| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is plsC [H]
Identifier: 77457970
GI number: 77457970
Start: 1936238
End: 1936972
Strand: Reverse
Name: plsC [H]
Synonym: Pfl01_1743
Alternate gene names: 77457970
Gene position: 1936972-1936238 (Counterclockwise)
Preceding gene: 77457971
Following gene: 77457969
Centisome position: 30.08
GC content: 57.69
Gene sequence:
>735_bases ATGGGCCTGAAAATGCTGTTTGTGTTTCGTATGTTATTGATGGGCCTGCACTTTATTCTGGCGGGGATACTCGGAGTGAT CCTCGGGCTGTGCCGGCCATTTAATCCGGACAACAGTCGCCTGTGTGCCCGTCTCTATGCACTGCCGGCCATGTGCATTT TGCGTCTGCGGGTGAAGGCCGATGTTGGCGCGCTAATGAACAAACCCGACAGCTGCGTGATCATCGCCAACCATCAGTCC AACTACGACCTGTTCGTGTTCGGTAACGTGGTGCCGCATCGTACCGTGTGCATCGGCAAGAAAAGCCTGAAGTGGGTACC GCTGTTCGGGCAGCTGTTCTGGCTGGCGGGCAATGTGTTGATCGATCGTGGGAACGCGCACAAGGCGCGCCAGTCGATGC TGACCACCACCGACACCTTGCAGCACAAAGACACCTCGATCTGGGTCTTTCCAGAAGGCACCCGCAACCTGGGTGAAGAA CTGCTGCCGTTCAAGAAAGGCGCTTTCCAGATGGCCATTGCCGCCGGGGTGCCGATCGTTCCGGTGTGTGTCAGCAGCTA CATCAAGCACATGCGCCTGAACCGCTGGCACAGCGGGAAAATTCTTATACGCTCACTACCGGCGATTCCTACGGCCGGCC TGACCATGGACGACATGCCCATGCTCATCAACCAATGCCGCGAGCAGATGCGCGAATGCATCGATGCGATGGATCGGCAG CTGCAAGCCGCGTGA
Upstream 100 bases:
>100_bases AAGTCGGAAACATGCGCTTAAACATCGCCCATCTCCAGACTCTATAGCGGCAATTGCCGAAAACAGTGCACATCCGTACA CTGCGCCACCTTTTGTCCCG
Downstream 100 bases:
>100_bases AAAAGAAGCCCGCCCTGTGCGGGTTTTCTTTTGCCCGCTGAACTGTGCAGATTTCACTGACTCTCAAGCAGCGACACGGC TAAGCTGAAGCCATGTCTCT
Product: 1-acyl-sn-glycerol-3-phosphate acyltransferase
Products: NA
Alternate protein names: 1-AGP acyltransferase; 1-AGPAT; Lysophosphatidic acid acyltransferase; LPAAT; Phosphatidic acid synthase; PA synthase [H]
Number of amino acids: Translated: 244; Mature: 243
Protein sequence:
>244_residues MGLKMLFVFRMLLMGLHFILAGILGVILGLCRPFNPDNSRLCARLYALPAMCILRLRVKADVGALMNKPDSCVIIANHQS NYDLFVFGNVVPHRTVCIGKKSLKWVPLFGQLFWLAGNVLIDRGNAHKARQSMLTTTDTLQHKDTSIWVFPEGTRNLGEE LLPFKKGAFQMAIAAGVPIVPVCVSSYIKHMRLNRWHSGKILIRSLPAIPTAGLTMDDMPMLINQCREQMRECIDAMDRQ LQAA
Sequences:
>Translated_244_residues MGLKMLFVFRMLLMGLHFILAGILGVILGLCRPFNPDNSRLCARLYALPAMCILRLRVKADVGALMNKPDSCVIIANHQS NYDLFVFGNVVPHRTVCIGKKSLKWVPLFGQLFWLAGNVLIDRGNAHKARQSMLTTTDTLQHKDTSIWVFPEGTRNLGEE LLPFKKGAFQMAIAAGVPIVPVCVSSYIKHMRLNRWHSGKILIRSLPAIPTAGLTMDDMPMLINQCREQMRECIDAMDRQ LQAA >Mature_243_residues GLKMLFVFRMLLMGLHFILAGILGVILGLCRPFNPDNSRLCARLYALPAMCILRLRVKADVGALMNKPDSCVIIANHQSN YDLFVFGNVVPHRTVCIGKKSLKWVPLFGQLFWLAGNVLIDRGNAHKARQSMLTTTDTLQHKDTSIWVFPEGTRNLGEEL LPFKKGAFQMAIAAGVPIVPVCVSSYIKHMRLNRWHSGKILIRSLPAIPTAGLTMDDMPMLINQCREQMRECIDAMDRQL QAA
Specific function: Converts lysophosphatidic acid (LPA) into phosphatidic acid by incorporating an acyl moiety at the 2 position. This enzyme can utilize either acyl-CoA or acyl-ACP as the fatty acyl donor [H]
COG id: COG0204
COG function: function code I; 1-acyl-sn-glycerol-3-phosphate acyltransferase
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI5453718, Length=226, Percent_Identity=36.283185840708, Blast_Score=140, Evalue=1e-33, Organism=Homo sapiens, GI15100175, Length=226, Percent_Identity=36.283185840708, Blast_Score=140, Evalue=1e-33, Organism=Homo sapiens, GI6041665, Length=168, Percent_Identity=38.0952380952381, Blast_Score=127, Evalue=1e-29, Organism=Homo sapiens, GI69122971, Length=168, Percent_Identity=29.7619047619048, Blast_Score=74, Evalue=1e-13, Organism=Escherichia coli, GI1789395, Length=237, Percent_Identity=40.084388185654, Blast_Score=189, Evalue=2e-49, Organism=Caenorhabditis elegans, GI17564032, Length=161, Percent_Identity=38.5093167701863, Blast_Score=124, Evalue=5e-29, Organism=Caenorhabditis elegans, GI17568319, Length=235, Percent_Identity=31.9148936170213, Blast_Score=110, Evalue=7e-25, Organism=Saccharomyces cerevisiae, GI6320151, Length=243, Percent_Identity=33.7448559670782, Blast_Score=118, Evalue=8e-28, Organism=Drosophila melanogaster, GI24641614, Length=242, Percent_Identity=33.4710743801653, Blast_Score=127, Evalue=5e-30, Organism=Drosophila melanogaster, GI24641612, Length=242, Percent_Identity=33.4710743801653, Blast_Score=127, Evalue=5e-30, Organism=Drosophila melanogaster, GI281364648, Length=242, Percent_Identity=31.8181818181818, Blast_Score=116, Evalue=1e-26, Organism=Drosophila melanogaster, GI24582856, Length=242, Percent_Identity=31.8181818181818, Blast_Score=116, Evalue=1e-26, Organism=Drosophila melanogaster, GI24582854, Length=242, Percent_Identity=31.8181818181818, Blast_Score=116, Evalue=1e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002123 - InterPro: IPR004552 [H]
Pfam domain/function: PF01553 Acyltransferase [H]
EC number: =2.3.1.51 [H]
Molecular weight: Translated: 27345; Mature: 27214
Theoretical pI: Translated: 10.05; Mature: 10.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 9.0 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 8.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLKMLFVFRMLLMGLHFILAGILGVILGLCRPFNPDNSRLCARLYALPAMCILRLRVKA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH DVGALMNKPDSCVIIANHQSNYDLFVFGNVVPHRTVCIGKKSLKWVPLFGQLFWLAGNVL HHHHHHCCCCCEEEEEECCCCCEEEEECCCCCCCEEEECCCCCEEHHHHHHHHHHHCCCE IDRGNAHKARQSMLTTTDTLQHKDTSIWVFPEGTRNLGEELLPFKKGAFQMAIAAGVPIV EECCCHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHCCHHHHHHHCCCCHH PVCVSSYIKHMRLNRWHSGKILIRSLPAIPTAGLTMDDMPMLINQCREQMRECIDAMDRQ HHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH LQAA HCCC >Mature Secondary Structure GLKMLFVFRMLLMGLHFILAGILGVILGLCRPFNPDNSRLCARLYALPAMCILRLRVKA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH DVGALMNKPDSCVIIANHQSNYDLFVFGNVVPHRTVCIGKKSLKWVPLFGQLFWLAGNVL HHHHHHCCCCCEEEEEECCCCCEEEEECCCCCCCEEEECCCCCEEHHHHHHHHHHHCCCE IDRGNAHKARQSMLTTTDTLQHKDTSIWVFPEGTRNLGEELLPFKKGAFQMAIAAGVPIV EECCCHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHCCHHHHHHHCCCCHH PVCVSSYIKHMRLNRWHSGKILIRSLPAIPTAGLTMDDMPMLINQCREQMRECIDAMDRQ HHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH LQAA HCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 1557036; 9278503 [H]