| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is aroC [H]
Identifier: 77457949
GI number: 77457949
Start: 1915571
End: 1916662
Strand: Direct
Name: aroC [H]
Synonym: Pfl01_1722
Alternate gene names: 77457949
Gene position: 1915571-1916662 (Clockwise)
Preceding gene: 77457946
Following gene: 77457950
Centisome position: 29.75
GC content: 64.1
Gene sequence:
>1092_bases ATGTCCGGCAATACCTACGGCAAGCTGTTCACTGTCACCACCGCGGGCGAAAGCCATGGTCCGGCGTTGGTCGCCATTGT CGACGGCTGCCCGCCGGGCCTGGAGATTTCCCTTGAAGATCTGCAACGCGACCTCGACCGTCGCAAGCCGGGCACCAGCC GCCACACCACCCAGCGCCAGGAAGCCGACGAAGTCGAAATCCTTTCCGGCGTGTTCGAGGGCCGCACCACCGGCTGCTCC ATTGGCCTGCTGATTCGCAACACCGACCAGAAGTCCAAGGACTACTCGGCGATCAAGGACCTGTTCCGCCCGGCCCACGC CGACTACACCTACCACCACAAATACGGCGAGCGCGATTATCGCGGCGGCGGTCGCAGCTCCGCGCGGGAAACCGCCATGC GCGTCGCGGCTGGCGCCATCGCCAAGAAGTACCTGGCCAGCCAAGGCATCGTCATTCGCGGCTACATGAGCCAGCTCGGC CCGATCGAAATCCCGTTCAAGACCTGGGAATCGGTCGAGCAGAATGCCTTCTTCAGCCCGGACCCGGACAAAGTGCCGGA GCTGGAAGCTTATATGGATCAGTTGCGCCGCGATCAGGATTCCGTCGGGGCGAAGATCACCGTGGTTGCCGAAGGCGTGA TGCCGGGCCTGGGCGAGCCGATCTTCGACCGTCTCGATGCCGAACTGGCCCATGCGCTGATGAGCATCAACGCGGTCAAA GGTGTGGAAATCGGCGCCGGTTTCGCCTGCGTCGCCCAGCGCGGCACCGAACACCGTGACGAGCTGACCCCGGAAGGTTT CCTCAGCAACAACGCGGGCGGCATCCTTGGCGGGATCTCTTCGGGGCAGCCGATCGTCGCGCACCTGGCCTTGAAGCCGA CCTCGAGCATCACCACCCCGGGCCGTTCGATCGACATCGATGGCAACCCGGTCGATGTCATTACCAAGGGCCGTCACGAC CCATGTGTCGGTATCCGCGCCACGCCGATTGCCGAGGCGATGATGGCCATCGTGTTGATGGATCACCTGCTGCGCCACCG TGGCCAGAACGCCGATGTGCGCGTGAGCACCCCGGTGCTGGGTCAGCTTTGA
Upstream 100 bases:
>100_bases ACTCACCCGCACCGCTAAGGTTCGAGGATGAACTACTCGGTTAGCCTGCGTATACTGGCGCGCATCACGAATCTGGGTTC GATTTCACGGAGCGTCCTGC
Downstream 100 bases:
>100_bases TGGGTGATCTCAAAGCCGCCGCGGTCTGACCGTGGCGGCGCTCCCGTACTGGCGGCTGTCCAGTTTCTATCTGTTCTATT TCGCCTTGCTCGGTTCGACG
Product: chorismate synthase
Products: NA
Alternate protein names: 5-enolpyruvylshikimate-3-phosphate phospholyase [H]
Number of amino acids: Translated: 363; Mature: 362
Protein sequence:
>363_residues MSGNTYGKLFTVTTAGESHGPALVAIVDGCPPGLEISLEDLQRDLDRRKPGTSRHTTQRQEADEVEILSGVFEGRTTGCS IGLLIRNTDQKSKDYSAIKDLFRPAHADYTYHHKYGERDYRGGGRSSARETAMRVAAGAIAKKYLASQGIVIRGYMSQLG PIEIPFKTWESVEQNAFFSPDPDKVPELEAYMDQLRRDQDSVGAKITVVAEGVMPGLGEPIFDRLDAELAHALMSINAVK GVEIGAGFACVAQRGTEHRDELTPEGFLSNNAGGILGGISSGQPIVAHLALKPTSSITTPGRSIDIDGNPVDVITKGRHD PCVGIRATPIAEAMMAIVLMDHLLRHRGQNADVRVSTPVLGQL
Sequences:
>Translated_363_residues MSGNTYGKLFTVTTAGESHGPALVAIVDGCPPGLEISLEDLQRDLDRRKPGTSRHTTQRQEADEVEILSGVFEGRTTGCS IGLLIRNTDQKSKDYSAIKDLFRPAHADYTYHHKYGERDYRGGGRSSARETAMRVAAGAIAKKYLASQGIVIRGYMSQLG PIEIPFKTWESVEQNAFFSPDPDKVPELEAYMDQLRRDQDSVGAKITVVAEGVMPGLGEPIFDRLDAELAHALMSINAVK GVEIGAGFACVAQRGTEHRDELTPEGFLSNNAGGILGGISSGQPIVAHLALKPTSSITTPGRSIDIDGNPVDVITKGRHD PCVGIRATPIAEAMMAIVLMDHLLRHRGQNADVRVSTPVLGQL >Mature_362_residues SGNTYGKLFTVTTAGESHGPALVAIVDGCPPGLEISLEDLQRDLDRRKPGTSRHTTQRQEADEVEILSGVFEGRTTGCSI GLLIRNTDQKSKDYSAIKDLFRPAHADYTYHHKYGERDYRGGGRSSARETAMRVAAGAIAKKYLASQGIVIRGYMSQLGP IEIPFKTWESVEQNAFFSPDPDKVPELEAYMDQLRRDQDSVGAKITVVAEGVMPGLGEPIFDRLDAELAHALMSINAVKG VEIGAGFACVAQRGTEHRDELTPEGFLSNNAGGILGGISSGQPIVAHLALKPTSSITTPGRSIDIDGNPVDVITKGRHDP CVGIRATPIAEAMMAIVLMDHLLRHRGQNADVRVSTPVLGQL
Specific function: Aromatic amino acids biosynthesis; shikimate pathway; seventh step. [C]
COG id: COG0082
COG function: function code E; Chorismate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chorismate synthase family [H]
Homologues:
Organism=Escherichia coli, GI1788669, Length=359, Percent_Identity=71.5877437325905, Blast_Score=498, Evalue=1e-142, Organism=Saccharomyces cerevisiae, GI6321290, Length=368, Percent_Identity=41.0326086956522, Blast_Score=270, Evalue=3e-73,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000453 - InterPro: IPR020541 [H]
Pfam domain/function: PF01264 Chorismate_synt [H]
EC number: =4.2.3.5 [H]
Molecular weight: Translated: 39097; Mature: 38966
Theoretical pI: Translated: 6.29; Mature: 6.29
Prosite motif: PS00787 CHORISMATE_SYNTHASE_1 ; PS00788 CHORISMATE_SYNTHASE_2 ; PS00789 CHORISMATE_SYNTHASE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGNTYGKLFTVTTAGESHGPALVAIVDGCPPGLEISLEDLQRDLDRRKPGTSRHTTQRQ CCCCCCEEEEEEEECCCCCCCEEEEEECCCCCCCEEEHHHHHHHHHHCCCCCCCCCCHHH EADEVEILSGVFEGRTTGCSIGLLIRNTDQKSKDYSAIKDLFRPAHADYTYHHKYGERDY HHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCC RGGGRSSARETAMRVAAGAIAKKYLASQGIVIRGYMSQLGPIEIPFKTWESVEQNAFFSP CCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHCCCEECCHHHHHHHHHCCCCCC DPDKVPELEAYMDQLRRDQDSVGAKITVVAEGVMPGLGEPIFDRLDAELAHALMSINAVK CCCCCCHHHHHHHHHHCCHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHC GVEIGAGFACVAQRGTEHRDELTPEGFLSNNAGGILGGISSGQPIVAHLALKPTSSITTP CEECCCCHHHHHHCCCCHHHHCCCCCCCCCCCCCEEECCCCCCCEEEEEEECCCCCCCCC GRSIDIDGNPVDVITKGRHDPCVGIRATPIAEAMMAIVLMDHLLRHRGQNADVRVSTPVL CCEEECCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHH GQL CCC >Mature Secondary Structure SGNTYGKLFTVTTAGESHGPALVAIVDGCPPGLEISLEDLQRDLDRRKPGTSRHTTQRQ CCCCCEEEEEEEECCCCCCCEEEEEECCCCCCCEEEHHHHHHHHHHCCCCCCCCCCHHH EADEVEILSGVFEGRTTGCSIGLLIRNTDQKSKDYSAIKDLFRPAHADYTYHHKYGERDY HHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCC RGGGRSSARETAMRVAAGAIAKKYLASQGIVIRGYMSQLGPIEIPFKTWESVEQNAFFSP CCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHCCCEECCHHHHHHHHHCCCCCC DPDKVPELEAYMDQLRRDQDSVGAKITVVAEGVMPGLGEPIFDRLDAELAHALMSINAVK CCCCCCHHHHHHHHHHCCHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHC GVEIGAGFACVAQRGTEHRDELTPEGFLSNNAGGILGGISSGQPIVAHLALKPTSSITTP CEECCCCHHHHHHCCCCHHHHCCCCCCCCCCCCCEEECCCCCCCEEEEEEECCCCCCCCC GRSIDIDGNPVDVITKGRHDPCVGIRATPIAEAMMAIVLMDHLLRHRGQNADVRVSTPVL CCEEECCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHH GQL CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA