Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

Click here to switch to the map view.

The map label for this gene is 77457709

Identifier: 77457709

GI number: 77457709

Start: 1663335

End: 1663784

Strand: Reverse

Name: 77457709

Synonym: Pfl01_1482

Alternate gene names: NA

Gene position: 1663784-1663335 (Counterclockwise)

Preceding gene: 77457710

Following gene: 77457708

Centisome position: 25.84

GC content: 60.44

Gene sequence:

>450_bases
ATGCGCAAGACTCTTATCGCTCTGATGTTTGCCGCTGCCCTGCCGACCGTTGCCATGGCCATGCCACAGGATGGCGGCCC
GATGGGTGGCCCGCTGGACGGCCCGCGCCATGGCGGTCAGATGCACGGCATGCACGGCAAAGGCCCGTACAGCCAGCTGG
ACCTGTCCCGCGAACAGCGCGAGCAGATCCGCAAGATCATGGGCGAGCAGATGCACGAGCGTAAGCAGACGGTCGAAAAA
TACCTGGAAAAACTCTCGCCAGCCGACCAGAAAGCCATGAAGGACGAGATGGCGGCCAACCACAAGAAAGCCGAGTCCGA
TGTCCGCGCCGTGTTGAAACCGGATCAACAGAAGAAATTCGACGAGATCCAGAAGAAACAGGCCGAGCGTCGCGCCGAAT
GGGCCGAGTTCAAAGCCTGGAAAGCGCAGCAGCCGCAAAAGGCGCAATAA

Upstream 100 bases:

>100_bases
GTTTACCCAAGCTTTACACAGCGCTGACCGCCGCTGACCTTGATCTCCGTAATCTGTACTCATCCGGAACGTACCGGGAA
CGAGACAAAGGAGATTCACC

Downstream 100 bases:

>100_bases
TGTTCTAGCGTCACGCCCCGACCCAACGGCTCACCGCCGTTGGGTTTTCTTTGTTTGAGGATTTTCTGTGCGTTCATTGT
TCTGGCGTATCCTCGCCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MRKTLIALMFAAALPTVAMAMPQDGGPMGGPLDGPRHGGQMHGMHGKGPYSQLDLSREQREQIRKIMGEQMHERKQTVEK
YLEKLSPADQKAMKDEMAANHKKAESDVRAVLKPDQQKKFDEIQKKQAERRAEWAEFKAWKAQQPQKAQ

Sequences:

>Translated_149_residues
MRKTLIALMFAAALPTVAMAMPQDGGPMGGPLDGPRHGGQMHGMHGKGPYSQLDLSREQREQIRKIMGEQMHERKQTVEK
YLEKLSPADQKAMKDEMAANHKKAESDVRAVLKPDQQKKFDEIQKKQAERRAEWAEFKAWKAQQPQKAQ
>Mature_149_residues
MRKTLIALMFAAALPTVAMAMPQDGGPMGGPLDGPRHGGQMHGMHGKGPYSQLDLSREQREQIRKIMGEQMHERKQTVEK
YLEKLSPADQKAMKDEMAANHKKAESDVRAVLKPDQQKKFDEIQKKQAERRAEWAEFKAWKAQQPQKAQ

Specific function: Unknown

COG id: COG3678

COG function: function code UNTP; P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16935; Mature: 16935

Theoretical pI: Translated: 10.35; Mature: 10.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
7.4 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
7.4 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKTLIALMFAAALPTVAMAMPQDGGPMGGPLDGPRHGGQMHGMHGKGPYSQLDLSREQR
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHH
EQIRKIMGEQMHERKQTVEKYLEKLSPADQKAMKDEMAANHKKAESDVRAVLKPDQQKKF
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
DEIQKKQAERRAEWAEFKAWKAQQPQKAQ
HHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MRKTLIALMFAAALPTVAMAMPQDGGPMGGPLDGPRHGGQMHGMHGKGPYSQLDLSREQR
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHH
EQIRKIMGEQMHERKQTVEKYLEKLSPADQKAMKDEMAANHKKAESDVRAVLKPDQQKKF
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
DEIQKKQAERRAEWAEFKAWKAQQPQKAQ
HHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA