| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77457849
Identifier: 77457849
GI number: 77457849
Start: 1813938
End: 1814174
Strand: Reverse
Name: 77457849
Synonym: Pfl01_1622
Alternate gene names: NA
Gene position: 1814174-1813938 (Counterclockwise)
Preceding gene: 77457854
Following gene: 77457836
Centisome position: 28.18
GC content: 49.37
Gene sequence:
>237_bases ATGCGTAAGACTTTAGCTATTGCCTTGATGTTGACCGCTTCCCTCGGTCTCGCTGCCTGCGATAAAAAATCCGAGGACAA AGCTCAAGATGCCAACCAACATGCTGAACAAGCTCAGCAGAAAATGAACGAAGCTCAGGATAAAGTGAACGACGCGGCGA AAGAAAATGCCGAAGCCGCCAAAGATCAGGCCGAATCGAACGCTGCAGCGCAAGAAGAAGCTGCCAAGAAGCAATAA
Upstream 100 bases:
>100_bases ATTGCAAAACAAACTTATATATCTGAAACAAATGAGGAACTTAACCCTTGGGCGCGAGTTCTTAAGGCCAGTAGTTATTT TCCATAAGGAGAAACACCCC
Downstream 100 bases:
>100_bases GCCGCTTCTCGCTGGCCAAAAAGAAAACCCGCCAAGTACGGGTTTTCTTTTGCCTGTGATTTTTTGCCCATGCCGGCTTA GAGCAAGACGGTTCTAAAAG
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 78; Mature: 78
Protein sequence:
>78_residues MRKTLAIALMLTASLGLAACDKKSEDKAQDANQHAEQAQQKMNEAQDKVNDAAKENAEAAKDQAESNAAAQEEAAKKQ
Sequences:
>Translated_78_residues MRKTLAIALMLTASLGLAACDKKSEDKAQDANQHAEQAQQKMNEAQDKVNDAAKENAEAAKDQAESNAAAQEEAAKKQ >Mature_78_residues MRKTLAIALMLTASLGLAACDKKSEDKAQDANQHAEQAQQKMNEAQDKVNDAAKENAEAAKDQAESNAAAQEEAAKKQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8328; Mature: 8328
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKTLAIALMLTASLGLAACDKKSEDKAQDANQHAEQAQQKMNEAQDKVNDAAKENAEAA CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KDQAESNAAAQEEAAKKQ HHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRKTLAIALMLTASLGLAACDKKSEDKAQDANQHAEQAQQKMNEAQDKVNDAAKENAEAA CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KDQAESNAAAQEEAAKKQ HHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA