| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is glnD [H]
Identifier: 77457326
GI number: 77457326
Start: 1271159
End: 1273861
Strand: Reverse
Name: glnD [H]
Synonym: Pfl01_1099
Alternate gene names: 77457326
Gene position: 1273861-1271159 (Counterclockwise)
Preceding gene: 77457327
Following gene: 77457325
Centisome position: 19.79
GC content: 62.3
Gene sequence:
>2703_bases ATGCCGCAGGTGGATCCCGAACTCTTCGACCGCGGCCAGTTCCAGGCTGAACTGGCCCTGAAAGCGAGTCCCATCGCGGC GTTCAAGAAGGCGATCCGCCAGGCCCGCGAAGTGCTCGATGCACGTTTTCGGGCCGGTCGCGACATCCGCCGGCTGATCG AAGACCGGGCGTGGTTCGTCGACAACATCCTGCAAAAGGCCTGGGACCAGTTCGACTGGAGCGAAGACGCCGACATCGCG CTGGTCGCGGTCGGCGGCTACGGTCGCGGTGAGCTGCACCCCTACTCCGACATCGATCTGCTGATCCTGCTGGACAGCGC CGACCACGAAATCTTCCGCGATTCCATCGAGCGCTTTCTGACGCTGCTGTGGGATATCGGCCTGGAAGTCGGTCAGAGCG TTCGCTCGGTCGACGAATGCGCCGAAGAGGCCCGCGCCGACCTGACGGTGGTCACCAACCTGATGGAAAGCCGCACCATC TGCGGCCCCGAGCGCCTGCGCCAGCGCATGCTCGATGTCACCAGCACTGCGCACATGTGGCCAAGCAAGGATTTCTTTCT GGCCAAGCGCGCCGAGCAGAAGGCTCGCCACCACAAGTACAACGACACCGAATACAACCTGGAACCCAACGTCAAAGGCT CGCCCGGCGGACTACGGGATATTCAGACAATTCTGTGGGTAGCCCGTCGTCAGTACGGCACCCTGAACCTGCGCGCCCTG GCCGGCGAAGGCTTTCTGGTCGAGAGTGAAAACGCCTTGCTCGCGTCCTCCCAGGAATTCCTCTGGAAGGTGCGTTACGC CCTGCACATGCTGGCCGGTCGCTCCGAGGACCGCCTGCTGTTCGATCACCAGCGCACCATTGCCGGGCTGCTGGGGTTTG AAGGCGACGACGCCAAACAGGCCGTCGAAAACTTCATGCAGCAGTATTTCCGGGTGGTGATGAGCATCGCCCAGCTCAGC GACCTGATCATTCAGCACTTCGAGGAAGTCATCCTCGCCCCGGAAGACGAAGCGCCGCCGCAGCCGATCAACTCGCGCTT CCAGCTGCACGACGGTTACATCGAGGCACGCAACGACAACGTGTTCCGCCGCACGCCGTTCGCCATGCTCGAGATCTTCG TGCTGATGGCCCAGCAGCCGGAAATCAAAGGCGTACGCGCCGACACCATTCGTCTGCTGCGGGAAAACCGTCACCTGATC GACGACAACTTCCGCAACGACATCCGCAACACCAGCCTGTTCATCGAGCTGTTCAAGTGCAAGATCGGCATCCACCGCAA CCTGCGGCGGATGAACCGTTACGGCATTCTCGGGCGCTATCTGCCGGAGTTCGGCTTCATCGTCGGGCAGATGCAGCACG ACCTGTTCCACATCTATACGGTCGATGCGCACACGCTGAACCTGATCAAACACCTGCGCAAGTTGCAGTACACCCAGGTG TCGGAGAAATTCCCGCTGGCCGCCAAGCTCATGGCCAAACTGCCGAAGCCTGAACTCATTTATATGGCCGGCCTGTACCA CGACATCGGCAAGGGCCGGCATGGCGATCACTCGGAAATTGGCGCAGTGGATGCCGAGGCGTTCTGCCAGCGCCACCAAC TGCCGGTGTGGGACAGCCGCCTGATCGTGTGGCTGGTGCAGAACCACCTGGTGATGTCGACCACCGCCCAGCGCAAGGAT TTGTCCGACCCGCAGGTGATCCATGACTTCGCCCTGGCGGTCGGTGACGAAACCCGTCTCGACTACCTGTACGTCCTGAC CGTGGCCGACATCAACGCGACCAACCCGACCCTCTGGAACTCGTGGCGTGCCAGCCTGTTGCGCCAGCTCTACACCGAAA