| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is nasA [H]
Identifier: 77458010
GI number: 77458010
Start: 1984161
End: 1985372
Strand: Reverse
Name: nasA [H]
Synonym: Pfl01_1783
Alternate gene names: 77458010
Gene position: 1985372-1984161 (Counterclockwise)
Preceding gene: 77458011
Following gene: 77458009
Centisome position: 30.84
GC content: 63.7
Gene sequence:
>1212_bases ATGAATAAAAGCTTCTGGAAATCCGGCCACACCCCGACCCTGTTCGCGGCCTTCCTGTATTTCGACCTGAGCTTCATGGT CTGGTACCTGCTCGGCCCGCTGGCGGTGCAGATTGCTGGCGATCTGCACCTGACTACCCAGCAGCGCGGTCTTGTGGTCG CCACGCCGATTCTGGCCGGCGCGGTACTGCGTTTTGCGATGGGCATGCTCGCCGATCGCCTGTCGCCGAAAACCGCCGGG CTGATCGGCCAGGTGATCGTGATCTGTGCGCTGTTCGGTGCCTGGAAACTGGGCATCCACAGTTATGAACAGGCCCTGCT GCTCGGTTTGTTCCTCGGTATGGCCGGCGCCTCGTTCGCCGTGGCCCTGCCCCTGGCCTCGCAGTGGTATCCGCCGGAGC ATCAGGGCAAGGCGATGGGCATCGCCGGTGCCGGCAACTCCGGCACCGTATTCGCGGCACTGATCGCCCCGGTGCTGGCG GCGGCGTTTGGCTGGAGCAATGTATTCGGTTTCGCCCTGATCCCGTTGATCCTGACCCTGGTGCTGTTCGCCTGGCTGGC GAAAAACGCGCCGGAGCGACCAAGAGCCAAAGCCATGGCCGACTACTTCAAGGCTTTGGGTGATCGCGACAGCTGGTGGT TCATGTTTTTCTACAGCGTCACCTTCGGCGGCTTCATCGGCCTGGCCAGCGCCCTGCCCGGCTACTTCAACGATCAATAC GGCCTGAGCCCGGTGACCGCCGGTTACTACACCGCCGCCTGCGTCTTCGGCGGCAGCCTGATGCGTCCCCTCGGTGGCGC ACTGGCTGACCGATTCGGTGGTATTCGCACGCTTTTGGCGATGTACACGGTCGCCGCAGTTTGTATCGCGGCGGTCGGTT TCAACCTGCCAAGTTCCTACGCGGCGCTGGCACTTTTCGTCTGCACCATGCTCGGTCTCGGCGCGGGTAACGGCGCGGTG TTCCAACTGGTGCCGCAACGTTTCCGTCGCGAAATCGGCGTGATGACCGGGCTGATCGGCATGGCCGGCGGTATCGGCGG TTTTGCCCTGGCGGCAGGCATGGGCGCGATCAAACAGAGCACCGGCAGCTATCAACTGGCGCTGTGGTTGTTCGCCAGCC TTGGCGTGTTGGCCTGGTTCGGTCTGCACGGGGTCAAACGTCGCTGGAGAACCACTTGGGGTTCGGCGGCCGTGACCGCT GCCCGGGTCTGA
Upstream 100 bases:
>100_bases GTTTTGGCCCCACAGCCCGGGGCCGGTGGTGCGGCCGTGGCGGCGCCCCACTGTGCTGGTTCTGACTCCTTCTCGAGATT CTCTACAGCTGAGGTGCGCG
Downstream 100 bases:
>100_bases GGCCCGAATGGCTCTGCAACTGAGCTTCGCCGAAGCCAGCGCCACAGGCCCCCGCGCGGAAAATCAGGACGCCTTGCGCC TGGTCACGCCGGCCCCGGCG
Product: nitrate transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 403; Mature: 403
Protein sequence:
>403_residues MNKSFWKSGHTPTLFAAFLYFDLSFMVWYLLGPLAVQIAGDLHLTTQQRGLVVATPILAGAVLRFAMGMLADRLSPKTAG LIGQVIVICALFGAWKLGIHSYEQALLLGLFLGMAGASFAVALPLASQWYPPEHQGKAMGIAGAGNSGTVFAALIAPVLA AAFGWSNVFGFALIPLILTLVLFAWLAKNAPERPRAKAMADYFKALGDRDSWWFMFFYSVTFGGFIGLASALPGYFNDQY GLSPVTAGYYTAACVFGGSLMRPLGGALADRFGGIRTLLAMYTVAAVCIAAVGFNLPSSYAALALFVCTMLGLGAGNGAV FQLVPQRFRREIGVMTGLIGMAGGIGGFALAAGMGAIKQSTGSYQLALWLFASLGVLAWFGLHGVKRRWRTTWGSAAVTA ARV
Sequences:
>Translated_403_residues MNKSFWKSGHTPTLFAAFLYFDLSFMVWYLLGPLAVQIAGDLHLTTQQRGLVVATPILAGAVLRFAMGMLADRLSPKTAG LIGQVIVICALFGAWKLGIHSYEQALLLGLFLGMAGASFAVALPLASQWYPPEHQGKAMGIAGAGNSGTVFAALIAPVLA AAFGWSNVFGFALIPLILTLVLFAWLAKNAPERPRAKAMADYFKALGDRDSWWFMFFYSVTFGGFIGLASALPGYFNDQY GLSPVTAGYYTAACVFGGSLMRPLGGALADRFGGIRTLLAMYTVAAVCIAAVGFNLPSSYAALALFVCTMLGLGAGNGAV FQLVPQRFRREIGVMTGLIGMAGGIGGFALAAGMGAIKQSTGSYQLALWLFASLGVLAWFGLHGVKRRWRTTWGSAAVTA ARV >Mature_403_residues MNKSFWKSGHTPTLFAAFLYFDLSFMVWYLLGPLAVQIAGDLHLTTQQRGLVVATPILAGAVLRFAMGMLADRLSPKTAG LIGQVIVICALFGAWKLGIHSYEQALLLGLFLGMAGASFAVALPLASQWYPPEHQGKAMGIAGAGNSGTVFAALIAPVLA AAFGWSNVFGFALIPLILTLVLFAWLAKNAPERPRAKAMADYFKALGDRDSWWFMFFYSVTFGGFIGLASALPGYFNDQY GLSPVTAGYYTAACVFGGSLMRPLGGALADRFGGIRTLLAMYTVAAVCIAAVGFNLPSSYAALALFVCTMLGLGAGNGAV FQLVPQRFRREIGVMTGLIGMAGGIGGFALAAGMGAIKQSTGSYQLALWLFASLGVLAWFGLHGVKRRWRTTWGSAAVTA ARV
Specific function: May function as a nitrate transporter [H]
COG id: COG2223
COG function: function code P; Nitrate/nitrite transporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Nitrate/nitrite porter (TC 2.A.1.8) family [H]
Homologues:
Organism=Escherichia coli, GI1787475, Length=420, Percent_Identity=26.9047619047619, Blast_Score=81, Evalue=1e-16, Organism=Escherichia coli, GI1787743, Length=419, Percent_Identity=25.7756563245823, Blast_Score=71, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR004737 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 42623; Mature: 42623
Theoretical pI: Translated: 10.18; Mature: 10.18
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKSFWKSGHTPTLFAAFLYFDLSFMVWYLLGPLAVQIAGDLHLTTQQRGLVVATPILAG CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCEEEEHHHHHH AVLRFAMGMLADRLSPKTAGLIGQVIVICALFGAWKLGIHSYEQALLLGLFLGMAGASFA HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH VALPLASQWYPPEHQGKAMGIAGAGNSGTVFAALIAPVLAAAFGWSNVFGFALIPLILTL EECCHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLFAWLAKNAPERPRAKAMADYFKALGDRDSWWFMFFYSVTFGGFIGLASALPGYFNDQY HHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC GLSPVTAGYYTAACVFGGSLMRPLGGALADRFGGIRTLLAMYTVAAVCIAAVGFNLPSSY CCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH AALALFVCTMLGLGAGNGAVFQLVPQRFRREIGVMTGLIGMAGGIGGFALAAGMGAIKQS HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHC TGSYQLALWLFASLGVLAWFGLHGVKRRWRTTWGSAAVTAARV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCC >Mature Secondary Structure MNKSFWKSGHTPTLFAAFLYFDLSFMVWYLLGPLAVQIAGDLHLTTQQRGLVVATPILAG CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCEEEEHHHHHH AVLRFAMGMLADRLSPKTAGLIGQVIVICALFGAWKLGIHSYEQALLLGLFLGMAGASFA HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH VALPLASQWYPPEHQGKAMGIAGAGNSGTVFAALIAPVLAAAFGWSNVFGFALIPLILTL EECCHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLFAWLAKNAPERPRAKAMADYFKALGDRDSWWFMFFYSVTFGGFIGLASALPGYFNDQY HHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC GLSPVTAGYYTAACVFGGSLMRPLGGALADRFGGIRTLLAMYTVAAVCIAAVGFNLPSSY CCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH AALALFVCTMLGLGAGNGAVFQLVPQRFRREIGVMTGLIGMAGGIGGFALAAGMGAIKQS HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHC TGSYQLALWLFASLGVLAWFGLHGVKRRWRTTWGSAAVTAARV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7868621; 8969502; 9384377 [H]