRLFDRLGREVGLTEAGRALLPRAYQ
ILNVLDDTRRALTNLTGEVTGRLTLATSHHIGLHRLPPLLREYTRRYPQVALDIQFLDSEVAYEEILHGRAELAVITLAP
EPHTLVKATPVWDDPLDFVVAPEHSLISNGAVTLADIAGHPAVFPGGNTFTHHIVQRLFEAQGLTPNIAMSTNYLETIKM
MVSIGLAWSVLPRTMLDEQVARIPLPGIQLSRQLGYILHTERTLSNAARAFMALLDAQIDLPGTLG
>Mature_306_residues
MLWITNWNANMDLANLNAFIAIAETGSFSGAGERLHLTQPAISKRIAGLEQQLNVRLFDRLGREVGLTEAGRALLPRAYQ
ILNVLDDTRRALTNLTGEVTGRLTLATSHHIGLHRLPPLLREYTRRYPQVALDIQFLDSEVAYEEILHGRAELAVITLAP
EPHTLVKATPVWDDPLDFVVAPEHSLISNGAVTLADIAGHPAVFPGGNTFTHHIVQRLFEAQGLTPNIAMSTNYLETIKM
MVSIGLAWSVLPRTMLDEQVARIPLPGIQLSRQLGYILHTERTLSNAARAFMALLDAQIDLPGTLG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788481, Length=294, Percent_Identity=30.6122448979592, Blast_Score=112, Evalue=2e-26,
Organism=Escherichia coli, GI145693105, Length=288, Percent_Identity=26.0416666666667, Blast_Score=110, Evalue=2e-25,
Organism=Escherichia coli, GI157672245, Length=239, Percent_Identity=30.9623430962343, Blast_Score=107, Evalue=1e-24,
Organism=Escherichia coli, GI1788748, Length=303, Percent_Identity=28.0528052805281, Blast_Score=103, Evalue=2e-23,
Organism=Escherichia coli, GI1787879, Length=256, Percent_Identity=32.03125, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI1787530, Length=258, Percent_Identity=27.5193798449612, Blast_Score=92, Evalue=5e-20,
Organism=Escherichia coli, GI87082132, Length=254, Percent_Identity=26.7716535433071, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI1787806, Length=248, Percent_Identity=26.6129032258064, Blast_Score=87, Evalue=9e-19,
Organism=Escherichia coli, GI1790399, Length=243, Percent_Identity=23.4567901234568, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1786401, Length=299, Percent_Identity=24.4147157190635, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI2367136, Length=259, Percent_Identity=27.4131274131274, Blast_Score=82, Evalue=5e-17,
Organism=Escherichia coli, GI1790262, Length=241, Percent_Identity=26.5560165975104, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1788296, Length=217, Percent_Identity=29.0322580645161, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1788887, Length=251, Percent_Identity=27.8884462151394, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1787601, Length=250, Percent_Identity=23.2, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1788297, Length=245, Percent_Identity=24.4897959183673, Blast_Score=72, Evalue=5e-14,
Organism=Escherichia coli, GI87081904, Length=294, Percent_Identity=22.4489795918367, Blast_Score=71, Evalue=7e-14,
Organism=Escherichia coli, GI1787128, Length=205, Percent_Identity=28.2926829268293, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1790208, Length=155, Percent_Identity=31.6129032258064, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1787589, Length=125, Percent_Identity=32.8, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1788626, Length=177, Percent_Identity=31.638418079096, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1788706, Length=124, Percent_Identity=36.2903225806452, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1789506, Length=243, Percent_Identity=23.8683127572016, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1786713, Length=261, Percent_Identity=29.5019157088123, Blast_Score=65, Evalue=6e-12,
Organism=Escherichia coli, GI1786508, Length=178, Percent_Identity=28.0898876404494, Blast_Score=65, Evalue=8e-12,
Organism=Escherichia coli, GI1789639, Length=122, Percent_Identity=27.8688524590164, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1789204, Length=250, Percent_Identity=24.8, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1787949, Length=141, Percent_Identity=28.3687943262411, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1789173, Length=128, Percent_Identity=32.8125, Blast_Score=61, Evalue=9e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1 [H]

EC number: NA

Molecular weight: Translated: 33690; Mature: 33690

Theoretical pI: Translated: 6.44; Mature: 6.44

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLWITNWNANMDLANLNAFIAIAETGSFSGAGERLHLTQPAISKRIAGLEQQLNVRLFDR
CEEEEECCCCCCEECCEEEEEEEECCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHH
LGREVGLTEAGRALLPRAYQILNVLDDTRRALTNLTGEVTGRLTLATSHHIGLHRLPPLL
CCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHCCHHH
REYTRRYPQVALDIQFLDSEVAYEEILHGRAELAVITLAPEPHTLVKATPVWDDPLDFVV
HHHHHHCCCEEEEEEECCHHHHHHHHHCCCCEEEEEEECCCCCEEEEECCCCCCCCCEEE
APEHSLISNGAVTLADIAGHPAVFPGGNTFTHHIVQRLFEAQGLTPNIAMSTNYLETIKM
CCCHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEECHHHHHHHHH
MVSIGLAWSVLPRTMLDEQVARIPLPGIQLSRQLGYILHTERTLSNAARAFMALLDAQID
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
LPGTLG
CCCCCC
>Mature Secondary Structure
MLWITNWNANMDLANLNAFIAIAETGSFSGAGERLHLTQPAISKRIAGLEQQLNVRLFDR
CEEEEECCCCCCEECCEEEEEEEECCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHH
LGREVGLTEAGRALLPRAYQILNVLDDTRRALTNLTGEVTGRLTLATSHHIGLHRLPPLL
CCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHCCHHH
REYTRRYPQVALDIQFLDSEVAYEEILHGRAELAVITLAPEPHTLVKATPVWDDPLDFVV
HHHHHHCCCEEEEEEECCHHHHHHHHHCCCCEEEEEEECCCCCEEEEECCCCCCCCCEEE
APEHSLISNGAVTLADIAGHPAVFPGGNTFTHHIVQRLFEAQGLTPNIAMSTNYLETIKM
CCCHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEECHHHHHHHHH
MVSIGLAWSVLPRTMLDEQVARIPLPGIQLSRQLGYILHTERTLSNAARAFMALLDAQID
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
LPGTLG
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9108283 [H]