| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is sugE [H]
Identifier: 77457893
GI number: 77457893
Start: 1858063
End: 1858377
Strand: Reverse
Name: sugE [H]
Synonym: Pfl01_1666
Alternate gene names: 77457893
Gene position: 1858377-1858063 (Counterclockwise)
Preceding gene: 77457894
Following gene: 77457888
Centisome position: 28.86
GC content: 60.95
Gene sequence:
>315_bases ATGTCCTGGATCATTCTGTTTTTCGCCGGCCTGTTCGAAGTCGGCTGGGCCGTCGGCCTGAAATACACCGATGGTTTCAC CCGTCCGCTTCCGACCGTTCTCACCGTTGCCGCCATGGCAGTCAGCTTGGGCTTGCTGGGGCTGGCGATGAAGGAACTAC CGCTGGGCACGGCTTATGCGATCTGGACCGGGGTCGGTGCCGTGGGCACGGTGATTGCCGGAATCATTTTGTTTGGCGAA TCGATGGCGTTGATCCGCCTGGCCAGTGTGGCGTTGATCGTCGCAGGGCTGATCGGGCTCAAGGTCAGCGCCTGA
Upstream 100 bases:
>100_bases CGCACATTTTTAGGTAGTATGTGCGCCACGCGGGGACGACCCTGCGGCTCAATCGAGTTTTCAATCTGGGGACGGCCCCG TCAATCGATGGAGGTCTTTC
Downstream 100 bases:
>100_bases GCCGTTGCCGCCATCCGTCAGAGATGGCGGCTTTCTTAACAACTACCTGACAGTCCCGCGCAACTCCCCGACCAACGCCT GCAACTCCGCCGGCTGCGCC
Product: small multidrug resistance protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 104; Mature: 103
Protein sequence:
>104_residues MSWIILFFAGLFEVGWAVGLKYTDGFTRPLPTVLTVAAMAVSLGLLGLAMKELPLGTAYAIWTGVGAVGTVIAGIILFGE SMALIRLASVALIVAGLIGLKVSA
Sequences:
>Translated_104_residues MSWIILFFAGLFEVGWAVGLKYTDGFTRPLPTVLTVAAMAVSLGLLGLAMKELPLGTAYAIWTGVGAVGTVIAGIILFGE SMALIRLASVALIVAGLIGLKVSA >Mature_103_residues SWIILFFAGLFEVGWAVGLKYTDGFTRPLPTVLTVAAMAVSLGLLGLAMKELPLGTAYAIWTGVGAVGTVIAGIILFGES MALIRLASVALIVAGLIGLKVSA
Specific function: Quaternary ammonium compound efflux pump. Confers resistance to cetylpyridinium, cetyldimethylethyl ammonium and cetrimide cations [H]
COG id: COG2076
COG function: function code P; Membrane transporters of cations and cationic drugs
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the small multidrug resistance (SMR) protein family. SugE (TC 2.A.7.1.4) subfamily [H]
Homologues:
Organism=Escherichia coli, GI87082378, Length=103, Percent_Identity=67.9611650485437, Blast_Score=132, Evalue=4e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000390 [H]
Pfam domain/function: PF00893 Multi_Drug_Res [H]
EC number: NA
Molecular weight: Translated: 10695; Mature: 10564
Theoretical pI: Translated: 9.10; Mature: 9.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSWIILFFAGLFEVGWAVGLKYTDGFTRPLPTVLTVAAMAVSLGLLGLAMKELPLGTAYA CHHHHHHHHHHHHHHHHHCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH IWTGVGAVGTVIAGIILFGESMALIRLASVALIVAGLIGLKVSA HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SWIILFFAGLFEVGWAVGLKYTDGFTRPLPTVLTVAAMAVSLGLLGLAMKELPLGTAYA HHHHHHHHHHHHHHHHHCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH IWTGVGAVGTVIAGIILFGESMALIRLASVALIVAGLIGLKVSA HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 3308458 [H]