| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77457642
Identifier: 77457642
GI number: 77457642
Start: 1585574
End: 1586107
Strand: Reverse
Name: 77457642
Synonym: Pfl01_1415
Alternate gene names: NA
Gene position: 1586107-1585574 (Counterclockwise)
Preceding gene: 77457644
Following gene: 77457639
Centisome position: 24.64
GC content: 50.94
Gene sequence:
>534_bases ATGCCAAGGGAACGTAATCATCTGCGGTATCAGTTGTACAAATCGCAAGCCAGGAAGTACGCGGGCATCACCTTCGCAAA GCTGCAGGAAGACCTGAAGCAAAAAGGGATCGTAGATGTCGATCACTCCAGAGTTCGTTTCGAAGCTATCGACGCTTTGG CACTGAATGCCTATGAACAATGGCTGGACCCTTATTTCTCCTGGCAGGAAGTTGTCAGGTGGAAGGCCAGAGAACCACTG GGATTCGATTTAGCAATCTGGTTTGACCATGAGCTATGCGGACTTTGCTTTGCGAATCCGAACCAGAGCCGATTGAGAGT AAAAATCGTGCGCCTGGAAGGAAAGCCGGGAAACGATCACCCGCTCAAGAGCCGAATCGCAACATTTGCATTGACCGCCG TGACGCACTTCGCGCGAATCGTAGGCAGCAAGCAAATCGAAATTCAGGAGCCTGTTCCCGGAGTAATACCGCTTTATCGG CAACTGGGGTTTGAGTTGGACTCGGAAGGTCGTCTTGTGAAGCCCATTGACTAA
Upstream 100 bases:
>100_bases ATTGGACAAAGGGCCAGTAGCGACAGGCAGGAGGCAGGCGCATAGGCTCGTTTGCAATCGCAACGACCATTGATGGGGGA CATGGAATGCGCGAGATCAT
Downstream 100 bases:
>100_bases GTCTAGTATCGGATCACTGTTCATTAAATGATCAACGCCGGAGACGCCATGAAAGCTGTTGCTGAGAACAAAGCGCCAGG CGCCAAATTGACCAGGGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 177; Mature: 176
Protein sequence:
>177_residues MPRERNHLRYQLYKSQARKYAGITFAKLQEDLKQKGIVDVDHSRVRFEAIDALALNAYEQWLDPYFSWQEVVRWKAREPL GFDLAIWFDHELCGLCFANPNQSRLRVKIVRLEGKPGNDHPLKSRIATFALTAVTHFARIVGSKQIEIQEPVPGVIPLYR QLGFELDSEGRLVKPID
Sequences:
>Translated_177_residues MPRERNHLRYQLYKSQARKYAGITFAKLQEDLKQKGIVDVDHSRVRFEAIDALALNAYEQWLDPYFSWQEVVRWKAREPL GFDLAIWFDHELCGLCFANPNQSRLRVKIVRLEGKPGNDHPLKSRIATFALTAVTHFARIVGSKQIEIQEPVPGVIPLYR QLGFELDSEGRLVKPID >Mature_176_residues PRERNHLRYQLYKSQARKYAGITFAKLQEDLKQKGIVDVDHSRVRFEAIDALALNAYEQWLDPYFSWQEVVRWKAREPLG FDLAIWFDHELCGLCFANPNQSRLRVKIVRLEGKPGNDHPLKSRIATFALTAVTHFARIVGSKQIEIQEPVPGVIPLYRQ LGFELDSEGRLVKPID
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20530; Mature: 20399
Theoretical pI: Translated: 9.38; Mature: 9.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRERNHLRYQLYKSQARKYAGITFAKLQEDLKQKGIVDVDHSRVRFEAIDALALNAYEQ CCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEECCCCEEHHHHHHHHHHHHHHH WLDPYFSWQEVVRWKAREPLGFDLAIWFDHELCGLCFANPNQSRLRVKIVRLEGKPGNDH HHCHHCCHHHHHHHHCCCCCCCEEEEEECCCCCEEEECCCCCCEEEEEEEEEECCCCCCC PLKSRIATFALTAVTHFARIVGSKQIEIQEPVPGVIPLYRQLGFELDSEGRLVKPID HHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHCCCCCCCCCEECCCC >Mature Secondary Structure PRERNHLRYQLYKSQARKYAGITFAKLQEDLKQKGIVDVDHSRVRFEAIDALALNAYEQ CCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEECCCCEEHHHHHHHHHHHHHHH WLDPYFSWQEVVRWKAREPLGFDLAIWFDHELCGLCFANPNQSRLRVKIVRLEGKPGNDH HHCHHCCHHHHHHHHCCCCCCCEEEEEECCCCCEEEECCCCCCEEEEEEEEEECCCCCCC PLKSRIATFALTAVTHFARIVGSKQIEIQEPVPGVIPLYRQLGFELDSEGRLVKPID HHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHCCCCCCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA