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The map label for this gene is yfjD [C]

Identifier: 77457243

GI number: 77457243

Start: 1180545

End: 1181786

Strand: Reverse

Name: yfjD [C]

Synonym: Pfl01_1016

Alternate gene names: 77457243

Gene position: 1181786-1180545 (Counterclockwise)

Preceding gene: 77457244

Following gene: 77457242

Centisome position: 18.36

GC content: 61.84

Gene sequence:

>1242_bases
ATGGACGGTTTGCCCATAGGGCCGATGCTCGCGGTATTTGCCCTGCTGATTCTCTGGTCGGGGCTGTTTACCGCCGTCGA
AGCGGCGCAGCAGTATCTGCTCGCGCAACGCACCGCATCCCGCGCCAGCGACAAGCCGCTGGCGAAGCTCAACTTCCCGC
TCGACAGCCTGATCCTCTGCAATACCCTGTGCCGCGCCCTCGCCGTCATTCTGGCCACCCTGCTGGCAATCTTTCTCTGT
GAAGAAAATGGCCCCTGGGCCGCCTGCCTCGGCGCCGGTGCCTTGCTGCTGGTTTTTGCCGACTATTTCCCCCGCGCCCT
CGCCCAGCGTTATCCGGATGCGGTGCTGTCGTTCGGCAATACGCTGCTGGCAGTACCGCTGAAAGTGGTTTACCCGCTTG
CCTGGCTACTCAGCCGCACCAGTGGTTTGCTAATGCAACCGTTCATCCGCAAGGCCCAGGTGGTGCAACAGAGCGAAGAC
GATGTGCCGGCGGAGCGTCATGACGACCCGGATCATCCGGTGCGCCCGCACCCGGTTTCAGGCATCCATGCGCTGGACAA
CATCACGGTCAACGACATTCTGGTGCCGCGCAGCGATGTCGACGGCATCAACCTCGACGACCCGATCGAGGAAATCATCG
AGCAATTACGCAAGAACCAACGCACTCGCCTGCCGGTTTTCCACAGCGATATCAATCAGGTCGAAGCGGTGCTCAATACC
CGGCAGATTCGTCACCTGCTCGACAACGGCAGCCTGACCCGCGAAGCCTTGCTGGCGGCCAGTTACGAGCCGTATTTCGT
CCCTGAAAGCACCCCGCTGCAACTGCAACTGCTGAACTTCCACAAGCAGCAACGGCGTCTGGGCATGGTGGTGGACGAAT
ACGGCGAAGTGCTCGGCATCGTCACCCTGGAAGACATTCTCGAAGAAATCGTCGGCGAATTCGAAAGCGAGCACAGCCTC
GACAATCCGCACATCCACCCGCAGGCCGATGGCCGCATGGTGATCGATGGCGCGGCGTCGATCCGCGAACTGAACAAATG
CCTGGGCTGGCACCTGCCCAGCGACGGCCCCCGGACCCTCAATGGCCTGGTGACCGAAGCGCTGGAAACCATCCCGGAAA
GCGCGGTCTGCCTGAAGATCGGCCGCTACCGGCTGGAGATTCTCGAAACCGAAGAGAACCGGGTCAGCAAGGTCCTGATC
TGGCACACCACTTCGGCCCCGACGCTGGCCACGGCCCGCTAG

Upstream 100 bases:

>100_bases
AATCCGCTGGACCCTCGCCGGTTTCTGCCTGCTGATGCTCGCGTACTTCGGCAGCAAACTGGTTCGTGAATACATCCTGC
ACATCTGACGGGCGGCATAA

Downstream 100 bases:

>100_bases
CCAGCCCCTTGTTCAATCGTTAGCCACCTTCCTATAATCGCGGTGCTCACCCAAGCCCCGCCGAACCGTGTGCTTACCCC
GCACCCGACAAGTTCCGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 413; Mature: 413

Protein sequence:

>413_residues
MDGLPIGPMLAVFALLILWSGLFTAVEAAQQYLLAQRTASRASDKPLAKLNFPLDSLILCNTLCRALAVILATLLAIFLC
EENGPWAACLGAGALLLVFADYFPRALAQRYPDAVLSFGNTLLAVPLKVVYPLAWLLSRTSGLLMQPFIRKAQVVQQSED
DVPAERHDDPDHPVRPHPVSGIHALDNITVNDILVPRSDVDGINLDDPIEEIIEQLRKNQRTRLPVFHSDINQVEAVLNT
RQIRHLLDNGSLTREALLAASYEPYFVPESTPLQLQLLNFHKQQRRLGMVVDEYGEVLGIVTLEDILEEIVGEFESEHSL
DNPHIHPQADGRMVIDGAASIRELNKCLGWHLPSDGPRTLNGLVTEALETIPESAVCLKIGRYRLEILETEENRVSKVLI
WHTTSAPTLATAR

Sequences:

>Translated_413_residues
MDGLPIGPMLAVFALLILWSGLFTAVEAAQQYLLAQRTASRASDKPLAKLNFPLDSLILCNTLCRALAVILATLLAIFLC
EENGPWAACLGAGALLLVFADYFPRALAQRYPDAVLSFGNTLLAVPLKVVYPLAWLLSRTSGLLMQPFIRKAQVVQQSED
DVPAERHDDPDHPVRPHPVSGIHALDNITVNDILVPRSDVDGINLDDPIEEIIEQLRKNQRTRLPVFHSDINQVEAVLNT
RQIRHLLDNGSLTREALLAASYEPYFVPESTPLQLQLLNFHKQQRRLGMVVDEYGEVLGIVTLEDILEEIVGEFESEHSL
DNPHIHPQADGRMVIDGAASIRELNKCLGWHLPSDGPRTLNGLVTEALETIPESAVCLKIGRYRLEILETEENRVSKVLI
WHTTSAPTLATAR
>Mature_413_residues
MDGLPIGPMLAVFALLILWSGLFTAVEAAQQYLLAQRTASRASDKPLAKLNFPLDSLILCNTLCRALAVILATLLAIFLC
EENGPWAACLGAGALLLVFADYFPRALAQRYPDAVLSFGNTLLAVPLKVVYPLAWLLSRTSGLLMQPFIRKAQVVQQSED
DVPAERHDDPDHPVRPHPVSGIHALDNITVNDILVPRSDVDGINLDDPIEEIIEQLRKNQRTRLPVFHSDINQVEAVLNT
RQIRHLLDNGSLTREALLAASYEPYFVPESTPLQLQLLNFHKQQRRLGMVVDEYGEVLGIVTLEDILEEIVGEFESEHSL
DNPHIHPQADGRMVIDGAASIRELNKCLGWHLPSDGPRTLNGLVTEALETIPESAVCLKIGRYRLEILETEENRVSKVLI
WHTTSAPTLATAR

Specific function: Unknown

COG id: COG4536

COG function: function code P; Putative Mg2+ and Co2+ transporter CorB

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=311, Percent_Identity=23.7942122186495, Blast_Score=75, Evalue=1e-13,
Organism=Escherichia coli, GI145693175, Length=397, Percent_Identity=33.7531486146096, Blast_Score=229, Evalue=2e-61,
Organism=Escherichia coli, GI87082033, Length=223, Percent_Identity=35.8744394618834, Blast_Score=100, Evalue=3e-22,
Organism=Escherichia coli, GI1786879, Length=232, Percent_Identity=25.8620689655172, Blast_Score=85, Evalue=9e-18,
Organism=Escherichia coli, GI1790664, Length=326, Percent_Identity=20.8588957055215, Blast_Score=75, Evalue=7e-15,
Organism=Escherichia coli, GI1788119, Length=254, Percent_Identity=25.5905511811024, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016169
- InterPro:   IPR000644
- InterPro:   IPR002550
- InterPro:   IPR005170 [H]

Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC; PF01595 DUF21 [H]

EC number: NA

Molecular weight: Translated: 45798; Mature: 45798

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDGLPIGPMLAVFALLILWSGLFTAVEAAQQYLLAQRTASRASDKPLAKLNFPLDSLILC
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHH
NTLCRALAVILATLLAIFLCEENGPWAACLGAGALLLVFADYFPRALAQRYPDAVLSFGN
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCC
TLLAVPLKVVYPLAWLLSRTSGLLMQPFIRKAQVVQQSEDDVPAERHDDPDHPVRPHPVS
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
GIHALDNITVNDILVPRSDVDGINLDDPIEEIIEQLRKNQRTRLPVFHSDINQVEAVLNT
CHHHHCCCEECCEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
RQIRHLLDNGSLTREALLAASYEPYFVPESTPLQLQLLNFHKQQRRLGMVVDEYGEVLGI
HHHHHHHHCCCHHHHHHHHHCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VTLEDILEEIVGEFESEHSLDNPHIHPQADGRMVIDGAASIRELNKCLGWHLPSDGPRTL
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHCCCCCCCCCHHH
NGLVTEALETIPESAVCLKIGRYRLEILETEENRVSKVLIWHTTSAPTLATAR
HHHHHHHHHHCCCHHHHHHHHHHHEEEEECCCCCEEEEEEEECCCCCCCCCCC
>Mature Secondary Structure
MDGLPIGPMLAVFALLILWSGLFTAVEAAQQYLLAQRTASRASDKPLAKLNFPLDSLILC
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHH
NTLCRALAVILATLLAIFLCEENGPWAACLGAGALLLVFADYFPRALAQRYPDAVLSFGN
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCC
TLLAVPLKVVYPLAWLLSRTSGLLMQPFIRKAQVVQQSEDDVPAERHDDPDHPVRPHPVS
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
GIHALDNITVNDILVPRSDVDGINLDDPIEEIIEQLRKNQRTRLPVFHSDINQVEAVLNT
CHHHHCCCEECCEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
RQIRHLLDNGSLTREALLAASYEPYFVPESTPLQLQLLNFHKQQRRLGMVVDEYGEVLGI
HHHHHHHHCCCHHHHHHHHHCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VTLEDILEEIVGEFESEHSLDNPHIHPQADGRMVIDGAASIRELNKCLGWHLPSDGPRTL
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHCCCCCCCCCHHH
NGLVTEALETIPESAVCLKIGRYRLEILETEENRVSKVLIWHTTSAPTLATAR
HHHHHHHHHHCCCHHHHHHHHHHHEEEEECCCCCEEEEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]