| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is tam [H]
Identifier: 77457503
GI number: 77457503
Start: 1449010
End: 1449825
Strand: Reverse
Name: tam [H]
Synonym: Pfl01_1276
Alternate gene names: 77457503
Gene position: 1449825-1449010 (Counterclockwise)
Preceding gene: 77457504
Following gene: 77457491
Centisome position: 22.52
GC content: 61.4
Gene sequence:
>816_bases ATGATCACCCGACTCAACCCCGCTCCCGTCGACAAAGACTGGGACGCCAAGGCGTACCAGCAGTTTTCCCGTCTCAGGCA ACAACCGGTCGATGAATTGCTCGGCCGTGTCGACCTGGAAAATCCCCAACGCATTTATGACCTGGGCTGCGGCACCGGGA TTGCCACAAAGATTCTGGCGGATCGCTGGCCCGAGGCAGAGATCAAGGGCATCGACAGTTCGAAAGACATGCTTCAGGTC GCCCGCTGCCTGCCGATCAAGGCGCGCTGGCAACACGCCGAACTGCAACACTGGAAACCCCGCAAGCCGGCCGACCTGTT GTTCGCCGCGGCCGTGCTGCATTTCATCGATGACCATCAAACGCTGTTGCCGGGACTGCTTCGCCACCTCAACCCCGGCG GGTGCCTCGCCGCGCACATGCCGGACTGGCGTGATGCGCTGTGGTATCGGCTGATGCTCGGCACCCTCAACGATGCCGGC CCCTGCGGCCGCCCCATCGGCACTGCGCAATTGCGCCAGCGCATGGCCGCGCGGACGTTGTTGTCGCTGGAGGATTACTA CCGGCTGCTGGCTCCGCGGACCCAGTCGCTGGATATCTGGGAAACCGAGCAGTTGCAGGTCGTGCGCGGAAGCTCACCGA TTTATGACTGGGTGAAGGTGTCGGCGCTGCGGCCGGTGATGCAGGGACTGACGTCAGAGGAACAGGCACGCTTCATTTAT CACTACCTGAGGCGGGTGCATGCGCACTATCCGCAGGAGGAAAACGGCCATACGTTGTTTGCGTTCAAGCGGATTTTCAT TGTTGCCAAGGTATGA
Upstream 100 bases:
>100_bases CTCCACCCCCACCCGCTTCCGTTATCTGTTGATGTTGGTCCCCCAAGACTCGAGCCAGGTTGTCATCGGAAGACCCTGCT GATCACCGGAGGACCGCCTC
Downstream 100 bases:
>100_bases AGTTCAAAGGATCGCAGCCTTCAACAGGCTGCGACCCCTCGAATTCGACGATTACTCGCGGGATTCGGTACCCAGCTCAT CCCACACCGACTCGGCCAGA
Product: trans-aconitate 2-methyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 271; Mature: 271
Protein sequence:
>271_residues MITRLNPAPVDKDWDAKAYQQFSRLRQQPVDELLGRVDLENPQRIYDLGCGTGIATKILADRWPEAEIKGIDSSKDMLQV ARCLPIKARWQHAELQHWKPRKPADLLFAAAVLHFIDDHQTLLPGLLRHLNPGGCLAAHMPDWRDALWYRLMLGTLNDAG PCGRPIGTAQLRQRMAARTLLSLEDYYRLLAPRTQSLDIWETEQLQVVRGSSPIYDWVKVSALRPVMQGLTSEEQARFIY HYLRRVHAHYPQEENGHTLFAFKRIFIVAKV
Sequences:
>Translated_271_residues MITRLNPAPVDKDWDAKAYQQFSRLRQQPVDELLGRVDLENPQRIYDLGCGTGIATKILADRWPEAEIKGIDSSKDMLQV ARCLPIKARWQHAELQHWKPRKPADLLFAAAVLHFIDDHQTLLPGLLRHLNPGGCLAAHMPDWRDALWYRLMLGTLNDAG PCGRPIGTAQLRQRMAARTLLSLEDYYRLLAPRTQSLDIWETEQLQVVRGSSPIYDWVKVSALRPVMQGLTSEEQARFIY HYLRRVHAHYPQEENGHTLFAFKRIFIVAKV >Mature_271_residues MITRLNPAPVDKDWDAKAYQQFSRLRQQPVDELLGRVDLENPQRIYDLGCGTGIATKILADRWPEAEIKGIDSSKDMLQV ARCLPIKARWQHAELQHWKPRKPADLLFAAAVLHFIDDHQTLLPGLLRHLNPGGCLAAHMPDWRDALWYRLMLGTLNDAG PCGRPIGTAQLRQRMAARTLLSLEDYYRLLAPRTQSLDIWETEQLQVVRGSSPIYDWVKVSALRPVMQGLTSEEQARFIY HYLRRVHAHYPQEENGHTLFAFKRIFIVAKV
Specific function: Catalyzes the S-adenosylmethionine monomethyl esterification of trans-aconitate [H]
COG id: COG4106
COG function: function code R; Trans-aconitate methyltransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. Tam family [H]
Homologues:
Organism=Escherichia coli, GI1787798, Length=259, Percent_Identity=37.4517374517375, Blast_Score=169, Evalue=2e-43,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013216 - InterPro: IPR023149 [H]
Pfam domain/function: PF08241 Methyltransf_11 [H]
EC number: =2.1.1.144 [H]
Molecular weight: Translated: 31190; Mature: 31190
Theoretical pI: Translated: 9.11; Mature: 9.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITRLNPAPVDKDWDAKAYQQFSRLRQQPVDELLGRVDLENPQRIYDLGCGTGIATKILA CCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHCCCCCHHHHHHHH DRWPEAEIKGIDSSKDMLQVARCLPIKARWQHAELQHWKPRKPADLLFAAAVLHFIDDHQ HCCCCCHHCCCCCHHHHHHHHHHCCCHHHCCHHHHHCCCCCCHHHHHHHHHHHHHHCCHH TLLPGLLRHLNPGGCLAAHMPDWRDALWYRLMLGTLNDAGPCGRPIGTAQLRQRMAARTL HHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH LSLEDYYRLLAPRTQSLDIWETEQLQVVRGSSPIYDWVKVSALRPVMQGLTSEEQARFIY HHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHH HYLRRVHAHYPQEENGHTLFAFKRIFIVAKV HHHHHHHHHCCCCCCCCEEHHHHHHHHHCCC >Mature Secondary Structure MITRLNPAPVDKDWDAKAYQQFSRLRQQPVDELLGRVDLENPQRIYDLGCGTGIATKILA CCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHCCCCCHHHHHHHH DRWPEAEIKGIDSSKDMLQVARCLPIKARWQHAELQHWKPRKPADLLFAAAVLHFIDDHQ HCCCCCHHCCCCCHHHHHHHHHHCCCHHHCCHHHHHCCCCCCHHHHHHHHHHHHHHCCHH TLLPGLLRHLNPGGCLAAHMPDWRDALWYRLMLGTLNDAGPCGRPIGTAQLRQRMAARTL HHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH LSLEDYYRLLAPRTQSLDIWETEQLQVVRGSSPIYDWVKVSALRPVMQGLTSEEQARFIY HHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHH HYLRRVHAHYPQEENGHTLFAFKRIFIVAKV HHHHHHHHHCCCCCCCCEEHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA