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The map label for this gene is rdgC [H]

Identifier: 77457895

GI number: 77457895

Start: 1859536

End: 1860456

Strand: Reverse

Name: rdgC [H]

Synonym: Pfl01_1668

Alternate gene names: 77457895

Gene position: 1860456-1859536 (Counterclockwise)

Preceding gene: 77457896

Following gene: 77457894

Centisome position: 28.9

GC content: 60.37

Gene sequence:

>921_bases
ATGTGGTTCAAAAACCTGCTTATCTATCGCCTGACCCAAGACCTGCCTGTCGATGCCGAGGCGCTGGAAACTGCACTGGC
CACCAAACTGGCGCGTCCATGTGCAAGCCAGGAGTTGACCACTTACGGTTTCGTCGCGCCGTTCGGCAAGGGCGAAGATG
CTCCACTGGTGCACGTCAGCGGTGACTTTCTGCTGATCTCCGCCCGTAAAGAAGAACGCATTCTGCCGGGCAGCGTCGTG
CGTGACGCGGTCAAGGAAAAGGTCGAAGAGATCGAAGCCGAGCAGATGCGCAAGGTCTATAAGAAGGAACGCGATCAGAT
CAAGGATGAAATCATCCAGGCGTTCCTGCCGCGCGCCTTTATCCGCCGCTCTTCGACCTTCGCCGCCATCGCGCCGAAAC
AGGGCTTGATCCTGGTCAACTCGGCCAGCCCAAAACGCGCCGAAGACCTGCTCTCTACCCTGCGTGAAGTGATCGGGACC
CTGCCGGTTCGCCCGCTGACCGTGAAAACCGCGCCGACCGCCGTGATGACCGAGTGGGTCACCACCCAGCAAGCCGCCCC
GGACTTCTTTGTGCTGGACGAGTGCGAACTGCGCGACACCCACGAAGACGGCGGCATCGTGCGTTGCAAGCGTCAGGACC
TGACCAGCGAAGAAATCCAGCTGCACCTGAGCACCGGCAAGGTGGTGACTCAACTGTCGTTGGCCTGGCAGGACAAACTG
TCGTTCATGCTCGACGACAAGATGACCGTCAAGCGCCTGAAGTTCGAAGATCTGTTGCAGGATCAGGCGGAACAGGACGG
CGGCGACGAAGCCCTCGGCCAACTGGACGCCAGCTTCACCCTGATGATGCTGACGTTCGGCGACTTCCTGCCGGCGCTGG
TTGAAGCACTGGGCGGCGAAGAGACACCGCAGGGGATCTAA

Upstream 100 bases:

>100_bases
AAATAATTTTCTTAGCCCTTCCAAAGGCTTAGAGAAGGGTTGGCCTATGACCCGGCGAAGACAATAATGCCCCCCTTTGT
ATAAAGGAGAGACTCACCCC

Downstream 100 bases:

>100_bases
GCCTCTGCGCAGTCTTTGGGTTATCTTCAAACGCCACCGCTTCGGTGGCGTTTTCACATAATAAGGAACAGGCCATGCGC
GCACTGGCTGCACTGAGTCG

Product: recombination associated protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MWFKNLLIYRLTQDLPVDAEALETALATKLARPCASQELTTYGFVAPFGKGEDAPLVHVSGDFLLISARKEERILPGSVV
RDAVKEKVEEIEAEQMRKVYKKERDQIKDEIIQAFLPRAFIRRSSTFAAIAPKQGLILVNSASPKRAEDLLSTLREVIGT
LPVRPLTVKTAPTAVMTEWVTTQQAAPDFFVLDECELRDTHEDGGIVRCKRQDLTSEEIQLHLSTGKVVTQLSLAWQDKL
SFMLDDKMTVKRLKFEDLLQDQAEQDGGDEALGQLDASFTLMMLTFGDFLPALVEALGGEETPQGI

Sequences:

>Translated_306_residues
MWFKNLLIYRLTQDLPVDAEALETALATKLARPCASQELTTYGFVAPFGKGEDAPLVHVSGDFLLISARKEERILPGSVV
RDAVKEKVEEIEAEQMRKVYKKERDQIKDEIIQAFLPRAFIRRSSTFAAIAPKQGLILVNSASPKRAEDLLSTLREVIGT
LPVRPLTVKTAPTAVMTEWVTTQQAAPDFFVLDECELRDTHEDGGIVRCKRQDLTSEEIQLHLSTGKVVTQLSLAWQDKL
SFMLDDKMTVKRLKFEDLLQDQAEQDGGDEALGQLDASFTLMMLTFGDFLPALVEALGGEETPQGI
>Mature_306_residues
MWFKNLLIYRLTQDLPVDAEALETALATKLARPCASQELTTYGFVAPFGKGEDAPLVHVSGDFLLISARKEERILPGSVV
RDAVKEKVEEIEAEQMRKVYKKERDQIKDEIIQAFLPRAFIRRSSTFAAIAPKQGLILVNSASPKRAEDLLSTLREVIGT
LPVRPLTVKTAPTAVMTEWVTTQQAAPDFFVLDECELRDTHEDGGIVRCKRQDLTSEEIQLHLSTGKVVTQLSLAWQDKL
SFMLDDKMTVKRLKFEDLLQDQAEQDGGDEALGQLDASFTLMMLTFGDFLPALVEALGGEETPQGI

Specific function: May be involved in recombination [H]

COG id: COG2974

COG function: function code L; DNA recombination-dependent growth factor C

Gene ontology:

Cell location: Cytoplasm, nucleoid [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rdgC family [H]

Homologues:

Organism=Escherichia coli, GI1786592, Length=300, Percent_Identity=45.6666666666667, Blast_Score=272, Evalue=2e-74,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007476 [H]

Pfam domain/function: PF04381 RdgC [H]

EC number: NA

Molecular weight: Translated: 34124; Mature: 34124

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWFKNLLIYRLTQDLPVDAEALETALATKLARPCASQELTTYGFVAPFGKGEDAPLVHVS
CCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHEEECCCCCCCCCCEEEEC
GDFLLISARKEERILPGSVVRDAVKEKVEEIEAEQMRKVYKKERDQIKDEIIQAFLPRAF
CCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IRRSSTFAAIAPKQGLILVNSASPKRAEDLLSTLREVIGTLPVRPLTVKTAPTAVMTEWV
HHCCCCEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHH
TTQQAAPDFFVLDECELRDTHEDGGIVRCKRQDLTSEEIQLHLSTGKVVTQLSLAWQDKL
HHHHCCCCEEEECCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCHHHHHHHHHHHHHH
SFMLDDKMTVKRLKFEDLLQDQAEQDGGDEALGQLDASFTLMMLTFGDFLPALVEALGGE
HHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCC
ETPQGI
CCCCCC
>Mature Secondary Structure
MWFKNLLIYRLTQDLPVDAEALETALATKLARPCASQELTTYGFVAPFGKGEDAPLVHVS
CCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHEEECCCCCCCCCCEEEEC
GDFLLISARKEERILPGSVVRDAVKEKVEEIEAEQMRKVYKKERDQIKDEIIQAFLPRAF
CCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IRRSSTFAAIAPKQGLILVNSASPKRAEDLLSTLREVIGTLPVRPLTVKTAPTAVMTEWV
HHCCCCEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHH
TTQQAAPDFFVLDECELRDTHEDGGIVRCKRQDLTSEEIQLHLSTGKVVTQLSLAWQDKL
HHHHCCCCEEEECCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCHHHHHHHHHHHHHH
SFMLDDKMTVKRLKFEDLLQDQAEQDGGDEALGQLDASFTLMMLTFGDFLPALVEALGGE
HHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCC
ETPQGI
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA