| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is yflP [H]
Identifier: 77457580
GI number: 77457580
Start: 1527882
End: 1528859
Strand: Reverse
Name: yflP [H]
Synonym: Pfl01_1353
Alternate gene names: 77457580
Gene position: 1528859-1527882 (Counterclockwise)
Preceding gene: 77457583
Following gene: 77457579
Centisome position: 23.75
GC content: 62.99
Gene sequence:
>978_bases ATGAACCGATCCCTGCGCCGTTTCGCCCTCGCCGCCGGTTGCGTGCTGTTCGCCGGCCAACTGATGGCCGAACCGAAACG TCCGGAATGCATTGCCCCCGCCTCCCCCGGCGGCGGTTTCGACCTGACCTGCAAACTGGCGCAAAGCGCGCTGGTCAACG AAAAACTGCTGACCAAACCGATGCGCGTGACCTACATGCCCGGCGGCGTCGGCGCGGTGGCGTACAACGCCGTCGTGGCG CAGCGTCCGGCCGATGCCGGCACGCTGGTGGCGTGGTCCAGCGGCTCGCTGCTCAACCTGGCTCAGGGCAAATTCGGCCG GTTCGATGAAACCAACGTACGCTGGCTGGCGGCGGTCGGCACCAGCTACGGCGCCATCGCGGTGAAAAGCGATTCGCCCT ACAAAACCCTCGATGATCTCGTGCAGGCGCTGAAGAAAGATCCGAGTTCCGTGGTCATCGGCTCCGGCGGTACCGTCGGC AGCCAGGACTGGATGCAGACCGCACTGATCGCAAAAGCCGCCGGGATCAACCCGCGCGACCTGCGCTACGTCGCCCTCGA AGGGGGTGGAGAGATCGCTACCGCGCTGCTCGGCGGTCATATCCAGGTCGGCAGTACCGACATCTCCGACTCCATGCCGC ATATCCAGAGCGGCGACATGCGCCTGCTGGCCGTGTTTGCCGAAAAACGCCTGGATGAGCCGGAAATGAAGGACATTCCT ACCGCGCGTGAACAAGGCTACGACATCGTCTGGCCGGTGGTGCGCGGCTTCTACCTCGGGCCAAAAGTCAGCGATGAAGA CTACGCCTGGTGGAAAGACTCCTTCGACAAACTGCTGGCCTCGGAAGACTTCGCCAAGCTGCGTGATCAGCGTGAACTCT TCCCGTTCGCCATGACCGGTCCCGAGCTGGACACCTACGTCAAGAAGCAAGTGGCGGACTACAAGGTACTGGCCAAAGAG TTCGGCCTGATTCAGTGA
Upstream 100 bases:
>100_bases GCGGCGTTCAACCCGTCCGGGTCTGAGCCTGTTAGCCTGCGCGCGCGAAACCGCCGCACCTGAAACATCCCCAAAAACAA CAACTCCCGTGGAGACACTC
Downstream 100 bases:
>100_bases TCGTCTCGGTCTAGCGTCCATGGCCCTTTCAGCGGGGCCATGGCAGGAGTTCCCTCATGCTTATTCAACGTATTTTTGCC TCGGTGCTGTTGCTGGCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 325; Mature: 325
Protein sequence:
>325_residues MNRSLRRFALAAGCVLFAGQLMAEPKRPECIAPASPGGGFDLTCKLAQSALVNEKLLTKPMRVTYMPGGVGAVAYNAVVA QRPADAGTLVAWSSGSLLNLAQGKFGRFDETNVRWLAAVGTSYGAIAVKSDSPYKTLDDLVQALKKDPSSVVIGSGGTVG SQDWMQTALIAKAAGINPRDLRYVALEGGGEIATALLGGHIQVGSTDISDSMPHIQSGDMRLLAVFAEKRLDEPEMKDIP TAREQGYDIVWPVVRGFYLGPKVSDEDYAWWKDSFDKLLASEDFAKLRDQRELFPFAMTGPELDTYVKKQVADYKVLAKE FGLIQ
Sequences:
>Translated_325_residues MNRSLRRFALAAGCVLFAGQLMAEPKRPECIAPASPGGGFDLTCKLAQSALVNEKLLTKPMRVTYMPGGVGAVAYNAVVA QRPADAGTLVAWSSGSLLNLAQGKFGRFDETNVRWLAAVGTSYGAIAVKSDSPYKTLDDLVQALKKDPSSVVIGSGGTVG SQDWMQTALIAKAAGINPRDLRYVALEGGGEIATALLGGHIQVGSTDISDSMPHIQSGDMRLLAVFAEKRLDEPEMKDIP TAREQGYDIVWPVVRGFYLGPKVSDEDYAWWKDSFDKLLASEDFAKLRDQRELFPFAMTGPELDTYVKKQVADYKVLAKE FGLIQ >Mature_325_residues MNRSLRRFALAAGCVLFAGQLMAEPKRPECIAPASPGGGFDLTCKLAQSALVNEKLLTKPMRVTYMPGGVGAVAYNAVVA QRPADAGTLVAWSSGSLLNLAQGKFGRFDETNVRWLAAVGTSYGAIAVKSDSPYKTLDDLVQALKKDPSSVVIGSGGTVG SQDWMQTALIAKAAGINPRDLRYVALEGGGEIATALLGGHIQVGSTDISDSMPHIQSGDMRLLAVFAEKRLDEPEMKDIP TAREQGYDIVWPVVRGFYLGPKVSDEDYAWWKDSFDKLLASEDFAKLRDQRELFPFAMTGPELDTYVKKQVADYKVLAKE FGLIQ
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 35143; Mature: 35143
Theoretical pI: Translated: 5.93; Mature: 5.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRSLRRFALAAGCVLFAGQLMAEPKRPECIAPASPGGGFDLTCKLAQSALVNEKLLTKP CCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCEEEHHHHHHHHHHHHHHCCC MRVTYMPGGVGAVAYNAVVAQRPADAGTLVAWSSGSLLNLAQGKFGRFDETNVRWLAAVG CEEEECCCCCHHHHHHHHHHCCCCCCCEEEEECCCCEEEECCCCCCCCCCCCCEEEEEEC TSYGAIAVKSDSPYKTLDDLVQALKKDPSSVVIGSGGTVGSQDWMQTALIAKAAGINPRD CCCCEEEEECCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCC LRYVALEGGGEIATALLGGHIQVGSTDISDSMPHIQSGDMRLLAVFAEKRLDEPEMKDIP EEEEEEECCCCEEEHHHCCEEEECCCCCCCCCCCCCCCCEEEEEEEHHHHCCCCCHHCCC TAREQGYDIVWPVVRGFYLGPKVSDEDYAWWKDSFDKLLASEDFAKLRDQRELFPFAMTG CHHHCCCEEEEHHHHCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECC PELDTYVKKQVADYKVLAKEFGLIQ CCHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MNRSLRRFALAAGCVLFAGQLMAEPKRPECIAPASPGGGFDLTCKLAQSALVNEKLLTKP CCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCEEEHHHHHHHHHHHHHHCCC MRVTYMPGGVGAVAYNAVVAQRPADAGTLVAWSSGSLLNLAQGKFGRFDETNVRWLAAVG CEEEECCCCCHHHHHHHHHHCCCCCCCEEEEECCCCEEEECCCCCCCCCCCCCEEEEEEC TSYGAIAVKSDSPYKTLDDLVQALKKDPSSVVIGSGGTVGSQDWMQTALIAKAAGINPRD CCCCEEEEECCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCC LRYVALEGGGEIATALLGGHIQVGSTDISDSMPHIQSGDMRLLAVFAEKRLDEPEMKDIP EEEEEEECCCCEEEHHHCCEEEECCCCCCCCCCCCCCCCEEEEEEEHHHHCCCCCHHCCC TAREQGYDIVWPVVRGFYLGPKVSDEDYAWWKDSFDKLLASEDFAKLRDQRELFPFAMTG CHHHCCCEEEEHHHHCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECC PELDTYVKKQVADYKVLAKEFGLIQ CCHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9272861; 9384377 [H]