CCAAGCGTGCCCTGCGCCGTGGCCTGGAGAATCCGGTGGATCGCGAAGAGCAGATCCGCCAGACCCAGAGCGCAGCGCTG GACATACTGGTACGCGGCGGCACCGATCCGGATGACGTCGAGCAATTGTGGGCGCAACTGGGCGATGACTACTTCCTGCG CCACACCGCCGGCGACGTGGCCTGGCACACCGACGCGATCCTTCAGCAACCGGCAGACGGCGGTCCGCTGGTGCTGATCA AGGAAACCACCCAGCGCGAATTCGAGGGCGGCACGCAGATCTTCATCTATGCGCCGGACCAACACGACTTCTTCGCCGTG ACCGTGGCCGCGATGGACCAGCTCAACCTGAACATTCACGACGCCCGGGTCATCACATCCAGCAGCCAGTTCACCCTCGA TACCTACATCGTGCTCGACACCGATGGCGACTCGATCGGCGACAATCCGGTCCGGGTCAAGCAGATTCGCGACGGCCTGA CCGAAGCCCTGCGCAACCCGGCCGACTACCCGACGATCATCCAGCGTCGAGTGCCGCGCCAGCTCAAGCATTTCGCATTC GCCCCGCAGGTGACGATCCACAACGATGCCCAGCGCCCGGTGACGGTGCTGGAACTCACGGCACCCGATCGCCCGGGCCT GCTGGCACGGGTCGGCGGGATTTTCCTCGAATTCGACCTGTCGCTGCAGAACGCCAAGATCGCCACCCTGGGCGAGCGGG TGGAAGACGTGTTCTTCATCACCGACGCCCACAATCAACCGCTGTCCGACCCGCTGCTGTGCAGCCGTTTGCAGGATGCC ATCGTCGAACAGCTGAGCGTCAATCAGGAACCCGATATCAAACTGTCGCGCATCAGCATTTGA
Upstream 100 bases:
>100_bases ACCGGCTACGAGATCTTCACCCTGCGCAGCGACGACACCATCCCGCGCATCTCGGCCTGACCCAGACACCGTTCCCAGCC TATAGAAGGAAAGCCAATCG
Downstream 100 bases:
>100_bases TTGCGCGCCCGGATTCAACCGCTTTGCACGAGATCCCGCACCGATGAACAACGCTCTGTCCCAGCTTCAGCCCTACCCGT TCGAAAAGCTCCGCGCCCTG
Product: PII uridylyl-transferase
Products: NA
Alternate protein names: PII uridylyl-transferase; UTase; Uridylyl-removing enzyme [H]
Number of amino acids: Translated: 900; Mature: 899
Protein sequence:
>900_residues MPQVDPELFDRGQFQAELALKASPIAAFKKAIRQAREVLDARFRAGRDIRRLIEDRAWFVDNILQKAWDQFDWSEDADIA LVAVGGYGRGELHPYSDIDLLILLDSADHEIFRDSIERFLTLLWDIGLEVGQSVRSVDECAEEARADLTVVTNLMESRTI CGPERLRQRMLDVTSTAHMWPSKDFFLAKRAEQKARHHKYNDTEYNLEPNVKGSPGGLRDIQTILWVARRQYGTLNLRAL AGEGFLVESENALLASSQEFLWKVRYALHMLAGRSEDRLLFDHQRTIAGLLGFEGDDAKQAVENFMQQYFRVVMSIAQLS DLIIQHFEEVILAPEDEAPPQPINSRFQLHDGYIEARNDNVFRRTPFAMLEIFVLMAQQPEIKGVRADTIRLLRENRHLI DDNFRNDIRNTSLFIELFKCKIGIHRNLRRMNRYGILGRYLPEFGFIVGQMQHDLFHIYTVDAHTLNLIKHLRKLQYTQV SEKFPLAAKLMAKLPKPELIYMAGLYHDIGKGRHGDHSEIGAVDAEAFCQRHQLPVWDSRLIVWLVQNHLVMSTTAQRKD LSDPQVIHDFALAVGDETRLDYLYVLTVADINATNPTLWNSWRASLLRQLYTETKRALRRGLENPVDREEQIRQTQSAAL DILVRGGTDPDDVEQLWAQLGDDYFLRHTAGDVAWHTDAILQQPADGGPLVLIKETTQREFEGGTQIFIYAPDQHDFFAV TVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSIGDNPVRVKQIRDGLTEALRNPADYPTIIQRRVPRQLKHFAF APQVTIHNDAQRPVTVLELTAPDRPGLLARVGGIFLEFDLSLQNAKIATLGERVEDVFFITDAHNQPLSDPLLCSRLQDA IVEQLSVNQEPDIKLSRISI
