| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77457635
Identifier: 77457635
GI number: 77457635
Start: 1579043
End: 1580221
Strand: Reverse
Name: 77457635
Synonym: Pfl01_1408
Alternate gene names: NA
Gene position: 1580221-1579043 (Counterclockwise)
Preceding gene: 77457636
Following gene: 77457630
Centisome position: 24.54
GC content: 59.29
Gene sequence:
>1179_bases ATGTTGCTCAACCTGTTCAATGAAATGCGTGCAGCCAAGGTACCGGTGTCGGTGCGCGAGCTGCTCGACCTGATCAACGC GCTGAAACAGCGCGTGACCTTCGCCGACATGGACGAGTTCTACTACTTGTCCCGGGCGATTCTGGTGAAGGACGAACGGC ATTTCGACAAGTTCGACCGTGCGTTCGGCGCCTACTTCAACGGCCTGGAAAAACTCGACGACCACTTGCAGGCGCTGATC CCCGAAGACTGGCTGCGCAAGGAATTCGAGCGCTCGCTGACCGACGAGGAACGCGCGCAGATCCAGTCCCTCGGCGGCCT GGACAAGCTGATCGAGGAGTTCAAGAAACGCCTGGAAGAACAGAAGGAACGCCACGCCGGCGGCAACAAATGGATCGGCA CCGGCGGCACCAGCCCGTTCGGCTCCGGCGGTTTCAACCCGGAAGGCATTCGGGTCGGCGATGCCGGCAAACGCCAGGGC AAAGCGGTGAAAGTCTGGGATCAGCGCGAGTACAAAAACCTCGACGACTCCGTGGAACTGGGCACCCGCAACATCAAGGT CGCCCTGCGCCGCCTGCGCAAATTCGCGCGTCAGGGCGCGGCGGAAGAGCTGGACATCGACGGCACCATCGACCATACCG CCAAGGACGCCGGACTGCTGAACATCCAGATGCGCCCGGAACGGCGCAACACGGTGAAGCTGTTGCTGCTGTTCGACATC GGCGGCTCGATGGACGCCCACGTGAAGATCTGCGAGGAACTGTTCTCGGCCTGCAAGACCGAGTTCAAGCATCTGGAGTA CTTCTATTTCCACAACTTCATTTATGAGTCGGTGTGGAAGAACAACATGCGCCGCACCTCCGAGCGCACCTCGACCCAGG ACCTGCTGCACAAGTACGGCGCCGACTACAAAGTGATCTTCATCGGTGACGCCGCCATGGCGCCTTATGAAATCACCCAG GCCGGCGGCAGCGTCGAGCACTGGAACGAAGAGCCGGGTTACGTGTGGATGCAGCGCTTCATGGAGAAGTACAAGAAGCT CATCTGGATCAATCCGTACCCGAAAGATACGTGGGGCTACACCTCATCGACGAATATCGTGCGGGATTTGATCGAGGATC AGATGTATCCGTTGACGTTGCGCGGGCTGGAAGAAGGGATGCGGTTTCTGTCCAAGTAG
Upstream 100 bases:
>100_bases GCCGCTGGCCGGTGCACTGGTGAAGAACGAACAGGACGTGCAACTGCTTGAGCGCCTGGCGTTCATGAGCCGTCGCGGCA CCCGCTAAGAGGCTGACGCC
Downstream 100 bases:
>100_bases TCCGCAACGGCTCCCCCGCCAGCGGCGGGAGAACAATCAAAAGCGCTTCAGATATTCGATGTGTTCCCGGTGTGCCACTT CCTGCACCACCGGGCGCAAC
Product: hypothetical protein
Products: NA
Alternate protein names: Cytoplasmic Protein; Von Willebrand Factor Type A(VWA) Domain Protein; VWA Containing CoxE-Like Family Protein
Number of amino acids: Translated: 392; Mature: 392
Protein sequence:
>392_residues MLLNLFNEMRAAKVPVSVRELLDLINALKQRVTFADMDEFYYLSRAILVKDERHFDKFDRAFGAYFNGLEKLDDHLQALI PEDWLRKEFERSLTDEERAQIQSLGGLDKLIEEFKKRLEEQKERHAGGNKWIGTGGTSPFGSGGFNPEGIRVGDAGKRQG KAVKVWDQREYKNLDDSVELGTRNIKVALRRLRKFARQGAAEELDIDGTIDHTAKDAGLLNIQMRPERRNTVKLLLLFDI GGSMDAHVKICEELFSACKTEFKHLEYFYFHNFIYESVWKNNMRRTSERTSTQDLLHKYGADYKVIFIGDAAMAPYEITQ AGGSVEHWNEEPGYVWMQRFMEKYKKLIWINPYPKDTWGYTSSTNIVRDLIEDQMYPLTLRGLEEGMRFLSK
Sequences:
>Translated_392_residues MLLNLFNEMRAAKVPVSVRELLDLINALKQRVTFADMDEFYYLSRAILVKDERHFDKFDRAFGAYFNGLEKLDDHLQALI PEDWLRKEFERSLTDEERAQIQSLGGLDKLIEEFKKRLEEQKERHAGGNKWIGTGGTSPFGSGGFNPEGIRVGDAGKRQG KAVKVWDQREYKNLDDSVELGTRNIKVALRRLRKFARQGAAEELDIDGTIDHTAKDAGLLNIQMRPERRNTVKLLLLFDI GGSMDAHVKICEELFSACKTEFKHLEYFYFHNFIYESVWKNNMRRTSERTSTQDLLHKYGADYKVIFIGDAAMAPYEITQ AGGSVEHWNEEPGYVWMQRFMEKYKKLIWINPYPKDTWGYTSSTNIVRDLIEDQMYPLTLRGLEEGMRFLSK >Mature_392_residues MLLNLFNEMRAAKVPVSVRELLDLINALKQRVTFADMDEFYYLSRAILVKDERHFDKFDRAFGAYFNGLEKLDDHLQALI PEDWLRKEFERSLTDEERAQIQSLGGLDKLIEEFKKRLEEQKERHAGGNKWIGTGGTSPFGSGGFNPEGIRVGDAGKRQG KAVKVWDQREYKNLDDSVELGTRNIKVALRRLRKFARQGAAEELDIDGTIDHTAKDAGLLNIQMRPERRNTVKLLLLFDI GGSMDAHVKICEELFSACKTEFKHLEYFYFHNFIYESVWKNNMRRTSERTSTQDLLHKYGADYKVIFIGDAAMAPYEITQ AGGSVEHWNEEPGYVWMQRFMEKYKKLIWINPYPKDTWGYTSSTNIVRDLIEDQMYPLTLRGLEEGMRFLSK
Specific function: Unknown
COG id: COG3825
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45582; Mature: 45582
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLNLFNEMRAAKVPVSVRELLDLINALKQRVTFADMDEFYYLSRAILVKDERHFDKFDR CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHH AFGAYFNGLEKLDDHLQALIPEDWLRKEFERSLTDEERAQIQSLGGLDKLIEEFKKRLEE HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHH QKERHAGGNKWIGTGGTSPFGSGGFNPEGIRVGDAGKRQGKAVKVWDQREYKNLDDSVEL HHHHHCCCCCEEECCCCCCCCCCCCCCCCEEECCCCCCCCCEEEEECCHHHCCCCCHHHH GTRNIKVALRRLRKFARQGAAEELDIDGTIDHTAKDAGLLNIQMRPERRNTVKLLLLFDI CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEEEEEC GGSMDAHVKICEELFSACKTEFKHLEYFYFHNFIYESVWKNNMRRTSERTSTQDLLHKYG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC ADYKVIFIGDAAMAPYEITQAGGSVEHWNEEPGYVWMQRFMEKYKKLIWINPYPKDTWGY CCEEEEEEECCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHEEECCCCCCCCCCC TSSTNIVRDLIEDQMYPLTLRGLEEGMRFLSK CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MLLNLFNEMRAAKVPVSVRELLDLINALKQRVTFADMDEFYYLSRAILVKDERHFDKFDR CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHH AFGAYFNGLEKLDDHLQALIPEDWLRKEFERSLTDEERAQIQSLGGLDKLIEEFKKRLEE HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHH QKERHAGGNKWIGTGGTSPFGSGGFNPEGIRVGDAGKRQGKAVKVWDQREYKNLDDSVEL HHHHHCCCCCEEECCCCCCCCCCCCCCCCEEECCCCCCCCCEEEEECCHHHCCCCCHHHH GTRNIKVALRRLRKFARQGAAEELDIDGTIDHTAKDAGLLNIQMRPERRNTVKLLLLFDI CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEEEEEC GGSMDAHVKICEELFSACKTEFKHLEYFYFHNFIYESVWKNNMRRTSERTSTQDLLHKYG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC ADYKVIFIGDAAMAPYEITQAGGSVEHWNEEPGYVWMQRFMEKYKKLIWINPYPKDTWGY CCEEEEEEECCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHEEECCCCCCCCCCC TSSTNIVRDLIEDQMYPLTLRGLEEGMRFLSK CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA