| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is ylxH [H]
Identifier: 77457789
GI number: 77457789
Start: 1752319
End: 1753149
Strand: Direct
Name: ylxH [H]
Synonym: Pfl01_1562
Alternate gene names: 77457789
Gene position: 1752319-1753149 (Clockwise)
Preceding gene: 77457788
Following gene: 77457790
Centisome position: 27.22
GC content: 63.78
Gene sequence:
>831_bases ATGGGCAGCATGCATCCCGTACAGGTGATCGCGGTGACCGGCGGCAAAGGTGGCGTCGGCAAGACTAATGTGTCAGTGAA CTTGTCCCTGGCCCTGGCAGAGCTTGGCCGTCGGGTCATGCTGCTGGACGCCGACCTGGGGCTGGCGAACGTCGACGTTC TGCTGGGCCTCACACCCAAACGAACCCTGGCCGACGTGATCGAAGGCCGCTGCGAGCTGCGCGACGTGCTGTTGCAGGGC CCCGGCGGGATCCGCATCGTGCCGGCCGCTTCCGGCACCCAGAGCATGGTTCACCTGAGCCCGGCCCAGCATGCCGGCCT GATTCAGGCCTTCAGCGACATCGGCGACAATCTCGACGTGCTGGTGATCGACACCGCTGCGGGTATTGGTGACTCGGTAG TCAGTTTTGTTCGCGCAGCGCAAGAAGTGTTGCTGGTGGTCTGCGACGAGCCGACCTCGATCACCGACGCCTACGCGCTG ATCAAGCTGCTCAACCGCGATTACGGCATGAACCGCTTCCGCGTCCTGGCCAACATGGCCCAGAGCCCGCAGGAAGGTCG CAATCTGTTCGCCAAGTTGACCAAGGTCACGGATCGCTTCCTCGACGTCGCCCTACAATACGTCGGCGCGGTGCCCTACG ACGAAAGCGTGCGCAAGGCGGTGCAGAAGCAGCGTGCGGTCTATGAAGCCTTCCCGCGTTCCAAGTGCGCACTGGCGTTC AAGGCGATCGCACAGAAGGTCGACACCTGGCCGCTGCCCGCCAACCCGCGCGGCCACCTCGAATTTTTCGTCGAGCGCCT CGTGCAGCAAACGGCAGGACCTGTGCTATGA
Upstream 100 bases:
>100_bases TTTCGTACCTACATCGATGGCCTGCCACGCATTGTTCCGGTTGTGAACGCGCAGCCAGTAATGTGGCCTCCGTCTATGCA AGACAAGGTAAAGAAATAAC
Downstream 100 bases:
>100_bases CCGCCAGCGGTATGAATTTCTACAAGAAGTCGGCGCGTGACGCGCAGTACGAGCTGATCGAGCGTTACGCGCCACTGGTC AAACGCATCGCCTACCACTT
Product: cobyrinic acid a,c-diamide synthase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 276; Mature: 275
Protein sequence:
>276_residues MGSMHPVQVIAVTGGKGGVGKTNVSVNLSLALAELGRRVMLLDADLGLANVDVLLGLTPKRTLADVIEGRCELRDVLLQG PGGIRIVPAASGTQSMVHLSPAQHAGLIQAFSDIGDNLDVLVIDTAAGIGDSVVSFVRAAQEVLLVVCDEPTSITDAYAL IKLLNRDYGMNRFRVLANMAQSPQEGRNLFAKLTKVTDRFLDVALQYVGAVPYDESVRKAVQKQRAVYEAFPRSKCALAF KAIAQKVDTWPLPANPRGHLEFFVERLVQQTAGPVL
Sequences:
>Translated_276_residues MGSMHPVQVIAVTGGKGGVGKTNVSVNLSLALAELGRRVMLLDADLGLANVDVLLGLTPKRTLADVIEGRCELRDVLLQG PGGIRIVPAASGTQSMVHLSPAQHAGLIQAFSDIGDNLDVLVIDTAAGIGDSVVSFVRAAQEVLLVVCDEPTSITDAYAL IKLLNRDYGMNRFRVLANMAQSPQEGRNLFAKLTKVTDRFLDVALQYVGAVPYDESVRKAVQKQRAVYEAFPRSKCALAF KAIAQKVDTWPLPANPRGHLEFFVERLVQQTAGPVL >Mature_275_residues GSMHPVQVIAVTGGKGGVGKTNVSVNLSLALAELGRRVMLLDADLGLANVDVLLGLTPKRTLADVIEGRCELRDVLLQGP GGIRIVPAASGTQSMVHLSPAQHAGLIQAFSDIGDNLDVLVIDTAAGIGDSVVSFVRAAQEVLLVVCDEPTSITDAYALI KLLNRDYGMNRFRVLANMAQSPQEGRNLFAKLTKVTDRFLDVALQYVGAVPYDESVRKAVQKQRAVYEAFPRSKCALAFK AIAQKVDTWPLPANPRGHLEFFVERLVQQTAGPVL
Specific function: ATPase Required For The Correct Placement Of The Division Site. Cell Division Inhibitors Minc And Mind Act In Concert To Form An Inhibitor Capable Of Blocking Formation Of The Polar Z Ring Septums. Rapidly Oscillates Between The Poles Of The Cell To Dest
COG id: COG0455
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Inner Membrane-Associated [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI6912540, Length=257, Percent_Identity=26.4591439688716, Blast_Score=68, Evalue=1e-11, Organism=Escherichia coli, GI1787423, Length=228, Percent_Identity=26.7543859649123, Blast_Score=66, Evalue=3e-12, Organism=Drosophila melanogaster, GI24667611, Length=266, Percent_Identity=26.6917293233083, Blast_Score=67, Evalue=1e-11,
Paralogues:
None
Copy number: 300 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002586 [H]
Pfam domain/function: PF01656 CbiA [H]
EC number: NA
Molecular weight: Translated: 29611; Mature: 29480
Theoretical pI: Translated: 8.07; Mature: 8.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSMHPVQVIAVTGGKGGVGKTNVSVNLSLALAELGRRVMLLDADLGLANVDVLLGLTPK CCCCCCEEEEEEECCCCCCCCCEEEEEEEEEHHHHCCEEEEEECCCCCCCCCEEEECCCH RTLADVIEGRCELRDVLLQGPGGIRIVPAASGTQSMVHLSPAQHAGLIQAFSDIGDNLDV HHHHHHHHCHHHHHHHHHCCCCCEEEEECCCCCCCEEEECCHHHHHHHHHHHHCCCCCEE LVIDTAAGIGDSVVSFVRAAQEVLLVVCDEPTSITDAYALIKLLNRDYGMNRFRVLANMA EEEECCCCCCHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHH QSPQEGRNLFAKLTKVTDRFLDVALQYVGAVPYDESVRKAVQKQRAVYEAFPRSKCALAF CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHH KAIAQKVDTWPLPANPRGHLEFFVERLVQQTAGPVL HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure GSMHPVQVIAVTGGKGGVGKTNVSVNLSLALAELGRRVMLLDADLGLANVDVLLGLTPK CCCCCEEEEEEECCCCCCCCCEEEEEEEEEHHHHCCEEEEEECCCCCCCCCEEEECCCH RTLADVIEGRCELRDVLLQGPGGIRIVPAASGTQSMVHLSPAQHAGLIQAFSDIGDNLDV HHHHHHHHCHHHHHHHHHCCCCCEEEEECCCCCCCEEEECCHHHHHHHHHHHHCCCCCEE LVIDTAAGIGDSVVSFVRAAQEVLLVVCDEPTSITDAYALIKLLNRDYGMNRFRVLANMA EEEECCCCCCHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHH QSPQEGRNLFAKLTKVTDRFLDVALQYVGAVPYDESVRKAVQKQRAVYEAFPRSKCALAF CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHH KAIAQKVDTWPLPANPRGHLEFFVERLVQQTAGPVL HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7987014; 9384377 [H]