Sequences:
>Translated_900_residues MPQVDPELFDRGQFQAELALKASPIAAFKKAIRQAREVLDARFRAGRDIRRLIEDRAWFVDNILQKAWDQFDWSEDADIA LVAVGGYGRGELHPYSDIDLLILLDSADHEIFRDSIERFLTLLWDIGLEVGQSVRSVDECAEEARADLTVVTNLMESRTI CGPERLRQRMLDVTSTAHMWPSKDFFLAKRAEQKARHHKYNDTEYNLEPNVKGSPGGLRDIQTILWVARRQYGTLNLRAL AGEGFLVESENALLASSQEFLWKVRYALHMLAGRSEDRLLFDHQRTIAGLLGFEGDDAKQAVENFMQQYFRVVMSIAQLS DLIIQHFEEVILAPEDEAPPQPINSRFQLHDGYIEARNDNVFRRTPFAMLEIFVLMAQQPEIKGVRADTIRLLRENRHLI DDNFRNDIRNTSLFIELFKCKIGIHRNLRRMNRYGILGRYLPEFGFIVGQMQHDLFHIYTVDAHTLNLIKHLRKLQYTQV SEKFPLAAKLMAKLPKPELIYMAGLYHDIGKGRHGDHSEIGAVDAEAFCQRHQLPVWDSRLIVWLVQNHLVMSTTAQRKD LSDPQVIHDFALAVGDETRLDYLYVLTVADINATNPTLWNSWRASLLRQLYTETKRALRRGLENPVDREEQIRQTQSAAL DILVRGGTDPDDVEQLWAQLGDDYFLRHTAGDVAWHTDAILQQPADGGPLVLIKETTQREFEGGTQIFIYAPDQHDFFAV TVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSIGDNPVRVKQIRDGLTEALRNPADYPTIIQRRVPRQLKHFAF APQVTIHNDAQRPVTVLELTAPDRPGLLARVGGIFLEFDLSLQNAKIATLGERVEDVFFITDAHNQPLSDPLLCSRLQDA IVEQLSVNQEPDIKLSRISI >Mature_899_residues PQVDPELFDRGQFQAELALKASPIAAFKKAIRQAREVLDARFRAGRDIRRLIEDRAWFVDNILQKAWDQFDWSEDADIAL VAVGGYGRGELHPYSDIDLLILLDSADHEIFRDSIERFLTLLWDIGLEVGQSVRSVDECAEEARADLTVVTNLMESRTIC GPERLRQRMLDVTSTAHMWPSKDFFLAKRAEQKARHHKYNDTEYNLEPNVKGSPGGLRDIQTILWVARRQYGTLNLRALA GEGFLVESENALLASSQEFLWKVRYALHMLAGRSEDRLLFDHQRTIAGLLGFEGDDAKQAVENFMQQYFRVVMSIAQLSD LIIQHFEEVILAPEDEAPPQPINSRFQLHDGYIEARNDNVFRRTPFAMLEIFVLMAQQPEIKGVRADTIRLLRENRHLID DNFRNDIRNTSLFIELFKCKIGIHRNLRRMNRYGILGRYLPEFGFIVGQMQHDLFHIYTVDAHTLNLIKHLRKLQYTQVS EKFPLAAKLMAKLPKPELIYMAGLYHDIGKGRHGDHSEIGAVDAEAFCQRHQLPVWDSRLIVWLVQNHLVMSTTAQRKDL SDPQVIHDFALAVGDETRLDYLYVLTVADINATNPTLWNSWRASLLRQLYTETKRALRRGLENPVDREEQIRQTQSAALD ILVRGGTDPDDVEQLWAQLGDDYFLRHTAGDVAWHTDAILQQPADGGPLVLIKETTQREFEGGTQIFIYAPDQHDFFAVT VAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSIGDNPVRVKQIRDGLTEALRNPADYPTIIQRRVPRQLKHFAFA PQVTIHNDAQRPVTVLELTAPDRPGLLARVGGIFLEFDLSLQNAKIATLGERVEDVFFITDAHNQPLSDPLLCSRLQDAI VEQLSVNQEPDIKLSRISI
Specific function: Modifies, by uridylylation or deuridylylation the PII (glnB) regulatory protein [H]
COG id: COG2844
COG function: function code O; UTP:GlnB (protein PII) uridylyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glnD family [H]
Homologues:
