| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is mdtL [H]
Identifier: 77457539
GI number: 77457539
Start: 1486766
End: 1487932
Strand: Reverse
Name: mdtL [H]
Synonym: Pfl01_1312
Alternate gene names: 77457539
Gene position: 1487932-1486766 (Counterclockwise)
Preceding gene: 77457544
Following gene: 77457537
Centisome position: 23.11
GC content: 62.9
Gene sequence:
>1167_bases ATGAACCCCAGCCTCATTCTGCTCATCACCTGTTCCACCGTGTTCCTCGCCCAGTTGGGCATGAGCATTTACCTGCCGGC GCTGCCACAGATCGCCAAGCATTTACAGGTCGATGCAACACAGGTGGCCTGGGGCTTGTCGCTGTACCTGATCGGCATGG CGCTGCCGATGCTGCTGTGGGGCAGTCTGGCGCAGCGCATCGGCCGCAAACCGGTGCTGCTCGCGGCGCTGGGGATTTAT GGGCTGGCGAACCTGGCGTTGCCGCTGGGTGCGACGCTGGAATCGTTCCTGTTGCTGCGACTGCTTCAGGGGATCGGCGC CAGCGGCATTTCGGTGATGGCGCGGGTGCTGATTCGAGACAGCTTTCGGGGGGATCTGCTGGCGAAGGCGTTGTCGTGGA TTTCGATTTCGTTCGTTGTCGCGCTCGGGATCGGGCAATACGCCGGTTCGCTCATTCAGGTGACGCTGGGCTGGCAGGCG ATCTTTTATCTGCTGGGCGCGGTCAGCCTGTTGATGGCCGCGATAGTCTCGCGCCTGAGTTTCCCGAAACTCGTCGAAGC GCCCACAACCGCTTCGCCCTGGGAGGTCTATCGAACGATCCTGATCCATCGGGCGTTTCTGCTGCCGGCGCTTGCGGGCG GTCTGGGTTATGGCGTGATCATCGCGTTCAACAGCGCTGCGCCGTTGATTCTGCAAGGCCCGTTCAACTGGTCGGCGACC GCATATGGGTTGCTGGGCTGGCCGATCAGCGCCGCATATTTCCTGGGGGCGCTGGCGGTCAATCGCTTTGTGCTGCGTAC CGGTCAGCACCGGCTGATGACACTGGGGGTCAGCCTGGTGATGGCCGGCACTGGCGTGATGCTGGCCGGCAGTCTGTTGG CCAGCTCGATGGCCTGGCTGCTCTGGCTGCCTTACTGCGTCGCCGTGTTCGGCCAGTCGCTGAACTATCCGATCAGCCTG TCACGGGCCAACGATGGTGCGCCGATTGCCGGCGCTTACGCGATGGCCCTGAGCGGTTTCATCCACCAATTGATGGCTGC ACTGATCGGCGCGGTGGCCAGCCTGCTCGCCAGTCCGCAGGCATGGCCGCTATCGATGCTGTGCTGCGTTCTGGCATTTG GCGCGGTGCTCTGCACGAGGTTAACGCCCGATCATCAGCCCGCTTAA
Upstream 100 bases:
>100_bases CACACAGCACTACCGGACGTAGCCGATGCTGGCCTGACGTATCATTCGCCTGGTTTTTTGCTGACCGACAGTGAACATCT CTGCCCCCCACGGACGACTC
Downstream 100 bases:
>100_bases AACGCGCTGCGGAAAATCTCCTCGATCTGCCGCTGATCCGCCACTCGCGGATTGGTGAAGCCGCAGGCGTCTTTCAGGGC GTTGGCGGCGAGCACCGGGA
Product: major facilitator transporter
Products: Proton [Cytoplasm]; drug [Periplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 388; Mature: 388
Protein sequence:
>388_residues MNPSLILLITCSTVFLAQLGMSIYLPALPQIAKHLQVDATQVAWGLSLYLIGMALPMLLWGSLAQRIGRKPVLLAALGIY GLANLALPLGATLESFLLLRLLQGIGASGISVMARVLIRDSFRGDLLAKALSWISISFVVALGIGQYAGSLIQVTLGWQA IFYLLGAVSLLMAAIVSRLSFPKLVEAPTTASPWEVYRTILIHRAFLLPALAGGLGYGVIIAFNSAAPLILQGPFNWSAT AYGLLGWPISAAYFLGALAVNRFVLRTGQHRLMTLGVSLVMAGTGVMLAGSLLASSMAWLLWLPYCVAVFGQSLNYPISL SRANDGAPIAGAYAMALSGFIHQLMAALIGAVASLLASPQAWPLSMLCCVLAFGAVLCTRLTPDHQPA
Sequences:
>Translated_388_residues MNPSLILLITCSTVFLAQLGMSIYLPALPQIAKHLQVDATQVAWGLSLYLIGMALPMLLWGSLAQRIGRKPVLLAALGIY GLANLALPLGATLESFLLLRLLQGIGASGISVMARVLIRDSFRGDLLAKALSWISISFVVALGIGQYAGSLIQVTLGWQA IFYLLGAVSLLMAAIVSRLSFPKLVEAPTTASPWEVYRTILIHRAFLLPALAGGLGYGVIIAFNSAAPLILQGPFNWSAT AYGLLGWPISAAYFLGALAVNRFVLRTGQHRLMTLGVSLVMAGTGVMLAGSLLASSMAWLLWLPYCVAVFGQSLNYPISL SRANDGAPIAGAYAMALSGFIHQLMAALIGAVASLLASPQAWPLSMLCCVLAFGAVLCTRLTPDHQPA >Mature_388_residues MNPSLILLITCSTVFLAQLGMSIYLPALPQIAKHLQVDATQVAWGLSLYLIGMALPMLLWGSLAQRIGRKPVLLAALGIY GLANLALPLGATLESFLLLRLLQGIGASGISVMARVLIRDSFRGDLLAKALSWISISFVVALGIGQYAGSLIQVTLGWQA IFYLLGAVSLLMAAIVSRLSFPKLVEAPTTASPWEVYRTILIHRAFLLPALAGGLGYGVIIAFNSAAPLILQGPFNWSAT AYGLLGWPISAAYFLGALAVNRFVLRTGQHRLMTLGVSLVMAGTGVMLAGSLLASSMAWLLWLPYCVAVFGQSLNYPISL