| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is 77457583
Identifier: 77457583
GI number: 77457583
Start: 1531360
End: 1532181
Strand: Reverse
Name: 77457583
Synonym: Pfl01_1356
Alternate gene names: NA
Gene position: 1532181-1531360 (Counterclockwise)
Preceding gene: 77457584
Following gene: 77457580
Centisome position: 23.8
GC content: 59.61
Gene sequence:
>822_bases ATGAGTGAGCTGGCGGATAAGGTCCAACAGGATTTGGTTGAGGCCATCGATAACGATGACCTGGTTCTGCCAACGTTACC GGAAGTGGCCCTGCAGATTCGCAAGGCCGCTGAAGATCCGGATATCAGCGTCAGCGACCTGAGCAAAGTGATCGGCCGCG ACACGGCGCTGTCGGCGCGCCTGATCAAAGTGGTGAACAGCCCGCTGCTGCGCGCCACCCAGGAAGTCACCGACCTGCAC ACCGCCATTACCCGGCTCGGCGTCAATTACAGCAGCAACCTGGCGATCGGTCTGGTGATGGAGCAGATCTTTCACGCCCG TTCCGACGTGGTCGAACAGAAGATGCGCGAAGTCTGGCGCAAAAGCCTGGAAATCGCCGGCGTCAGCTACGCCCTGTGCC GTCGGTATACCCAGCTCAAGCCCGATCAGGCCGCGCTCGGCGGACTGGTTCATCAGATCGGCGTGCTGCCGATCCTGACC TATGCCGAAGATCACTACGAACTGCTGTCCGATCCGGTAAGCCTCAACCATGTGATCGATCACATTCACCCGTTGCTCGG CGACAAATTACTGCGGGTCTGGGAGTTTCCGGAGCGTCTGGTGGAATTGCCGGGGCTGTATCAGGACCTCAAGCGCGAAT CGCAGCAGATCGATTACGTCGACATCGTGCAAGTGGCCAGCCTGTATTGCCACAAGGACACCGATCACCCGCTGGCCCGC ATCGATCCGTTCAGCGTGCCGGCATTCCGCAAGCTCGGCATCGACCCGGAGAACAAGGCGCTGTGCACCGATCTGGAAGA ATCGCGGTCGATGTTCTACTGA
Upstream 100 bases:
>100_bases GTCCGGCGCTGCACTTGCTCGACCTGCCATACGAACTGGATCGCGACCGCGAAATCCAGCGTTGATCGCAGCATTTGTTG CAACACCCTAGAGAAACGAC
Downstream 100 bases:
>100_bases TCAACCGGCGACAAAACTCACCCGTACCTTCAAACCCGCCTGTTCACCATCGTGCAGACTGATCTGCGCCAGATGCGCGC GGCAGATCTCCCCGACAATC
Product: signal transduction protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 273; Mature: 272
Protein sequence:
>273_residues MSELADKVQQDLVEAIDNDDLVLPTLPEVALQIRKAAEDPDISVSDLSKVIGRDTALSARLIKVVNSPLLRATQEVTDLH TAITRLGVNYSSNLAIGLVMEQIFHARSDVVEQKMREVWRKSLEIAGVSYALCRRYTQLKPDQAALGGLVHQIGVLPILT YAEDHYELLSDPVSLNHVIDHIHPLLGDKLLRVWEFPERLVELPGLYQDLKRESQQIDYVDIVQVASLYCHKDTDHPLAR IDPFSVPAFRKLGIDPENKALCTDLEESRSMFY
Sequences:
>Translated_273_residues MSELADKVQQDLVEAIDNDDLVLPTLPEVALQIRKAAEDPDISVSDLSKVIGRDTALSARLIKVVNSPLLRATQEVTDLH TAITRLGVNYSSNLAIGLVMEQIFHARSDVVEQKMREVWRKSLEIAGVSYALCRRYTQLKPDQAALGGLVHQIGVLPILT YAEDHYELLSDPVSLNHVIDHIHPLLGDKLLRVWEFPERLVELPGLYQDLKRESQQIDYVDIVQVASLYCHKDTDHPLAR IDPFSVPAFRKLGIDPENKALCTDLEESRSMFY >Mature_272_residues SELADKVQQDLVEAIDNDDLVLPTLPEVALQIRKAAEDPDISVSDLSKVIGRDTALSARLIKVVNSPLLRATQEVTDLHT AITRLGVNYSSNLAIGLVMEQIFHARSDVVEQKMREVWRKSLEIAGVSYALCRRYTQLKPDQAALGGLVHQIGVLPILTY AEDHYELLSDPVSLNHVIDHIHPLLGDKLLRVWEFPERLVELPGLYQDLKRESQQIDYVDIVQVASLYCHKDTDHPLARI DPFSVPAFRKLGIDPENKALCTDLEESRSMFY
Specific function: Unknown
COG id: COG1639
COG function: function code T; Predicted signal transduction protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR013976 [H]
Pfam domain/function: PF02518 HATPase_c; PF08668 HDOD [H]
EC number: NA
Molecular weight: Translated: 30770; Mature: 30638
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSELADKVQQDLVEAIDNDDLVLPTLPEVALQIRKAAEDPDISVSDLSKVIGRDTALSAR CCHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHH LIKVVNSPLLRATQEVTDLHTAITRLGVNYSSNLAIGLVMEQIFHARSDVVEQKMREVWR HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH KSLEIAGVSYALCRRYTQLKPDQAALGGLVHQIGVLPILTYAEDHYELLSDPVSLNHVID HHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH HIHPLLGDKLLRVWEFPERLVELPGLYQDLKRESQQIDYVDIVQVASLYCHKDTDHPLAR HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHH IDPFSVPAFRKLGIDPENKALCTDLEESRSMFY CCCCCCCHHHHCCCCCCCCHHHHCHHHHHCCCC >Mature Secondary Structure SELADKVQQDLVEAIDNDDLVLPTLPEVALQIRKAAEDPDISVSDLSKVIGRDTALSAR CHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHH LIKVVNSPLLRATQEVTDLHTAITRLGVNYSSNLAIGLVMEQIFHARSDVVEQKMREVWR HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH KSLEIAGVSYALCRRYTQLKPDQAALGGLVHQIGVLPILTYAEDHYELLSDPVSLNHVID HHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH HIHPLLGDKLLRVWEFPERLVELPGLYQDLKRESQQIDYVDIVQVASLYCHKDTDHPLAR HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHH IDPFSVPAFRKLGIDPENKALCTDLEESRSMFY CCCCCCCHHHHCCCCCCCCHHHHCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9665876 [H]