Organism=Escherichia coli, GI1786363, Length=851, Percent_Identity=42.5381903642773, Blast_Score=677, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002912 - InterPro: IPR010043 - InterPro: IPR003607 - InterPro: IPR002934 - InterPro: IPR013546 [H]
Pfam domain/function: PF01842 ACT; PF08335 GlnD_UR_UTase; PF01909 NTP_transf_2 [H]
EC number: =2.7.7.59 [H]
Molecular weight: Translated: 102821; Mature: 102690
Theoretical pI: Translated: 5.60; Mature: 5.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQVDPELFDRGQFQAELALKASPIAAFKKAIRQAREVLDARFRAGRDIRRLIEDRAWFV CCCCCHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH DNILQKAWDQFDWSEDADIALVAVGGYGRGELHPYSDIDLLILLDSADHEIFRDSIERFL HHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHH TLLWDIGLEVGQSVRSVDECAEEARADLTVVTNLMESRTICGPERLRQRMLDVTSTAHMW HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC PSKDFFLAKRAEQKARHHKYNDTEYNLEPNVKGSPGGLRDIQTILWVARRQYGTLNLRAL CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEE AGEGFLVESENALLASSQEFLWKVRYALHMLAGRSEDRLLFDHQRTIAGLLGFEGDDAKQ ECCCEEEECCCCHHHCCHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHCCCCCCHHH AVENFMQQYFRVVMSIAQLSDLIIQHFEEVILAPEDEAPPQPINSRFQLHDGYIEARNDN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCEEEECCCC VFRRTPFAMLEIFVLMAQQPEIKGVRADTIRLLRENRHLIDDNFRNDIRNTSLFIELFKC CEECCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH KIGIHRNLRRMNRYGILGRYLPEFGFIVGQMQHDLFHIYTVDAHTLNLIKHLRKLQYTQV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECHHHHHHHHHHHHHHHHHH SEKFPLAAKLMAKLPKPELIYMAGLYHDIGKGRHGDHSEIGAVDAEAFCQRHQLPVWDSR HHCCCHHHHHHHHCCCCCEEEEHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCH LIVWLVQNHLVMSTTAQRKDLSDPQVIHDFALAVGDETRLDYLYVLTVADINATNPTLWN HEEEEHHCCEEEECCHHHCCCCCHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCCHHH SWRASLLRQLYTETKRALRRGLENPVDREEQIRQTQSAALDILVRGGTDPDDVEQLWAQL HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHC GDDYFLRHTAGDVAWHTDAILQQPADGGPLVLIKETTQREFEGGTQIFIYAPDQHDFFAV CCCEEEEECCCCCCCCCHHHHHCCCCCCCEEEEECCHHHHCCCCCEEEEEECCCCCEEEE TVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSIGDNPVRVKQIRDGLTEALRNP EEEHHHHCCCEEEEEEEEECCCCEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCC ADYPTIIQRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELTAPDRPGLLARVGGIFLEFDL CCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCEEEEEEECCCCCCHHHHHCCEEEEEEC SLQNAKIATLGERVEDVFFITDAHNQPLSDPLLCSRLQDAIVEQLSVNQEPDIKLSRISI CCCCCCHHHHHHHHCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECC >Mature Secondary Structure PQVDPELFDRGQFQAELALKASPIAAFKKAIRQAREVLDARFRAGRDIRRLIEDRAWFV CCCCHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH DNILQKAWDQFDWSEDADIALVAVGGYGRGELHPYSDIDLLILLDSADHEIFRDSIERFL HHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHH TLLWDIGLEVGQSVRSVDECAEEARADLTVVTNLMESRTICGPERLRQRMLDVTSTAHMW HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC PSKDFFLAKRAEQKARHHKYNDTEYNLEPNVKGSPGGLRDIQTILWVARRQYGTLNLRAL CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEE AGEGFLVESENALLASSQEFLWKVRYALHMLAGRSEDRLLFDHQRTIAGLLGFEGDDAKQ ECCCEEEECCCCHHHCCHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHCCCCCCHHH AVENFMQQYFRVVMSIAQLSDLIIQHFEEVILAPEDEAPPQPINSRFQLHDGYIEARNDN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCEEEECCCC VFRRTPFAMLEIFVLMAQQPEIKGVRADTIRLLRENRHLIDDNFRNDIRNTSLFIELFKC CEECCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH KIGIHRNLRRMNRYGILGRYLPEFGFIVGQMQHDLFHIYTVDAHTLNLIKHLRKLQYTQV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECHHHHHHHHHHHHHHHHHH SEKFPLAAKLMAKLPKPELIYMAGLYHDIGKGRHGDHSEIGAVDAEAFCQRHQLPVWDSR HHCCCHHHHHHHHCCCCCEEEEHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCH LIVWLVQNHLVMSTTAQRKDLSDPQVIHDFALAVGDETRLDYLYVLTVADINATNPTLWN HEEEEHHCCEEEECCHHHCCCCCHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCCHHH SWRASLLRQLYTETKRALRRGLENPVDREEQIRQTQSAALDILVRGGTDPDDVEQLWAQL HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHC GDDYFLRHTAGDVAWHTDAILQQPADGGPLVLIKETTQREFEGGTQIFIYAPDQHDFFAV CCCEEEEECCCCCCCCCHHHHHCCCCCCCEEEEECCHHHHCCCCCEEEEEECCCCCEEEE TVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSIGDNPVRVKQIRDGLTEALRNP EEEHHHHCCCEEEEEEEEECCCCEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCC ADYPTIIQRRVPRQLKHFAFAPQVTIHNDAQRPVTVLELTAPDRPGLLARVGGIFLEFDL CCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCEEEEEEECCCCCCHHHHHCCEEEEEEC SLQNAKIATLGERVEDVFFITDAHNQPLSDPLLCSRLQDAIVEQLSVNQEPDIKLSRISI CCCCCCHHHHHHHHCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA