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The map label for this gene is ccmF [H]

Identifier: 77457809

GI number: 77457809

Start: 1769646

End: 1771634

Strand: Direct

Name: ccmF [H]

Synonym: Pfl01_1582

Alternate gene names: 77457809

Gene position: 1769646-1771634 (Clockwise)

Preceding gene: 77457808

Following gene: 77457810

Centisome position: 27.49

GC content: 63.05

Gene sequence:

>1989_bases
ATGACATCCAGCATTTTCATTCCTGAGTTGGGCCATCTGGCCATGATCCTGGCGCTGTGTTTCGCGCTGGTGCAGGCGGT
GGTGCCGTTGCTCGGTGCCTGGCGCGGTGATCGTCTGTGGATGGGCCTCGCTCAACCGGCGGCGTGGGGGCAGTTCGCGT
TCCTGCTGTTCGCCTTCGGTTGCCTGACCTACGCCTTCATGACCGACGATTTCTCCGTGGCCTACGTCGCGATGAACTCC
AACAGCGCGCTGCCGTGGTACTACAAGTTCAGCGCGGTGTGGGGCGCCCACGAAGGGTCGCTGCTGCTGTGGGCGCTGAT
CCTCGGCGGCTGGACCTTCGCGGTGTCGGTGTTCTCGCGGCAGTTGCCGCAAGTCATGCTCGCTCGCGTGCTGGCGGTGA
TGGGCATGATCAGCACCGGTTTTCTGCTGTTCCTGATCCTCACCTCGAACCCGTTTTCGCGGATCCTGCCGCAGATCCCG
GCCGACGGTCGTGACCTCAATCCGCTGCTGCAGGACATCGGCCTGATCGTTCATCCGCCGATGCTGTACATGGGCTATGT
CGGTTTCTCGGTGGCCTTCGCGTTTGCCATTGCCGCATTGCTGGGCGGTCGTCTCGATGCGGCGTGGGCACGCTGGTCGC
GTCCGTGGACCATCGTCGCCTGGGCCTTCCTCGGCATCGGCATCACCCTCGGTTCATGGTGGGCTTACTACGAACTCGGC
TGGGGCGGCTGGTGGTTCTGGGACCCGGTGGAAAACGCATCGTTCATGCCATGGCTGGTGGGCACGGCGCTGATTCACTC
GCTGGCGGTCACCGAGAAACGTGGCGTGTTCAAGAGCTGGACGGTGTTGCTGGCGATTGCCGCATTCTCCCTGAGCCTGC
TCGGTACGTTCCTCGTACGTTCCGGCGTGCTGACCTCGGTGCACGCGTTTGCCTCCGATCCTGAGCGCGGCGTGTTCATC
CTGATCTTCCTGCTGTTCGTGGTCGGTGGTTCGCTGACACTGTTTGCGCTGCGCGCGCCGGTGGTCAAGAGCCAGGTCGG
TTTCAATCTGTGGTCGCGGGAAACCCTGCTGCTGGGTAACAACCTGGTGCTGGTGGTGGCGGCGTCGATGATCCTGCTCG
GCACGCTGTACCCGCTGATTCTCGATGCGATCAGCGGCGCCAAGCTGTCGGTCGGCCCGCCGTACTTCAACGCGCTGTTC
ATTCCGTTGATGGCGCTGTTGATGCTGGTGATGGCGGTCGGCGTGATCGTGCGCTGGAAGGACACCCCGGTGAAATGGCT
GGTCAGTATGCTGACTCCGGTGCTGCTGGGCAGCGTCGCGCTGGCGGTGGTGGCCGGTGTCGCTTATGGTGATTTCAACT
GGGCGGTGATCGCGACGTTCCTGCTTGCGGCCTGGGTGTTGCTGGCCGGTGTGCGCGACATCTTCGACAAGACTCGTCAC
AAAGGCCTGATCAAAGGCCTGCCGACCCTGACCCGCAGCTACTGGGGCATGCAGATCGCCCACCTCGGGATCGCCGTCTG
CGCGCTGGGCGTGGTGTTGTCGAGCCAGAACAGTGCCGAACGTGACCTGCGTCTGGCACCGGGCGAATCAATGGACCTGG
CCGGTTATCAGTTCGTGTTTGAAGGCGCCAAGCACTTCGAAGGCCCGAACTTCACTTCCGACAAGGGCACCGTCCGGGTG
ATCCGCAACGGTCAGGAAGTCAGCGTGCTGCACCCGGAAAAACGCCTGTACACCGTGCAGAACTCGGTGATGACCGAAGC
CGGGATCGACGCCGGTTTCACCCGTGACCTCTACGTCGCTTTGGGTGAACCGCTGGGCGATGGCGCCTGGGCAGTGCGGG
TCCACGTCAAACCGTTCGTGCGCTGGATCTGGTTCGGCGGCCTGCTGACCGGTTTCGGTGGTTTGCTGGCGGCGCTGGAT
CGGCGTTATCGAGTGAAGGTCAAAGCCAAAGTGCGTGAAGCGCTGGGCATGGAAGGAGCCGCTGCATGA

Upstream 100 bases:

>100_bases
GCTGGCCAAGCACGACGAGAAATACATGCCGCCGGAAGTGACCAAAGCCCTGAAGGACAGCGGTCAATCCGCGCCAACCC
CTGCGAAGGAGGGTTGATCG

Downstream 100 bases:

>100_bases
GACGTTGGTTGATGCTGGTGCCATTGGCGATTTTCCTGCTGGTGGCCGTATTCCTTTATCGCGGTCTGTACCTGGATCCG
GCGGAGCTGCCGTCGGCGAT

Product: cytochrome c-type biogenesis protein CcmF

Products: NA

Alternate protein names: Cytochrome c-type biogenesis protein CycK [H]

Number of amino acids: Translated: 662; Mature: 661

Protein sequence:

>662_residues
MTSSIFIPELGHLAMILALCFALVQAVVPLLGAWRGDRLWMGLAQPAAWGQFAFLLFAFGCLTYAFMTDDFSVAYVAMNS
NSALPWYYKFSAVWGAHEGSLLLWALILGGWTFAVSVFSRQLPQVMLARVLAVMGMISTGFLLFLILTSNPFSRILPQIP
ADGRDLNPLLQDIGLIVHPPMLYMGYVGFSVAFAFAIAALLGGRLDAAWARWSRPWTIVAWAFLGIGITLGSWWAYYELG
WGGWWFWDPVENASFMPWLVGTALIHSLAVTEKRGVFKSWTVLLAIAAFSLSLLGTFLVRSGVLTSVHAFASDPERGVFI
LIFLLFVVGGSLTLFALRAPVVKSQVGFNLWSRETLLLGNNLVLVVAASMILLGTLYPLILDAISGAKLSVGPPYFNALF
IPLMALLMLVMAVGVIVRWKDTPVKWLVSMLTPVLLGSVALAVVAGVAYGDFNWAVIATFLLAAWVLLAGVRDIFDKTRH
KGLIKGLPTLTRSYWGMQIAHLGIAVCALGVVLSSQNSAERDLRLAPGESMDLAGYQFVFEGAKHFEGPNFTSDKGTVRV
IRNGQEVSVLHPEKRLYTVQNSVMTEAGIDAGFTRDLYVALGEPLGDGAWAVRVHVKPFVRWIWFGGLLTGFGGLLAALD
RRYRVKVKAKVREALGMEGAAA

Sequences:

>Translated_662_residues
MTSSIFIPELGHLAMILALCFALVQAVVPLLGAWRGDRLWMGLAQPAAWGQFAFLLFAFGCLTYAFMTDDFSVAYVAMNS
NSALPWYYKFSAVWGAHEGSLLLWALILGGWTFAVSVFSRQLPQVMLARVLAVMGMISTGFLLFLILTSNPFSRILPQIP
ADGRDLNPLLQDIGLIVHPPMLYMGYVGFSVAFAFAIAALLGGRLDAAWARWSRPWTIVAWAFLGIGITLGSWWAYYELG
WGGWWFWDPVENASFMPWLVGTALIHSLAVTEKRGVFKSWTVLLAIAAFSLSLLGTFLVRSGVLTSVHAFASDPERGVFI
LIFLLFVVGGSLTLFALRAPVVKSQVGFNLWSRETLLLGNNLVLVVAASMILLGTLYPLILDAISGAKLSVGPPYFNALF
IPLMALLMLVMAVGVIVRWKDTPVKWLVSMLTPVLLGSVALAVVAGVAYGDFNWAVIATFLLAAWVLLAGVRDIFDKTRH
KGLIKGLPTLTRSYWGMQIAHLGIAVCALGVVLSSQNSAERDLRLAPGESMDLAGYQFVFEGAKHFEGPNFTSDKGTVRV
IRNGQEVSVLHPEKRLYTVQNSVMTEAGIDAGFTRDLYVALGEPLGDGAWAVRVHVKPFVRWIWFGGLLTGFGGLLAALD
RRYRVKVKAKVREALGMEGAAA
>Mature_661_residues
TSSIFIPELGHLAMILALCFALVQAVVPLLGAWRGDRLWMGLAQPAAWGQFAFLLFAFGCLTYAFMTDDFSVAYVAMNSN
SALPWYYKFSAVWGAHEGSLLLWALILGGWTFAVSVFSRQLPQVMLARVLAVMGMISTGFLLFLILTSNPFSRILPQIPA
DGRDLNPLLQDIGLIVHPPMLYMGYVGFSVAFAFAIAALLGGRLDAAWARWSRPWTIVAWAFLGIGITLGSWWAYYELGW
GGWWFWDPVENASFMPWLVGTALIHSLAVTEKRGVFKSWTVLLAIAAFSLSLLGTFLVRSGVLTSVHAFASDPERGVFIL
IFLLFVVGGSLTLFALRAPVVKSQVGFNLWSRETLLLGNNLVLVVAASMILLGTLYPLILDAISGAKLSVGPPYFNALFI
PLMALLMLVMAVGVIVRWKDTPVKWLVSMLTPVLLGSVALAVVAGVAYGDFNWAVIATFLLAAWVLLAGVRDIFDKTRHK
GLIKGLPTLTRSYWGMQIAHLGIAVCALGVVLSSQNSAERDLRLAPGESMDLAGYQFVFEGAKHFEGPNFTSDKGTVRVI
RNGQEVSVLHPEKRLYTVQNSVMTEAGIDAGFTRDLYVALGEPLGDGAWAVRVHVKPFVRWIWFGGLLTGFGGLLAALDR
RYRVKVKAKVREALGMEGAAA

Specific function: Required for the biogenesis of c-type cytochromes. Possible subunit of a heme lyase [H]

COG id: COG1138

COG function: function code O; Cytochrome c biogenesis factor

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ccmF/cycK/ccl1/nrfE/ccsA family [H]

Homologues:

Organism=Escherichia coli, GI1788524, Length=649, Percent_Identity=54.6995377503852, Blast_Score=659, Evalue=0.0,
Organism=Escherichia coli, GI1790511, Length=371, Percent_Identity=48.7870619946092, Blast_Score=293, Evalue=3e-80,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002541
- InterPro:   IPR003567
- InterPro:   IPR003568 [H]

Pfam domain/function: PF01578 Cytochrom_C_asm [H]

EC number: NA

Molecular weight: Translated: 72294; Mature: 72163

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSSIFIPELGHLAMILALCFALVQAVVPLLGAWRGDRLWMGLAQPAAWGQFAFLLFAFG
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHH
CLTYAFMTDDFSVAYVAMNSNSALPWYYKFSAVWGAHEGSLLLWALILGGWTFAVSVFSR
HHHHHHCCCCCEEEEEEECCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
QLPQVMLARVLAVMGMISTGFLLFLILTSNPFSRILPQIPADGRDLNPLLQDIGLIVHPP
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCHHHHHCCHHCCCH
MLYMGYVGFSVAFAFAIAALLGGRLDAAWARWSRPWTIVAWAFLGIGITLGSWWAYYELG
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCEEEEEEEC
WGGWWFWDPVENASFMPWLVGTALIHSLAVTEKRGVFKSWTVLLAIAAFSLSLLGTFLVR
CCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
SGVLTSVHAFASDPERGVFILIFLLFVVGGSLTLFALRAPVVKSQVGFNLWSRETLLLGN
HHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEHHHHHHHHHHHHCCCCCCCCEEEECC
NLVLVVAASMILLGTLYPLILDAISGAKLSVGPPYFNALFIPLMALLMLVMAVGVIVRWK
CHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHCEEEEEC
DTPVKWLVSMLTPVLLGSVALAVVAGVAYGDFNWAVIATFLLAAWVLLAGVRDIFDKTRH
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KGLIKGLPTLTRSYWGMQIAHLGIAVCALGVVLSSQNSAERDLRLAPGESMDLAGYQFVF
CHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCHHHHHH
EGAKHFEGPNFTSDKGTVRVIRNGQEVSVLHPEKRLYTVQNSVMTEAGIDAGFTRDLYVA
HHHHHCCCCCCCCCCCCEEEEECCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCHHHHE
LGEPLGDGAWAVRVHVKPFVRWIWFGGLLTGFGGLLAALDRRYRVKVKAKVREALGMEGA
ECCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEHHHHHHHHHCCCCC
AA
CC
>Mature Secondary Structure 
TSSIFIPELGHLAMILALCFALVQAVVPLLGAWRGDRLWMGLAQPAAWGQFAFLLFAFG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHH
CLTYAFMTDDFSVAYVAMNSNSALPWYYKFSAVWGAHEGSLLLWALILGGWTFAVSVFSR
HHHHHHCCCCCEEEEEEECCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
QLPQVMLARVLAVMGMISTGFLLFLILTSNPFSRILPQIPADGRDLNPLLQDIGLIVHPP
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCHHHHHCCHHCCCH
MLYMGYVGFSVAFAFAIAALLGGRLDAAWARWSRPWTIVAWAFLGIGITLGSWWAYYELG
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCEEEEEEEC
WGGWWFWDPVENASFMPWLVGTALIHSLAVTEKRGVFKSWTVLLAIAAFSLSLLGTFLVR
CCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
SGVLTSVHAFASDPERGVFILIFLLFVVGGSLTLFALRAPVVKSQVGFNLWSRETLLLGN
HHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEHHHHHHHHHHHHCCCCCCCCEEEECC
NLVLVVAASMILLGTLYPLILDAISGAKLSVGPPYFNALFIPLMALLMLVMAVGVIVRWK
CHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHCEEEEEC
DTPVKWLVSMLTPVLLGSVALAVVAGVAYGDFNWAVIATFLLAAWVLLAGVRDIFDKTRH
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KGLIKGLPTLTRSYWGMQIAHLGIAVCALGVVLSSQNSAERDLRLAPGESMDLAGYQFVF
CHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCHHHHHH
EGAKHFEGPNFTSDKGTVRVIRNGQEVSVLHPEKRLYTVQNSVMTEAGIDAGFTRDLYVA
HHHHHCCCCCCCCCCCCEEEEECCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCHHHHE
LGEPLGDGAWAVRVHVKPFVRWIWFGGLLTGFGGLLAALDRRYRVKVKAKVREALGMEGA
ECCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEHHHHHHHHHCCCCC
AA
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA