| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is 77457976
Identifier: 77457976
GI number: 77457976
Start: 1940728
End: 1941018
Strand: Direct
Name: 77457976
Synonym: Pfl01_1749
Alternate gene names: NA
Gene position: 1940728-1941018 (Clockwise)
Preceding gene: 77457975
Following gene: 77457979
Centisome position: 30.14
GC content: 51.2
Gene sequence:
>291_bases TTGAGTGACCGCCTCTACGGAAACCCGGCTTTATGCCGGGTTTTTTGCGCCTGCGCGTCATGCGCTGGAACGAATGGCGA CCATACTTTTCGAACGTTTACACATTTGAGATTAATGAGGTGCGCCATGACCCCCGAAACCGAAGGCAAGGAAGAAAAAG GCCCGAGCGGATTGCCGTTTATCAATGATCCTGGGAATGAAGATCCGGGGTCATTGATGGATGATGCGACGGTTCCGCTT TTGGACGGTGAGGAGGAGCTTGAGTATGAGGATTTTGATGATGATGAGTGA
Upstream 100 bases:
>100_bases CGGCGGGTGGCGCGGTCGGCAACAACCTGGGTGACGATGGCGGCAAGTCGCACTCCGGCGGTGGTCATAAGCACAAGTAC AAACACAAGAATCGTCATCG
Downstream 100 bases:
>100_bases TCGGTCACTCGCTTCGTTGAACGTGGCACGCGCCTACTGAACAGCTTTATCCTCCTGAAACTCAATGTGCCGCAGCTAAT TGGTCAACGCTGACTTCCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 96; Mature: 95
Protein sequence:
>96_residues MSDRLYGNPALCRVFCACASCAGTNGDHTFRTFTHLRLMRCAMTPETEGKEEKGPSGLPFINDPGNEDPGSLMDDATVPL LDGEEELEYEDFDDDE
Sequences:
>Translated_96_residues MSDRLYGNPALCRVFCACASCAGTNGDHTFRTFTHLRLMRCAMTPETEGKEEKGPSGLPFINDPGNEDPGSLMDDATVPL LDGEEELEYEDFDDDE >Mature_95_residues SDRLYGNPALCRVFCACASCAGTNGDHTFRTFTHLRLMRCAMTPETEGKEEKGPSGLPFINDPGNEDPGSLMDDATVPLL DGEEELEYEDFDDDE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10581; Mature: 10449
Theoretical pI: Translated: 3.87; Mature: 3.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.2 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 9.4 %Cys+Met (Translated Protein) 5.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 8.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDRLYGNPALCRVFCACASCAGTNGDHTFRTFTHLRLMRCAMTPETEGKEEKGPSGLPF CCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC INDPGNEDPGSLMDDATVPLLDGEEELEYEDFDDDE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SDRLYGNPALCRVFCACASCAGTNGDHTFRTFTHLRLMRCAMTPETEGKEEKGPSGLPF CCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC INDPGNEDPGSLMDDATVPLLDGEEELEYEDFDDDE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA