| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77458044
Identifier: 77458044
GI number: 77458044
Start: 2030139
End: 2030678
Strand: Reverse
Name: 77458044
Synonym: Pfl01_1817
Alternate gene names: NA
Gene position: 2030678-2030139 (Counterclockwise)
Preceding gene: 77458045
Following gene: 77458043
Centisome position: 31.54
GC content: 59.63
Gene sequence:
>540_bases ATGCCCGCAGCAAACGCCGCAAGTCCCTGGTACAAGCACCTTTGGCCATGGATCATCATCGGGATTCTGGCCTGTTCGGT GACCCTGACGCTGTCCATGGTGACCATCGCGGTGAACAACCCGGACAACCTGGTCAACGACAACTACTACGAGGCCGGCA AAGGCATCAACCGTTCGCTGGATCGCGAGCTGCTGGCGCAGACCCTGAAGATGCGCGCGGCCGTGCATCTGGATGACGTC ACTGGCGAGGTCGACCTGCGTCTGAGCGGCGACAGCCAGCCTAAGACCCTGGAACTGAACCTGATCTCGCCGACCCAGCC GGAGAAGGATCGCAAGATCGTCCTGGCCCGCAGCGAGACTGAAACCGGCCGCTACATCGGCCAGTTGAGCGACAAGATCG AAGGCCGGCGTTTTGTGGAGTTGCTGGGCACTCAGGATGATCACGTGTGGCGGATGTTCGAGGAAGAACTGGTCAGCCAT GAGAAGGATTTGTTGCTGGGTGATGAACCGCTGCAGGGCGCCGAGGATTTGAAGAAGTAA
Upstream 100 bases:
>100_bases ACGAGGTGAAATTCATCCTCAAGGATGCCGATGACGACAGCGTCCACGTAGAAGCCAAGAGCCGGTTCATCGGCCCACAA AATCGTTGAGAGAACTGAAC
Downstream 100 bases:
>100_bases GCAGCCTGCAAGTGCCCCCTCACCCTGGCCCTCTCCCCCTGGAGAGGGAACTGATCTCGGACGCTTGCACGCGCCATGTA TGCCAGTGACGATGTCGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 179; Mature: 178
Protein sequence:
>179_residues MPAANAASPWYKHLWPWIIIGILACSVTLTLSMVTIAVNNPDNLVNDNYYEAGKGINRSLDRELLAQTLKMRAAVHLDDV TGEVDLRLSGDSQPKTLELNLISPTQPEKDRKIVLARSETETGRYIGQLSDKIEGRRFVELLGTQDDHVWRMFEEELVSH EKDLLLGDEPLQGAEDLKK
Sequences:
>Translated_179_residues MPAANAASPWYKHLWPWIIIGILACSVTLTLSMVTIAVNNPDNLVNDNYYEAGKGINRSLDRELLAQTLKMRAAVHLDDV TGEVDLRLSGDSQPKTLELNLISPTQPEKDRKIVLARSETETGRYIGQLSDKIEGRRFVELLGTQDDHVWRMFEEELVSH EKDLLLGDEPLQGAEDLKK >Mature_178_residues PAANAASPWYKHLWPWIIIGILACSVTLTLSMVTIAVNNPDNLVNDNYYEAGKGINRSLDRELLAQTLKMRAAVHLDDVT GEVDLRLSGDSQPKTLELNLISPTQPEKDRKIVLARSETETGRYIGQLSDKIEGRRFVELLGTQDDHVWRMFEEELVSHE KDLLLGDEPLQGAEDLKK
Specific function: Unknown
COG id: COG3198
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20150; Mature: 20019
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAANAASPWYKHLWPWIIIGILACSVTLTLSMVTIAVNNPDNLVNDNYYEAGKGINRSL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCHHHHCCCCCHHH DRELLAQTLKMRAAVHLDDVTGEVDLRLSGDSQPKTLELNLISPTQPEKDRKIVLARSET HHHHHHHHHHHHHHHEECCCCCEEEEEECCCCCCCEEEEEEECCCCCCCCCEEEEEECCC ETGRYIGQLSDKIEGRRFVELLGTQDDHVWRMFEEELVSHEKDLLLGDEPLQGAEDLKK CHHHHHHHHHHHHCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHCC >Mature Secondary Structure PAANAASPWYKHLWPWIIIGILACSVTLTLSMVTIAVNNPDNLVNDNYYEAGKGINRSL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCHHHHCCCCCHHH DRELLAQTLKMRAAVHLDDVTGEVDLRLSGDSQPKTLELNLISPTQPEKDRKIVLARSET HHHHHHHHHHHHHHHEECCCCCEEEEEECCCCCCCEEEEEEECCCCCCCCCEEEEEECCC ETGRYIGQLSDKIEGRRFVELLGTQDDHVWRMFEEELVSHEKDLLLGDEPLQGAEDLKK CHHHHHHHHHHHHCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA