Click here to switch to the map view.

The map label for this gene is yhhW [C]

Identifier: 77457854

GI number: 77457854

Start: 1818083

End: 1818973

Strand: Reverse

Name: yhhW [C]

Synonym: Pfl01_1627

Alternate gene names: 77457854

Gene position: 1818973-1818083 (Counterclockwise)

Preceding gene: 77457855

Following gene: 77457849

Centisome position: 28.25

GC content: 62.74

Gene sequence:

>891_bases
ATGGACACCCAACCCCTGATCATCCGCCCGCGCGCCGAAGACGTCGAAGGCCAGCCGATTCTGCGCCCGCTGCCGTCAGC
CAAATGCCGCAGCGTCGGACCTTTCGTGTTTTTCGACCACATGCTCGAAACGGTTTATCCGGCGGGCAAAGGCATGAACA
TCCGACAGCATCCGCACATCGGTCTGTCGACCCTTACGTATTTGTTCGACGGGCAGATCCAGCACAAGGACAGCCTGGGT
TCGGATCAGGTGGTCAGCGCCGGCGATGTCAGCTGGATGACTGCCGGCACGGCGATCGCTCACGTCGAGCGCACGCCCGA
ACCGCTGTGGGAACAATGCTTCAAGATGCACGGCCTGCAAATCTGGCTCGCCTCGCCCAGGGATCACGAACAAGGCCCGG
GGCATTACAGCCACCACCCGGCCTCGACCTTGCCGGTCAGCGATAACCTCGGTGTACAGATCCGCATGATCGCCGGGTCA
GGCTTTTGCCTGGAATCGCCGGTGCCGGTGCTTTCTCCTACGCTGTATGCCGAATTGAAGATGCAAACCGCGACCACACT
GCTGATCCCGACCGAGCATGAAGAGCGGGCGCTGTACGTGTTGAGTGGTGATGTGCAATTGAATGGCGAAGCGGTCGAAC
CCCATGCGCTGGTAGTGTTGCCGGCCGGGGAAGAGATGAGCCTGTTCGCCGAAAGCGACAGCCACGCGGTGTTGTTCGGT
GGTGCGCCACTGGACGGGCCACGGCGGATCAACTGGAACTTTGTCGCGAGCGATCCGGCGGCGATCGATGAGGCGCGGCG
CAAGTGGGCGGCCGGGGACTGGCCGACGGTGCCGGGGGAAGTCGAGCGGATCGAACTGCCTAAATCGCGCAGCGAGCCGA
CGCCGCTGTAA

Upstream 100 bases:

>100_bases
ATCGAAACCCACGCACCCGTCGGCTTCGACAGCCAGTAATCACCCCGACGACACCGGCGGGTTATGCTCCACGCATCACC
CGCTCAGCCTGGAATGGACC

Downstream 100 bases:

>100_bases
AGCAACACTCCCACGCCAGGCGTGGGAGTGTGTCAGCCGATTCAGCCCTTGAACACTTCTTCCAGCAAATCATGCATCGA
CTTGAACGCACGCGCTGCGG

Product: pirin-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 296; Mature: 296

Protein sequence:

>296_residues
MDTQPLIIRPRAEDVEGQPILRPLPSAKCRSVGPFVFFDHMLETVYPAGKGMNIRQHPHIGLSTLTYLFDGQIQHKDSLG
SDQVVSAGDVSWMTAGTAIAHVERTPEPLWEQCFKMHGLQIWLASPRDHEQGPGHYSHHPASTLPVSDNLGVQIRMIAGS
GFCLESPVPVLSPTLYAELKMQTATTLLIPTEHEERALYVLSGDVQLNGEAVEPHALVVLPAGEEMSLFAESDSHAVLFG
GAPLDGPRRINWNFVASDPAAIDEARRKWAAGDWPTVPGEVERIELPKSRSEPTPL

Sequences:

>Translated_296_residues
MDTQPLIIRPRAEDVEGQPILRPLPSAKCRSVGPFVFFDHMLETVYPAGKGMNIRQHPHIGLSTLTYLFDGQIQHKDSLG
SDQVVSAGDVSWMTAGTAIAHVERTPEPLWEQCFKMHGLQIWLASPRDHEQGPGHYSHHPASTLPVSDNLGVQIRMIAGS
GFCLESPVPVLSPTLYAELKMQTATTLLIPTEHEERALYVLSGDVQLNGEAVEPHALVVLPAGEEMSLFAESDSHAVLFG
GAPLDGPRRINWNFVASDPAAIDEARRKWAAGDWPTVPGEVERIELPKSRSEPTPL
>Mature_296_residues
MDTQPLIIRPRAEDVEGQPILRPLPSAKCRSVGPFVFFDHMLETVYPAGKGMNIRQHPHIGLSTLTYLFDGQIQHKDSLG
SDQVVSAGDVSWMTAGTAIAHVERTPEPLWEQCFKMHGLQIWLASPRDHEQGPGHYSHHPASTLPVSDNLGVQIRMIAGS
GFCLESPVPVLSPTLYAELKMQTATTLLIPTEHEERALYVLSGDVQLNGEAVEPHALVVLPAGEEMSLFAESDSHAVLFG
GAPLDGPRRINWNFVASDPAAIDEARRKWAAGDWPTVPGEVERIELPKSRSEPTPL

Specific function: Unknown

COG id: COG1741

COG function: function code R; Pirin-related protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pirin family [H]

Homologues:

Organism=Homo sapiens, GI66363697, Length=271, Percent_Identity=28.0442804428044, Blast_Score=98, Evalue=7e-21,
Organism=Homo sapiens, GI4505823, Length=271, Percent_Identity=28.0442804428044, Blast_Score=98, Evalue=7e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011051
- InterPro:   IPR012093
- InterPro:   IPR008778
- InterPro:   IPR003829
- InterPro:   IPR014710 [H]

Pfam domain/function: PF02678 Pirin; PF05726 Pirin_C [H]

EC number: NA

Molecular weight: Translated: 32434; Mature: 32434

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTQPLIIRPRAEDVEGQPILRPLPSAKCRSVGPFVFFDHMLETVYPAGKGMNIRQHPHI
CCCCCEEEECCCCCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC
GLSTLTYLFDGQIQHKDSLGSDQVVSAGDVSWMTAGTAIAHVERTPEPLWEQCFKMHGLQ
CHHHHHHHHCCEEEECCCCCCCCEEECCCCEEEECCEEEEEECCCCCHHHHHHHHHCCEE
IWLASPRDHEQGPGHYSHHPASTLPVSDNLGVQIRMIAGSGFCLESPVPVLSPTLYAELK
EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEECCCCCCCCCCEEEEEE
MQTATTLLIPTEHEERALYVLSGDVQLNGEAVEPHALVVLPAGEEMSLFAESDSHAVLFG
EEEEEEEEEECCCCCCEEEEEECCEEECCCEECCEEEEEEECCCCEEEEECCCCCEEEEC
GAPLDGPRRINWNFVASDPAAIDEARRKWAAGDWPTVPGEVERIELPKSRSEPTPL
CCCCCCCEEEEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCC
>Mature Secondary Structure
MDTQPLIIRPRAEDVEGQPILRPLPSAKCRSVGPFVFFDHMLETVYPAGKGMNIRQHPHI
CCCCCEEEECCCCCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC
GLSTLTYLFDGQIQHKDSLGSDQVVSAGDVSWMTAGTAIAHVERTPEPLWEQCFKMHGLQ
CHHHHHHHHCCEEEECCCCCCCCEEECCCCEEEECCEEEEEECCCCCHHHHHHHHHCCEE
IWLASPRDHEQGPGHYSHHPASTLPVSDNLGVQIRMIAGSGFCLESPVPVLSPTLYAELK
EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEECCCCCCCCCCEEEEEE
MQTATTLLIPTEHEERALYVLSGDVQLNGEAVEPHALVVLPAGEEMSLFAESDSHAVLFG
EEEEEEEEEECCCCCCEEEEEECCEEECCCEECCEEEEEEECCCCEEEEECCCCCEEEEC
GAPLDGPRRINWNFVASDPAAIDEARRKWAAGDWPTVPGEVERIELPKSRSEPTPL
CCCCCCCEEEEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11259647 [H]