| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77457129
Identifier: 77457129
GI number: 77457129
Start: 1044701
End: 1045603
Strand: Direct
Name: 77457129
Synonym: Pfl01_0902
Alternate gene names: NA
Gene position: 1044701-1045603 (Clockwise)
Preceding gene: 77457128
Following gene: 77457130
Centisome position: 16.23
GC content: 62.24
Gene sequence:
>903_bases ATGCCTCTCGCCGAGATCCCTCTGAGTGCCTGGCGCAAACGCAGCCAGACGTTTGTCTTCCGTGGTCAGCCGATCCGCTA CTGGACGGCCGGGCAGGGCGAACCGCTGCTGCTGATCCATGGCTTTCCGACGGCCAGCTGGGACTGGCATTACCTGTGGC AACCGCTGTCCCAGCGCTACCGGGTGATTGCCTGCGACATGCTCGGCTTCGGCGACTCGGCCAAACCCCTGAATCACACT TACAGCCTGCTGGAGCAGGCCGATCTGCAACAGGCCTTGCTGGCGCATCTGCAGGTCGAGCAACCGGTGCACATTCTGGC CCACGACTACGGCGACAGTGTTGCCCAGGAACTGCTGGCCCGGCATTACGAAGATCGGATCGAGGTCGCCAGTTGCGTAT TCCTCAACGGTGGTCTGTTCCCGGAAACCCATCGGCCGCTGCTGGCGCAAAAGCTGCTGCTAAGCCCTTTGGGCTGGATG ATCGGCCGGGCATTCACCCGCGATGCGCTGGTGAAGAGTTTCCAGCAGATTTTCGGCCCGGACACTCGGCCCAGTGAAAG CGAGATGGATGATTTCTGGAGCCTGATCGAATGCAATCGCGGGCCGCGGGTCATGCACAAGCTGATTCACTACATTCCCG AACGCCGGGTGCAGCGTGATCGCTGGGTCGCTTCGATGCAGCGCGGCGAGGTGCCGCTGCGGGTGATCGATGGCGAAGTC GATCCGATATCCGGGGCGCACATGGTCGAGCGCTATCGTGCGCTGATCCCCGACGCCGACACGGTGCTGTTGCCGGGCAT CGGTCACTACCCGCAAATAGAAGCGCCGGTGCAGGTGCTCAGGCACTACCTCGAATTTCGCGATCACTTCGTGCTGCCTC CGCGCAAGGTAGCGTGTTCCTGA
Upstream 100 bases:
>100_bases TCGCCGGCGTCACCAAAAGTGCTCAAGGCATGGGTGGCGCGCTGGCCTGGCCGGCGCTGCTGCGCAAACTCGATAAACAA GACCCCGGGTATAAACTCTA
Downstream 100 bases:
>100_bases GTTCGTGCCGAACGCGCTTGGCGCCTCGGCACGTTTTCATCATCCTTCAGCCTTATCGCGCACCATTCAGCCCCAGCCGT GTTCGTTGTGACCGCACGCT
Product: alpha/beta hydrolase fold protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 300; Mature: 299
Protein sequence:
>300_residues MPLAEIPLSAWRKRSQTFVFRGQPIRYWTAGQGEPLLLIHGFPTASWDWHYLWQPLSQRYRVIACDMLGFGDSAKPLNHT YSLLEQADLQQALLAHLQVEQPVHILAHDYGDSVAQELLARHYEDRIEVASCVFLNGGLFPETHRPLLAQKLLLSPLGWM IGRAFTRDALVKSFQQIFGPDTRPSESEMDDFWSLIECNRGPRVMHKLIHYIPERRVQRDRWVASMQRGEVPLRVIDGEV DPISGAHMVERYRALIPDADTVLLPGIGHYPQIEAPVQVLRHYLEFRDHFVLPPRKVACS
Sequences:
>Translated_300_residues MPLAEIPLSAWRKRSQTFVFRGQPIRYWTAGQGEPLLLIHGFPTASWDWHYLWQPLSQRYRVIACDMLGFGDSAKPLNHT YSLLEQADLQQALLAHLQVEQPVHILAHDYGDSVAQELLARHYEDRIEVASCVFLNGGLFPETHRPLLAQKLLLSPLGWM IGRAFTRDALVKSFQQIFGPDTRPSESEMDDFWSLIECNRGPRVMHKLIHYIPERRVQRDRWVASMQRGEVPLRVIDGEV DPISGAHMVERYRALIPDADTVLLPGIGHYPQIEAPVQVLRHYLEFRDHFVLPPRKVACS >Mature_299_residues PLAEIPLSAWRKRSQTFVFRGQPIRYWTAGQGEPLLLIHGFPTASWDWHYLWQPLSQRYRVIACDMLGFGDSAKPLNHTY SLLEQADLQQALLAHLQVEQPVHILAHDYGDSVAQELLARHYEDRIEVASCVFLNGGLFPETHRPLLAQKLLLSPLGWMI GRAFTRDALVKSFQQIFGPDTRPSESEMDDFWSLIECNRGPRVMHKLIHYIPERRVQRDRWVASMQRGEVPLRVIDGEVD PISGAHMVERYRALIPDADTVLLPGIGHYPQIEAPVQVLRHYLEFRDHFVLPPRKVACS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AB hydrolase superfamily [H]
Homologues:
Organism=Homo sapiens, GI29294639, Length=299, Percent_Identity=41.1371237458194, Blast_Score=215, Evalue=4e-56, Organism=Homo sapiens, GI29294637, Length=299, Percent_Identity=41.1371237458194, Blast_Score=215, Evalue=4e-56, Organism=Homo sapiens, GI29294635, Length=299, Percent_Identity=41.1371237458194, Blast_Score=215, Evalue=4e-56,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR000639 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: NA
Molecular weight: Translated: 34524; Mature: 34393
Theoretical pI: Translated: 7.04; Mature: 7.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLAEIPLSAWRKRSQTFVFRGQPIRYWTAGQGEPLLLIHGFPTASWDWHYLWQPLSQRY CCCCCCCHHHHHCCCCEEEEECCCEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHCCC RVIACDMLGFGDSAKPLNHTYSLLEQADLQQALLAHLQVEQPVHILAHDYGDSVAQELLA EEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH RHYEDRIEVASCVFLNGGLFPETHRPLLAQKLLLSPLGWMIGRAFTRDALVKSFQQIFGP HHHHHHHHHHHEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DTRPSESEMDDFWSLIECNRGPRVMHKLIHYIPERRVQRDRWVASMQRGEVPLRVIDGEV CCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCC DPISGAHMVERYRALIPDADTVLLPGIGHYPQIEAPVQVLRHYLEFRDHFVLPPRKVACS CCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHCCC >Mature Secondary Structure PLAEIPLSAWRKRSQTFVFRGQPIRYWTAGQGEPLLLIHGFPTASWDWHYLWQPLSQRY CCCCCCHHHHHCCCCEEEEECCCEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHCCC RVIACDMLGFGDSAKPLNHTYSLLEQADLQQALLAHLQVEQPVHILAHDYGDSVAQELLA EEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH RHYEDRIEVASCVFLNGGLFPETHRPLLAQKLLLSPLGWMIGRAFTRDALVKSFQQIFGP HHHHHHHHHHHEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DTRPSESEMDDFWSLIECNRGPRVMHKLIHYIPERRVQRDRWVASMQRGEVPLRVIDGEV CCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCC DPISGAHMVERYRALIPDADTVLLPGIGHYPQIEAPVQVLRHYLEFRDHFVLPPRKVACS CCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]