Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

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The map label for this gene is trpH [H]

Identifier: 77457714

GI number: 77457714

Start: 1666126

End: 1666989

Strand: Direct

Name: trpH [H]

Synonym: Pfl01_1487

Alternate gene names: 77457714

Gene position: 1666126-1666989 (Clockwise)

Preceding gene: 77457707

Following gene: 77457715

Centisome position: 25.88

GC content: 64.58

Gene sequence:

>864_bases
GTGAATGTCGATTTGCACTGCCACAGCACGGCCTCCGATGGCGCCCTGGCGCCTGCGGCACTGGTTGCGCGTGCGTTCGA
GAACGGCGTGCGAGTCCTGTCCCTGACCGATCATGACACCCTCGAAGGCCTTGCCGAAGCGCGCACGGCCGCCGAGGCGC
TGGGCATGCAACTGGTCAACGGCGTCGAATTGTCCTGCACTTGGGGCGGGGCGACCATTCACGTGCTCGGTTACGGTTTC
GACGTCAACGCCGCGCCGTTGGTCGAGGCGATCGCCAATCTGCACGATGGTCGCTGGCTGCGGTCTGAGGAAATAAGCCG
CAAGCTCGCCCTCAAGGGTATGCCGAATGCCCTCGACGGCGCGCGGCAGATCCAGCAGGAGCTGGGCGACAGCGGCAACG
CGCCGGCCCGCCCGCATTTCGCCGACTGGATGGTGCGTGAAGGTTTTGTAAAGGATCGCGCCGAAGCGTTTCGCAAATGG
CTCGGCGCCGGCAAGCTGGGAGACGTCAAGCAGCACTGGCCGACCCTGGAAGACACCGTCGGCACGCTGCGCGCCGCCGG
CGCATGGGTCAGCCTGGCGCATCCATGGCACTACGATTTCACCCGCAGCAAGCGCCGAAAGCTGATTGCCGACTATATTC
AAGCGGGCGGGCAGGCGATCGAAGTGGTCAATGGTCATCAACCTGCGGAACAGGTGGGCAGCCTGGCAATCCTTGCCCGA
GAGTTCGGTCTGCTGGTCAGCGCCGGCAGTGATTTCCATGGCCCTGGTGGCTGGTCCGAGATCGGCCAGTACCGGCCGGT
GCCGGAGGACCTTCCACCCCTGTGGTGTCGGTTCAAACATGACCCAGTTATTGCCGCCGTCTGA

Upstream 100 bases:

>100_bases
TGAATTGTTTCACAGTGAGAGCCAGAAGCTGGATGTGGCGGCATAATAACAAACATATGGGCGCGCGATAGCGCCAGCTG
ATTTGAGGTTACACATCCCC

Downstream 100 bases:

>100_bases
ACAGGTAGAGAATGTGAGTCAATTTTTCCAGATTCATCCGGAAAACCCGCAAGCGCGCCTGATCAAACAGGCCGTCGAGA
TCATCCGCAAGGGCGGAGTT

Product: PHP-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MNVDLHCHSTASDGALAPAALVARAFENGVRVLSLTDHDTLEGLAEARTAAEALGMQLVNGVELSCTWGGATIHVLGYGF
DVNAAPLVEAIANLHDGRWLRSEEISRKLALKGMPNALDGARQIQQELGDSGNAPARPHFADWMVREGFVKDRAEAFRKW
LGAGKLGDVKQHWPTLEDTVGTLRAAGAWVSLAHPWHYDFTRSKRRKLIADYIQAGGQAIEVVNGHQPAEQVGSLAILAR
EFGLLVSAGSDFHGPGGWSEIGQYRPVPEDLPPLWCRFKHDPVIAAV

Sequences:

>Translated_287_residues
MNVDLHCHSTASDGALAPAALVARAFENGVRVLSLTDHDTLEGLAEARTAAEALGMQLVNGVELSCTWGGATIHVLGYGF
DVNAAPLVEAIANLHDGRWLRSEEISRKLALKGMPNALDGARQIQQELGDSGNAPARPHFADWMVREGFVKDRAEAFRKW
LGAGKLGDVKQHWPTLEDTVGTLRAAGAWVSLAHPWHYDFTRSKRRKLIADYIQAGGQAIEVVNGHQPAEQVGSLAILAR
EFGLLVSAGSDFHGPGGWSEIGQYRPVPEDLPPLWCRFKHDPVIAAV
>Mature_287_residues
MNVDLHCHSTASDGALAPAALVARAFENGVRVLSLTDHDTLEGLAEARTAAEALGMQLVNGVELSCTWGGATIHVLGYGF
DVNAAPLVEAIANLHDGRWLRSEEISRKLALKGMPNALDGARQIQQELGDSGNAPARPHFADWMVREGFVKDRAEAFRKW
LGAGKLGDVKQHWPTLEDTVGTLRAAGAWVSLAHPWHYDFTRSKRRKLIADYIQAGGQAIEVVNGHQPAEQVGSLAILAR
EFGLLVSAGSDFHGPGGWSEIGQYRPVPEDLPPLWCRFKHDPVIAAV

Specific function: Unknown

COG id: COG0613

COG function: function code R; Predicted metal-dependent phosphoesterases (PHP family)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trpH family [H]

Homologues:

Organism=Escherichia coli, GI1787520, Length=274, Percent_Identity=36.4963503649635, Blast_Score=173, Evalue=1e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004013
- InterPro:   IPR003141
- InterPro:   IPR016195 [H]

Pfam domain/function: PF02811 PHP [H]

EC number: NA

Molecular weight: Translated: 31056; Mature: 31056

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVDLHCHSTASDGALAPAALVARAFENGVRVLSLTDHDTLEGLAEARTAAEALGMQLVN
CCCEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHC
GVELSCTWGGATIHVLGYGFDVNAAPLVEAIANLHDGRWLRSEEISRKLALKGMPNALDG
CEEEEEEECCEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHH
ARQIQQELGDSGNAPARPHFADWMVREGFVKDRAEAFRKWLGAGKLGDVKQHWPTLEDTV
HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHH
GTLRAAGAWVSLAHPWHYDFTRSKRRKLIADYIQAGGQAIEVVNGHQPAEQVGSLAILAR
HHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHH
EFGLLVSAGSDFHGPGGWSEIGQYRPVPEDLPPLWCRFKHDPVIAAV
HHHHEEECCCCCCCCCCHHHHHCCCCCCCCCCCHHEEECCCCEEEEC
>Mature Secondary Structure
MNVDLHCHSTASDGALAPAALVARAFENGVRVLSLTDHDTLEGLAEARTAAEALGMQLVN
CCCEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHC
GVELSCTWGGATIHVLGYGFDVNAAPLVEAIANLHDGRWLRSEEISRKLALKGMPNALDG
CEEEEEEECCEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHH
ARQIQQELGDSGNAPARPHFADWMVREGFVKDRAEAFRKWLGAGKLGDVKQHWPTLEDTV
HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHH
GTLRAAGAWVSLAHPWHYDFTRSKRRKLIADYIQAGGQAIEVVNGHQPAEQVGSLAILAR
HHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHH
EFGLLVSAGSDFHGPGGWSEIGQYRPVPEDLPPLWCRFKHDPVIAAV
HHHHEEECCCCCCCCCCHHHHHCCCCCCCCCCCHHEEECCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]