SRANDGAPIAGAYAMALSGFIHQLMAALIGAVASLLASPQAWPLSMLCCVLAFGAVLCTRLTPDHQPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. DHA1 family. MdtL (TC 2.A.1.2.22) subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790146, Length=243, Percent_Identity=29.2181069958848, Blast_Score=91, Evalue=1e-19, Organism=Escherichia coli, GI1788509, Length=355, Percent_Identity=25.9154929577465, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI48994889, Length=322, Percent_Identity=26.7080745341615, Blast_Score=86, Evalue=5e-18, Organism=Escherichia coli, GI1790794, Length=310, Percent_Identity=26.7741935483871, Blast_Score=79, Evalue=7e-16, Organism=Escherichia coli, GI87082312, Length=385, Percent_Identity=25.974025974026, Blast_Score=72, Evalue=7e-14, Organism=Escherichia coli, GI1787065, Length=299, Percent_Identity=25.752508361204, Blast_Score=71, Evalue=1e-13, Organism=Escherichia coli, GI87081738, Length=156, Percent_Identity=32.6923076923077, Blast_Score=62, Evalue=6e-11, Organism=Saccharomyces cerevisiae, GI6325455, Length=153, Percent_Identity=27.4509803921569, Blast_Score=65, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6324264, Length=159, Percent_Identity=32.7044025157233, Blast_Score=63, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 40976; Mature: 40976
Theoretical pI: Translated: 9.79; Mature: 9.79
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPSLILLITCSTVFLAQLGMSIYLPALPQIAKHLQVDATQVAWGLSLYLIGMALPMLLW CCCCEEEEEHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH GSLAQRIGRKPVLLAALGIYGLANLALPLGATLESFLLLRLLQGIGASGISVMARVLIRD HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH SFRGDLLAKALSWISISFVVALGIGQYAGSLIQVTLGWQAIFYLLGAVSLLMAAIVSRLS CCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHEEEHHHHHHHHHHHHHHHHHHHHHHHHCC FPKLVEAPTTASPWEVYRTILIHRAFLLPALAGGLGYGVIIAFNSAAPLILQGPFNWSAT CCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEECCCCCCCH AYGLLGWPISAAYFLGALAVNRFVLRTGQHRLMTLGVSLVMAGTGVMLAGSLLASSMAWL HHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH LWLPYCVAVFGQSLNYPISLSRANDGAPIAGAYAMALSGFIHQLMAALIGAVASLLASPQ HHHHHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC AWPLSMLCCVLAFGAVLCTRLTPDHQPA CCHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MNPSLILLITCSTVFLAQLGMSIYLPALPQIAKHLQVDATQVAWGLSLYLIGMALPMLLW CCCCEEEEEHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH GSLAQRIGRKPVLLAALGIYGLANLALPLGATLESFLLLRLLQGIGASGISVMARVLIRD HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH SFRGDLLAKALSWISISFVVALGIGQYAGSLIQVTLGWQAIFYLLGAVSLLMAAIVSRLS CCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHEEEHHHHHHHHHHHHHHHHHHHHHHHHCC FPKLVEAPTTASPWEVYRTILIHRAFLLPALAGGLGYGVIIAFNSAAPLILQGPFNWSAT CCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEECCCCCCCH AYGLLGWPISAAYFLGALAVNRFVLRTGQHRLMTLGVSLVMAGTGVMLAGSLLASSMAWL HHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH LWLPYCVAVFGQSLNYPISLSRANDGAPIAGAYAMALSGFIHQLMAALIGAVASLLASPQ HHHHHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC AWPLSMLCCVLAFGAVLCTRLTPDHQPA CCHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; drug [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + drug [Cytoplasm] = Proton [Cytoplasm] + drug [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA