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The map label for this gene is ydjA [H]

Identifier: 77457707

GI number: 77457707

Start: 1661350

End: 1661916

Strand: Direct

Name: ydjA [H]

Synonym: Pfl01_1480

Alternate gene names: 77457707

Gene position: 1661350-1661916 (Clockwise)

Preceding gene: 77457705

Following gene: 77457714

Centisome position: 25.8

GC content: 63.32

Gene sequence:

>567_bases
ATGCAGGCTCTCGACGCTTTGCTCAACCGTGTTTCCGTTCCACGACTGATCGATCCGGCCCCCACCGCCGAACAGCGCGA
AGTGCTGTTCGCCGCCGCGACCCGCGCACCGGATCACGGCCATTTGCAGCCGTATCGCTTCCTGACCGTCGAAGGCGCGG
CGCGTGAGCAGATGGGCGAGTTGCTGGCCGAAGCTGCAAAAATGCAGGAAGGCGAAGTCACCGAAGCGATGATCGACAAG
GCCCGCAACGGCCCGCTGCGGGCGCCGCTGGTGGTCGTGGTCATCGCCAAGTTGCAGGATCACGTCAAATACCCGAAGGC
CGAGCAGTTGCTGGCCGCAGGCTGTGCGGCTCACGGGATTCTGCTGGCGGCTTACGCGCAGGGGATTGGTGCGGTGTGGC
GTACGGGTGATCTGGCGTACTCGAAACATGTCGCCAAGGGTTTGGGCCTGACGGATGACGAAGAGGTGATTGCCTTCCTG
TACCTCGGCACACCGCAGAAAGAACCGCGGGTGGCCGAGAAGGTTGATCTGGCGGAGTTTGTCAGCGCGTGGCCAGCAAA
GGCCTGA

Upstream 100 bases:

>100_bases
GGGAAGGGCGCCATTCTACCTGCGGTGCAAGGCATGTAAACCGACGCGTCTGGATCACTTGCAGCTAGAATAGCCGGACA
TTTTTTTCAGGAGGTGGCCG

Downstream 100 bases:

>100_bases
CACATTGGTTTTATGGTTGGACAACTGCCCCCGGTACGAGAGGCAATTCAAGACTCGCCACAAACCCGCCCTGCGGATGA
TTGGCCAGCACCAGCGTCCC

Product: nitroreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MQALDALLNRVSVPRLIDPAPTAEQREVLFAAATRAPDHGHLQPYRFLTVEGAAREQMGELLAEAAKMQEGEVTEAMIDK
ARNGPLRAPLVVVVIAKLQDHVKYPKAEQLLAAGCAAHGILLAAYAQGIGAVWRTGDLAYSKHVAKGLGLTDDEEVIAFL
YLGTPQKEPRVAEKVDLAEFVSAWPAKA

Sequences:

>Translated_188_residues
MQALDALLNRVSVPRLIDPAPTAEQREVLFAAATRAPDHGHLQPYRFLTVEGAAREQMGELLAEAAKMQEGEVTEAMIDK
ARNGPLRAPLVVVVIAKLQDHVKYPKAEQLLAAGCAAHGILLAAYAQGIGAVWRTGDLAYSKHVAKGLGLTDDEEVIAFL
YLGTPQKEPRVAEKVDLAEFVSAWPAKA
>Mature_188_residues
MQALDALLNRVSVPRLIDPAPTAEQREVLFAAATRAPDHGHLQPYRFLTVEGAAREQMGELLAEAAKMQEGEVTEAMIDK
ARNGPLRAPLVVVVIAKLQDHVKYPKAEQLLAAGCAAHGILLAAYAQGIGAVWRTGDLAYSKHVAKGLGLTDDEEVIAFL
YLGTPQKEPRVAEKVDLAEFVSAWPAKA

Specific function: Unknown

COG id: COG0778

COG function: function code C; Nitroreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nitroreductase family [H]

Homologues:

Organism=Escherichia coli, GI1788063, Length=183, Percent_Identity=43.1693989071038, Blast_Score=154, Evalue=3e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000415 [H]

Pfam domain/function: PF00881 Nitroreductase [H]

EC number: NA

Molecular weight: Translated: 20257; Mature: 20257

Theoretical pI: Translated: 6.02; Mature: 6.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQALDALLNRVSVPRLIDPAPTAEQREVLFAAATRAPDHGHLQPYRFLTVEGAAREQMGE
CHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHHH
LLAEAAKMQEGEVTEAMIDKARNGPLRAPLVVVVIAKLQDHVKYPKAEQLLAAGCAAHGI
HHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LLAAYAQGIGAVWRTGDLAYSKHVAKGLGLTDDEEVIAFLYLGTPQKEPRVAEKVDLAEF
HHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHEEEEEEECCCCCCCHHHHHHHHHHH
VSAWPAKA
HHHCCCCC
>Mature Secondary Structure
MQALDALLNRVSVPRLIDPAPTAEQREVLFAAATRAPDHGHLQPYRFLTVEGAAREQMGE
CHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHHH
LLAEAAKMQEGEVTEAMIDKARNGPLRAPLVVVVIAKLQDHVKYPKAEQLLAAGCAAHGI
HHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LLAAYAQGIGAVWRTGDLAYSKHVAKGLGLTDDEEVIAFLYLGTPQKEPRVAEKVDLAEF
HHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHEEEEEEECCCCCCCHHHHHHHHHHH
VSAWPAKA
HHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]