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The map label for this gene is ypjD [H]

Identifier: 77457244

GI number: 77457244

Start: 1181799

End: 1182611

Strand: Reverse

Name: ypjD [H]

Synonym: Pfl01_1017

Alternate gene names: 77457244

Gene position: 1182611-1181799 (Counterclockwise)

Preceding gene: 77457251

Following gene: 77457243

Centisome position: 18.37

GC content: 63.47

Gene sequence:

>813_bases
ATGCTCCCCTTGTCACCGAGTTTGCTGACCACCCTCGCCGCCGCCCTTCTCTACGCCGCTGCGACTCTCTATCAGGGCAC
CCGCCTGGCCACCGGCGCCAAGACCAACAAGCGCCTGCTGGTCTCGCTCGGCGTCCTCGCCGTGCTGGCCCACAGCGCCA
GCCTGCTTACGCATTTATTGACGCCGATCGGTCTGGGCCTGGATTTCTTCAGCGCTTCGAGCCTGATTGCTGCGGCCGTC
ATCGCCCTGACCCTGCTGGCCTGCTCGCGGATCCCGGTGGAAAACCTGCTGGTGCTGCTGTTCCCGCTGGGTGCGATCAC
CGTACTGCTGGCGCAGTTCGCGCCGGCCGGCACGGTGCAGATCATCGACGAGGAACCGGGCATCCTCGCGCACATCCTGT
TGTCGATCCTCGCCTACGGCATGTTCACCATCGCGGTGTTCCAGGCCCTGTTGCTGCTGGTGCAGGATCATCAGCTCAAG
CACAAGCATCCGTCCGGACTGATCAAGAACTTCCCCCCGCTGCAAACCATGGAAAGCCTGCTGTTCGGCTTCCTCTGGGC
CGGCTGGACGCTGCTGTCGCTGTCGCTGATTTCCGGCTGGCTGTTCGTCGAGAACCTGTTTGCCCAGCACCTGGTGCATA
AAACCCTGCTGGCCTGCCTGGCCTGGGTCGTGTTCAGCGTCCTGCTGTGGGGCCGTAACCGCCTCGGCTGGCGCGGCCAC
AAGGCAATCCGCTGGACCCTCGCCGGTTTCTGCCTGCTGATGCTCGCGTACTTCGGCAGCAAACTGGTTCGTGAATACAT
CCTGCACATCTGA

Upstream 100 bases:

>100_bases
ACTGCGACTGGCGGACACCTCGCTGTCAGCTTGCCGGTCTTTCGTGCAACGGCGGTTCTATGCCAAACTCAGCCCCTTTC
GGGCTTGCCTAACAGGATTT

Downstream 100 bases:

>100_bases
CGGGCGGCATAAATGGACGGTTTGCCCATAGGGCCGATGCTCGCGGTATTTGCCCTGCTGATTCTCTGGTCGGGGCTGTT
TACCGCCGTCGAAGCGGCGC

Product: cytochrome c assembly protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 270; Mature: 270

Protein sequence:

>270_residues
MLPLSPSLLTTLAAALLYAAATLYQGTRLATGAKTNKRLLVSLGVLAVLAHSASLLTHLLTPIGLGLDFFSASSLIAAAV
IALTLLACSRIPVENLLVLLFPLGAITVLLAQFAPAGTVQIIDEEPGILAHILLSILAYGMFTIAVFQALLLLVQDHQLK
HKHPSGLIKNFPPLQTMESLLFGFLWAGWTLLSLSLISGWLFVENLFAQHLVHKTLLACLAWVVFSVLLWGRNRLGWRGH
KAIRWTLAGFCLLMLAYFGSKLVREYILHI

Sequences:

>Translated_270_residues
MLPLSPSLLTTLAAALLYAAATLYQGTRLATGAKTNKRLLVSLGVLAVLAHSASLLTHLLTPIGLGLDFFSASSLIAAAV
IALTLLACSRIPVENLLVLLFPLGAITVLLAQFAPAGTVQIIDEEPGILAHILLSILAYGMFTIAVFQALLLLVQDHQLK
HKHPSGLIKNFPPLQTMESLLFGFLWAGWTLLSLSLISGWLFVENLFAQHLVHKTLLACLAWVVFSVLLWGRNRLGWRGH
KAIRWTLAGFCLLMLAYFGSKLVREYILHI
>Mature_270_residues
MLPLSPSLLTTLAAALLYAAATLYQGTRLATGAKTNKRLLVSLGVLAVLAHSASLLTHLLTPIGLGLDFFSASSLIAAAV
IALTLLACSRIPVENLLVLLFPLGAITVLLAQFAPAGTVQIIDEEPGILAHILLSILAYGMFTIAVFQALLLLVQDHQLK
HKHPSGLIKNFPPLQTMESLLFGFLWAGWTLLSLSLISGWLFVENLFAQHLVHKTLLACLAWVVFSVLLWGRNRLGWRGH
KAIRWTLAGFCLLMLAYFGSKLVREYILHI

Specific function: Unknown

COG id: COG4137

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI145693174, Length=233, Percent_Identity=32.618025751073, Blast_Score=111, Evalue=4e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002541 [H]

Pfam domain/function: PF01578 Cytochrom_C_asm [H]

EC number: NA

Molecular weight: Translated: 29404; Mature: 29404

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPLSPSLLTTLAAALLYAAATLYQGTRLATGAKTNKRLLVSLGVLAVLAHSASLLTHLL
CCCCCHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
TPIGLGLDFFSASSLIAAAVIALTLLACSRIPVENLLVLLFPLGAITVLLAQFAPAGTVQ
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEE
IIDEEPGILAHILLSILAYGMFTIAVFQALLLLVQDHQLKHKHPSGLIKNFPPLQTMESL
EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCHHHHHHH
LFGFLWAGWTLLSLSLISGWLFVENLFAQHLVHKTLLACLAWVVFSVLLWGRNRLGWRGH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
KAIRWTLAGFCLLMLAYFGSKLVREYILHI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLPLSPSLLTTLAAALLYAAATLYQGTRLATGAKTNKRLLVSLGVLAVLAHSASLLTHLL
CCCCCHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
TPIGLGLDFFSASSLIAAAVIALTLLACSRIPVENLLVLLFPLGAITVLLAQFAPAGTVQ
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEE
IIDEEPGILAHILLSILAYGMFTIAVFQALLLLVQDHQLKHKHPSGLIKNFPPLQTMESL
EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCHHHHHHH
LFGFLWAGWTLLSLSLISGWLFVENLFAQHLVHKTLLACLAWVVFSVLLWGRNRLGWRGH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
KAIRWTLAGFCLLMLAYFGSKLVREYILHI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]