| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is mas [H]
Identifier: 77457907
GI number: 77457907
Start: 1876884
End: 1877846
Strand: Direct
Name: mas [H]
Synonym: Pfl01_1680
Alternate gene names: 77457907
Gene position: 1876884-1877846 (Clockwise)
Preceding gene: 77457904
Following gene: 77457914
Centisome position: 29.15
GC content: 62.93
Gene sequence:
>963_bases GTGAAGGCATTGCAAGGCGTTGAAGGTCAAGTGGCATGGGTTGATGAACCAAGTCCTACATGTGATGTAGGACAAGTTCG CATCCGGGTGGCGGCAGCGGGCCTCAATCGCGCGGATTTATTACAGAAAGCCGGTCTTTATCCACCCCCTCCAGGTGCCA GCCACGTGCTGGGTCTTGAATGCTCCGGGGTGATCAGCGAGGTCGGCGCGGGCTCGTCCTGGCAGGTCGGTGACCGGGTC TGCGCCTTGCTGGCCGGGGGCGGGATGGCGCAAGAGGTGGTCGTCGACGGACGGCATGTGCTGCCGGTTCCGGAAGGCGT GTCGCTGATTGAAGCGGCGGCGTTGCCCGAGGTTTACGCGACCGTCTGGCTGAATGTGTTTCAACTCGCTGCGCTCAAAC CGGGTGAGAAAGTTCTTCTGCACGCCGGGGCCAGTGGCATCGGCTCGGCCGCCATTCAACTGTGCAAGGCTTTCGGCAAT CCGTGCTGGGTCAGCGTCGGCTCGGCCGAGCGGCTGGCCTACTGCGAATCGCTGGGTGCCCAGGGCGGGGTGGTGCGCAC CGACGATCTGGAAAGCCTGCGGGATTTCGGGCCGTTCGATGTGATCCTCGATCCGGTGGGCGGCAATTATTCGGCGTTGA ATCTGAAGTTGCTGGCCCAGGACGGACGCTGGGTGCTGATCGGTCTGATGGGCGGCCGTGAGGCAAAACTGGATCTGGCC CAGGTGCTGGCCAAGCGCGTGCAACTGCTGGGCTCGACCCTGCGCAGCCGTGACGATCAGTTCAAGGCCGACCTGTTCAG CGATCTGAGCCAGCACGTGTGGCCGCTGTTTTCCGAAGGGCGCCTGAAGCCGCAACTGGCCAAGGCTTTCCCGATCAAGG ATGCCGAGGCTGCGTTTGCAGAGCTTGCGAGCAACACCGTGGCAGGGAAGCTGGTGCTGGTGATCGACGAAAGCCTGAGC TGA
Upstream 100 bases:
>100_bases CTGCTGTTCAGCGTTCGTTCAGACCCCAGGGCCGGTCGCATAATGCAAAAAGCCCGGCGCTACAGCTTCGGGCTCAGTCC AGACTCACTATGGAGGCACT
Downstream 100 bases:
>100_bases TCATCATTGCTTGTGGGAGCAGGTCTGCTCCCACAAGACCATCGCTTACTTCCAGAGGTGGATCGGCCAGCCGGACTTCT CGGCCTCTGCCAGCAACACC
Product: zinc-containing alcohol dehydrogenase superfamily protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 320; Mature: 320
Protein sequence:
>320_residues MKALQGVEGQVAWVDEPSPTCDVGQVRIRVAAAGLNRADLLQKAGLYPPPPGASHVLGLECSGVISEVGAGSSWQVGDRV CALLAGGGMAQEVVVDGRHVLPVPEGVSLIEAAALPEVYATVWLNVFQLAALKPGEKVLLHAGASGIGSAAIQLCKAFGN PCWVSVGSAERLAYCESLGAQGGVVRTDDLESLRDFGPFDVILDPVGGNYSALNLKLLAQDGRWVLIGLMGGREAKLDLA QVLAKRVQLLGSTLRSRDDQFKADLFSDLSQHVWPLFSEGRLKPQLAKAFPIKDAEAAFAELASNTVAGKLVLVIDESLS
Sequences:
>Translated_320_residues MKALQGVEGQVAWVDEPSPTCDVGQVRIRVAAAGLNRADLLQKAGLYPPPPGASHVLGLECSGVISEVGAGSSWQVGDRV CALLAGGGMAQEVVVDGRHVLPVPEGVSLIEAAALPEVYATVWLNVFQLAALKPGEKVLLHAGASGIGSAAIQLCKAFGN PCWVSVGSAERLAYCESLGAQGGVVRTDDLESLRDFGPFDVILDPVGGNYSALNLKLLAQDGRWVLIGLMGGREAKLDLA QVLAKRVQLLGSTLRSRDDQFKADLFSDLSQHVWPLFSEGRLKPQLAKAFPIKDAEAAFAELASNTVAGKLVLVIDESLS >Mature_320_residues MKALQGVEGQVAWVDEPSPTCDVGQVRIRVAAAGLNRADLLQKAGLYPPPPGASHVLGLECSGVISEVGAGSSWQVGDRV CALLAGGGMAQEVVVDGRHVLPVPEGVSLIEAAALPEVYATVWLNVFQLAALKPGEKVLLHAGASGIGSAAIQLCKAFGN PCWVSVGSAERLAYCESLGAQGGVVRTDDLESLRDFGPFDVILDPVGGNYSALNLKLLAQDGRWVLIGLMGGREAKLDLA QVLAKRVQLLGSTLRSRDDQFKADLFSDLSQHVWPLFSEGRLKPQLAKAFPIKDAEAAFAELASNTVAGKLVLVIDESLS
Specific function: Catalyzes the elongation of N-fatty acyl-CoA with methylamalonyl-CoA (not malonyl-CoA) as the elongating agent to form mycocerosyl lipids [H]
COG id: COG0604
COG function: function code CR; NADPH:quinone reductase and related Zn-dependent oxidoreductases
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 acyl carrier domain [H]
Homologues:
Organism=Homo sapiens, GI22538446, Length=322, Percent_Identity=43.167701863354, Blast_Score=222, Evalue=4e-58, Organism=Homo sapiens, GI22538444, Length=322, Percent_Identity=43.167701863354, Blast_Score=222, Evalue=4e-58, Organism=Homo sapiens, GI18379349, Length=311, Percent_Identity=29.903536977492, Blast_Score=125, Evalue=5e-29, Organism=Homo sapiens, GI24308257, Length=320, Percent_Identity=24.6875, Blast_Score=104, Evalue=1e-22, Organism=Homo sapiens, GI194239674, Length=299, Percent_Identity=26.7558528428094, Blast_Score=89, Evalue=6e-18, Organism=Homo sapiens, GI13236495, Length=299, Percent_Identity=26.7558528428094, Blast_Score=89, Evalue=6e-18, Organism=Homo sapiens, GI41872631, Length=326, Percent_Identity=26.9938650306748, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI28557745, Length=240, Percent_Identity=29.5833333333333, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI194239676, Length=294, Percent_Identity=24.8299319727891, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI47519420, Length=331, Percent_Identity=24.773413897281, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI67078404, Length=304, Percent_Identity=25.6578947368421, Blast_Score=66, Evalue=4e-11, Organism=Escherichia coli, GI1790485, Length=307, Percent_Identity=28.3387622149837, Blast_Score=87, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17507255, Length=310, Percent_Identity=28.0645161290323, Blast_Score=94, Evalue=7e-20, Organism=Caenorhabditis elegans, GI212642053, Length=335, Percent_Identity=26.865671641791, Blast_Score=78, Evalue=5e-15, Organism=Caenorhabditis elegans, GI71987554, Length=371, Percent_Identity=24.7978436657682, Blast_Score=71, Evalue=6e-13, Organism=Caenorhabditis elegans, GI17536829, Length=282, Percent_Identity=26.5957446808511, Blast_Score=65, Evalue=4e-11, Organism=Saccharomyces cerevisiae, GI6319520, Length=323, Percent_Identity=26.0061919504644, Blast_Score=83, Evalue=7e-17, Organism=Drosophila melanogaster, GI19920632, Length=271, Percent_Identity=25.830258302583, Blast_Score=76, Evalue=3e-14, Organism=Drosophila melanogaster, GI221330659, Length=271, Percent_Identity=25.830258302583, Blast_Score=76, Evalue=3e-14, Organism=Drosophila melanogaster, GI24581345, Length=333, Percent_Identity=25.5255255255255, Blast_Score=75, Evalue=9e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001227 - InterPro: IPR009081 - InterPro: IPR014043 - InterPro: IPR016035 - InterPro: IPR013149 - InterPro: IPR013154 - InterPro: IPR000794 - InterPro: IPR011032 - InterPro: IPR018201 - InterPro: IPR014031 - InterPro: IPR014030 - InterPro: IPR016036 - InterPro: IPR016040 - InterPro: IPR006163 - InterPro: IPR020842 - InterPro: IPR020801 - InterPro: IPR020841 - InterPro: IPR020807 - InterPro: IPR020843 - InterPro: IPR013968 - InterPro: IPR006162 - InterPro: IPR016039 - InterPro: IPR016038 [H]
Pfam domain/function: PF00698 Acyl_transf_1; PF08240 ADH_N; PF00107 ADH_zinc_N; PF00109 ketoacyl-synt; PF02801 Ketoacyl-synt_C; PF08659 KR; PF00550 PP-binding [H]
EC number: =2.3.1.111 [H]
Molecular weight: Translated: 33583; Mature: 33583
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKALQGVEGQVAWVDEPSPTCDVGQVRIRVAAAGLNRADLLQKAGLYPPPPGASHVLGLE CCCCCCCCCEEEEECCCCCCCCCCCEEEEEEECCCCHHHHHHHCCCCCCCCCCCCEEEEE CSGVISEVGAGSSWQVGDRVCALLAGGGMAQEVVVDGRHVLPVPEGVSLIEAAALPEVYA HHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHEECCCEEECCCCCHHHHHHHHHHHHHH TVWLNVFQLAALKPGEKVLLHAGASGIGSAAIQLCKAFGNPCWVSVGSAERLAYCESLGA HHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCC QGGVVRTDDLESLRDFGPFDVILDPVGGNYSALNLKLLAQDGRWVLIGLMGGREAKLDLA CCCEEECCCHHHHHCCCCEEEEEECCCCCEEEEEEEEEECCCCEEEEEECCCCCHHHHHH QVLAKRVQLLGSTLRSRDDQFKADLFSDLSQHVWPLFSEGRLKPQLAKAFPIKDAEAAFA HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHCCCCCCHHHHHHCCCCCHHHHHH ELASNTVAGKLVLVIDESLS HHHCCCCCCEEEEEEECCCC >Mature Secondary Structure MKALQGVEGQVAWVDEPSPTCDVGQVRIRVAAAGLNRADLLQKAGLYPPPPGASHVLGLE CCCCCCCCCEEEEECCCCCCCCCCCEEEEEEECCCCHHHHHHHCCCCCCCCCCCCEEEEE CSGVISEVGAGSSWQVGDRVCALLAGGGMAQEVVVDGRHVLPVPEGVSLIEAAALPEVYA HHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHEECCCEEECCCCCHHHHHHHHHHHHHH TVWLNVFQLAALKPGEKVLLHAGASGIGSAAIQLCKAFGNPCWVSVGSAERLAYCESLGA HHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCC QGGVVRTDDLESLRDFGPFDVILDPVGGNYSALNLKLLAQDGRWVLIGLMGGREAKLDLA CCCEEECCCHHHHHCCCCEEEEEECCCCCEEEEEEEEEECCCCEEEEEECCCCCHHHHHH QVLAKRVQLLGSTLRSRDDQFKADLFSDLSQHVWPLFSEGRLKPQLAKAFPIKDAEAAFA HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHCCCCCCHHHHHHCCCCCHHHHHH ELASNTVAGKLVLVIDESLS HHHCCCCCCEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 1527058; 12788972 [H]