| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77457813
Identifier: 77457813
GI number: 77457813
Start: 1773859
End: 1774266
Strand: Direct
Name: 77457813
Synonym: Pfl01_1586
Alternate gene names: NA
Gene position: 1773859-1774266 (Clockwise)
Preceding gene: 77457812
Following gene: 77457814
Centisome position: 27.55
GC content: 66.67
Gene sequence:
>408_bases ATGAACGTCATCGCCCGAATCACAGTCCTCACACTGGCCCTGGGCTTGAGCGCATGTGCGGTGCAACGACCGGAGCCTAC CACCAGGCTGCCGCCGATCCCGCCGTCACAACCCGGCCCGACCCCGTCAACCACCCCGACGCCGAGCAAACCGGGCATTC CGGCCAAACCCGCCAAACCCGTCCCGCGCACCTCCGCCAGCTTCGCCCCGCCCCCGGGCGGCAACAGCCACTGGGACCAG AAACTGGGCGTGTACGTACTCGACGACCAGACCAACACCTTCTACCGCCAGCGCACCTACTACCGCTGGAACAACGGCTG GAGCCGCTCGATCAGCCCCAACGGCCCGTGGGAAGAAACCAACATCCACGGCGTACCGGCGGGACTGGGCAAGCAGTTCG GGGAGTAA
Upstream 100 bases:
>100_bases GTCGGTCGCAGCGGGCCTCTGCCCAGCAGCACCACCGCGCCGCAGACACTGACCATCGACAGCCCGGACAAATAGCCGGA ACCAACAGGAAAGCACCGCC
Downstream 100 bases:
>100_bases AAAAACGGCGATCCTTGGATCGCCGTTTTGCTGTCTGGGGTAATGAGCAATACCTCACTCGTATCCTGTCCTCAACGCCT GAGCTTGCTCTGCAAGAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 135; Mature: 135
Protein sequence:
>135_residues MNVIARITVLTLALGLSACAVQRPEPTTRLPPIPPSQPGPTPSTTPTPSKPGIPAKPAKPVPRTSASFAPPPGGNSHWDQ KLGVYVLDDQTNTFYRQRTYYRWNNGWSRSISPNGPWEETNIHGVPAGLGKQFGE
Sequences:
>Translated_135_residues MNVIARITVLTLALGLSACAVQRPEPTTRLPPIPPSQPGPTPSTTPTPSKPGIPAKPAKPVPRTSASFAPPPGGNSHWDQ KLGVYVLDDQTNTFYRQRTYYRWNNGWSRSISPNGPWEETNIHGVPAGLGKQFGE >Mature_135_residues MNVIARITVLTLALGLSACAVQRPEPTTRLPPIPPSQPGPTPSTTPTPSKPGIPAKPAKPVPRTSASFAPPPGGNSHWDQ KLGVYVLDDQTNTFYRQRTYYRWNNGWSRSISPNGPWEETNIHGVPAGLGKQFGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14610; Mature: 14610
Theoretical pI: Translated: 10.37; Mature: 10.37
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVIARITVLTLALGLSACAVQRPEPTTRLPPIPPSQPGPTPSTTPTPSKPGIPAKPAKP CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC VPRTSASFAPPPGGNSHWDQKLGVYVLDDQTNTFYRQRTYYRWNNGWSRSISPNGPWEET CCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEECCEEEEECCCCCCCCCCCCCCCCC NIHGVPAGLGKQFGE CCCCCCCHHHHCCCC >Mature Secondary Structure MNVIARITVLTLALGLSACAVQRPEPTTRLPPIPPSQPGPTPSTTPTPSKPGIPAKPAKP CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC VPRTSASFAPPPGGNSHWDQKLGVYVLDDQTNTFYRQRTYYRWNNGWSRSISPNGPWEET CCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEECCEEEEECCCCCCCCCCCCCCCCC NIHGVPAGLGKQFGE CCCCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA