| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is rmf [C]
Identifier: 77458014
GI number: 77458014
Start: 1988776
End: 1988991
Strand: Reverse
Name: rmf [C]
Synonym: Pfl01_1787
Alternate gene names: 77458014
Gene position: 1988991-1988776 (Counterclockwise)
Preceding gene: 77458017
Following gene: 77458012
Centisome position: 30.89
GC content: 54.63
Gene sequence:
>216_bases ATGAGAAGACTTAAGCGTGATCCGTTGGAAAGAGCATTTTTGCGCGGATATCAATATGGCGTTGGTGGCAAATCCCGTGA GCTTTGCCCATTTACTCTACCGTCGGTACGTCAAGCCTGGATCAACGGCTGGCGAGAAGGACGCGGCGACAACTGGGACG GTATGACCGGCACTGCGGGAATCCACAGACTCAACGAACTTCACGCCGTCGGCTGA
Upstream 100 bases:
>100_bases TCGCCACGCCGGCAGCGAGCCGCCAACGGCAGAGTTTTTCTGCCAGACCTCAGTTGAGGTCGACGCGACAAAAACAGTCA ACAAGTGAGGGAAACACCCT
Downstream 100 bases:
>100_bases CACAGGGCACTTATTGCGACACGACAATCTGATTTCGTAACGACCTGATCACCATGCACGTCCTTCCCGGACGGCGGGCT ACGGCCCAGGGGCTCCTTCG
Product: ribosome modulation factor
Products: NA
Alternate protein names: Ribosome Modulation Factor-Related Protein
Number of amino acids: Translated: 71; Mature: 71
Protein sequence:
>71_residues MRRLKRDPLERAFLRGYQYGVGGKSRELCPFTLPSVRQAWINGWREGRGDNWDGMTGTAGIHRLNELHAVG
Sequences:
>Translated_71_residues MRRLKRDPLERAFLRGYQYGVGGKSRELCPFTLPSVRQAWINGWREGRGDNWDGMTGTAGIHRLNELHAVG >Mature_71_residues MRRLKRDPLERAFLRGYQYGVGGKSRELCPFTLPSVRQAWINGWREGRGDNWDGMTGTAGIHRLNELHAVG
Specific function: Associates With 70s Ribosomes And Converts Them To A Dimeric Form (100s Ribosomes) Which Appear During The Transition From The Exponential Growth Phase To The Stationary Phase Of Escherichia Coli Cells. [C]
COG id: COG3130
COG function: function code J; Ribosome modulation factor
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787186, Length=50, Percent_Identity=52, Blast_Score=61, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8112; Mature: 8112
Theoretical pI: Translated: 10.87; Mature: 10.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRLKRDPLERAFLRGYQYGVGGKSRELCPFTLPSVRQAWINGWREGRGDNWDGMTGTAG CCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHH IHRLNELHAVG HHHHHHHHCCC >Mature Secondary Structure MRRLKRDPLERAFLRGYQYGVGGKSRELCPFTLPSVRQAWINGWREGRGDNWDGMTGTAG CCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHH IHRLNELHAVG HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA