| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is hisD [H]
Identifier: 77457098
GI number: 77457098
Start: 1016337
End: 1017662
Strand: Direct
Name: hisD [H]
Synonym: Pfl01_0871
Alternate gene names: 77457098
Gene position: 1016337-1017662 (Clockwise)
Preceding gene: 77457097
Following gene: 77457099
Centisome position: 15.79
GC content: 63.95
Gene sequence:
>1326_bases ATGACCGCACCGACTGCAATTCGCCGACTCAACGCTGCTGACCCGGATTTCGCGCATCATCTGGATCATCTGCTGAGCTG GGAAAGTGTGTCTGACGACTCGGTCAATCAGCGGGTGCTGGACATCATCAAGGCTGTGCGCGAGCGCGGTGACGCGGCGC TGGTCGAGTTCACCCAGAAATTCGACGGCCTCGAAGTCGCCTCCATGGCAGACCTGATCCTGCCGCGCGAGCGTCTGGAA CTGGCCCTGACCCGTATCACCGTGGCTCAACGCGAAGCGCTGGAAAAAGCCGCCGCCCGTGTGCGCAGCTATCACGAAAA ACAGAAGCAGGACTCCTGGAGCTACACCGAAGCCGACGGCACCGTGCTGGGCCAGAAGGTCACGCCGCTGGATCGCGCCG GTCTGTATGTGCCGGGCGGCAAGGCGTCGTACCCGTCGTCGGTGTTGATGAATGCGATTCCGGCCAAGGTCGCTGGCGTG ACTGAAGTGGTCATGGTGGTGCCAACCCCGCGTGGCGAGGTCAACGAACTGGTGCTGGCGGCGGCGTGCATTGCCGGCGT CGACCGGGTGTTCACCATCGGTGGCGCACAAGCCGTTGCTGCGTTGGCCTATGGCACCGAAAGCGTGCCGCAGGTGGACA AGGTCGTCGGCCCGGGCAACATCTATGTCGCCACTGCCAAGCGTCACGTGTTCGGTCAGGTCGGCATCGACATGATTGCC GGCCCGTCTGAAATCCTCGTGGTGTGCGACGGCCAGACCGATCCGGACTGGATCGCCATGGACCTGTTCTCCCAGGCCGA ACACGACGAAGACGCCCAGGCGATTCTGGTCAGCCCGGACGCCGAGTTCCTCGACAAGGTCGCCGCGAGCATCGACAAGC TGCTGCCGACCATGGATCGCGCAACCATCATCGAAACCTCGATCAACGGCCGTGGTGCCCTGATTCACGTGCGCGACATG GCCCAGGCCATCGAAGTCGCCAACCGCATTGCCCCGGAACACCTTGAGCTGTCGGTCGCCGACCCTCAGGCCTGGCTGCC GCAGATCCGCCACGCCGGCGCGATTTTCATGGGCCGCCACACCTCCGAGGCGCTGGGCGACTACTGCGCGGGTCCGAACC ACGTGCTGCCGACCTCCGGCACTGCGCGTTTCTCTTCGCCGCTGGGCGTGTACGACTTCCAGAAACGCTCGTCGATCATC TTCTGCTCCGAGGCCGGCGCTTCGGAGCTTGGCAAGACTGCATCGATTCTGGCCCGTGGCGAATCGCTGAGCGCCCACGC GCGTAGCGCCGAATACCGCATCAAAGACGACGTGAAGGGGAACTGA
Upstream 100 bases:
>100_bases CCCGTCTATCCGCCTCATAGCCAGAATCTCAGGTGCCCAAGCGGAAACGACTGCTAAGTTAGGGCGCCTGAGTTTTTGCC ATTCCTATGAGGCTCTCGCT
Downstream 100 bases:
>100_bases ACATGAGCAAATTCTGGAGCCCGTTCGTCAAGGATCTGGTGCCTTACGTGCCGGGCGAGCAGCCGAAGTTGACCCGTCTG GTCAAACTCAATACCAACGA
Product: histidinol dehydrogenase
Products: NA
Alternate protein names: HDH [H]
Number of amino acids: Translated: 441; Mature: 440
Protein sequence:
>441_residues MTAPTAIRRLNAADPDFAHHLDHLLSWESVSDDSVNQRVLDIIKAVRERGDAALVEFTQKFDGLEVASMADLILPRERLE LALTRITVAQREALEKAAARVRSYHEKQKQDSWSYTEADGTVLGQKVTPLDRAGLYVPGGKASYPSSVLMNAIPAKVAGV TEVVMVVPTPRGEVNELVLAAACIAGVDRVFTIGGAQAVAALAYGTESVPQVDKVVGPGNIYVATAKRHVFGQVGIDMIA GPSEILVVCDGQTDPDWIAMDLFSQAEHDEDAQAILVSPDAEFLDKVAASIDKLLPTMDRATIIETSINGRGALIHVRDM AQAIEVANRIAPEHLELSVADPQAWLPQIRHAGAIFMGRHTSEALGDYCAGPNHVLPTSGTARFSSPLGVYDFQKRSSII FCSEAGASELGKTASILARGESLSAHARSAEYRIKDDVKGN
Sequences:
>Translated_441_residues MTAPTAIRRLNAADPDFAHHLDHLLSWESVSDDSVNQRVLDIIKAVRERGDAALVEFTQKFDGLEVASMADLILPRERLE LALTRITVAQREALEKAAARVRSYHEKQKQDSWSYTEADGTVLGQKVTPLDRAGLYVPGGKASYPSSVLMNAIPAKVAGV TEVVMVVPTPRGEVNELVLAAACIAGVDRVFTIGGAQAVAALAYGTESVPQVDKVVGPGNIYVATAKRHVFGQVGIDMIA GPSEILVVCDGQTDPDWIAMDLFSQAEHDEDAQAILVSPDAEFLDKVAASIDKLLPTMDRATIIETSINGRGALIHVRDM AQAIEVANRIAPEHLELSVADPQAWLPQIRHAGAIFMGRHTSEALGDYCAGPNHVLPTSGTARFSSPLGVYDFQKRSSII FCSEAGASELGKTASILARGESLSAHARSAEYRIKDDVKGN >Mature_440_residues TAPTAIRRLNAADPDFAHHLDHLLSWESVSDDSVNQRVLDIIKAVRERGDAALVEFTQKFDGLEVASMADLILPRERLEL ALTRITVAQREALEKAAARVRSYHEKQKQDSWSYTEADGTVLGQKVTPLDRAGLYVPGGKASYPSSVLMNAIPAKVAGVT EVVMVVPTPRGEVNELVLAAACIAGVDRVFTIGGAQAVAALAYGTESVPQVDKVVGPGNIYVATAKRHVFGQVGIDMIAG PSEILVVCDGQTDPDWIAMDLFSQAEHDEDAQAILVSPDAEFLDKVAASIDKLLPTMDRATIIETSINGRGALIHVRDMA QAIEVANRIAPEHLELSVADPQAWLPQIRHAGAIFMGRHTSEALGDYCAGPNHVLPTSGTARFSSPLGVYDFQKRSSIIF CSEAGASELGKTASILARGESLSAHARSAEYRIKDDVKGN
Specific function: Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine [H]
COG id: COG0141
COG function: function code E; Histidinol dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the histidinol dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1788331, Length=422, Percent_Identity=39.3364928909953, Blast_Score=291, Evalue=7e-80, Organism=Saccharomyces cerevisiae, GI6319819, Length=404, Percent_Identity=36.1386138613861, Blast_Score=247, Evalue=3e-66,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016161 - InterPro: IPR022695 - InterPro: IPR001692 - InterPro: IPR012131 [H]
Pfam domain/function: PF00815 Histidinol_dh [H]
EC number: =1.1.1.23 [H]
Molecular weight: Translated: 47306; Mature: 47175
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: PS00611 HISOL_DEHYDROGENASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAPTAIRRLNAADPDFAHHLDHLLSWESVSDDSVNQRVLDIIKAVRERGDAALVEFTQK CCCCHHHHHCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHH FDGLEVASMADLILPRERLELALTRITVAQREALEKAAARVRSYHEKQKQDSWSYTEADG CCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCC TVLGQKVTPLDRAGLYVPGGKASYPSSVLMNAIPAKVAGVTEVVMVVPTPRGEVNELVLA CEECCCCCCHHHCCEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHH AACIAGVDRVFTIGGAQAVAALAYGTESVPQVDKVVGPGNIYVATAKRHVFGQVGIDMIA HHHHHCCHHEEEECCHHHHHHHHHCCCCCCCHHHHCCCCCEEEEECCHHHHHHCCHHEEC GPSEILVVCDGQTDPDWIAMDLFSQAEHDEDAQAILVSPDAEFLDKVAASIDKLLPTMDR CCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCC ATIIETSINGRGALIHVRDMAQAIEVANRIAPEHLELSVADPQAWLPQIRHAGAIFMGRH CEEEEECCCCCEEEEEHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHCCEEEEECC TSEALGDYCAGPNHVLPTSGTARFSSPLGVYDFQKRSSIIFCSEAGASELGKTASILARG CHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHCCHHHHHHCC ESLSAHARSAEYRIKDDVKGN CCCHHHHCCCCEEECCCCCCC >Mature Secondary Structure TAPTAIRRLNAADPDFAHHLDHLLSWESVSDDSVNQRVLDIIKAVRERGDAALVEFTQK CCCHHHHHCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHH FDGLEVASMADLILPRERLELALTRITVAQREALEKAAARVRSYHEKQKQDSWSYTEADG CCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCC TVLGQKVTPLDRAGLYVPGGKASYPSSVLMNAIPAKVAGVTEVVMVVPTPRGEVNELVLA CEECCCCCCHHHCCEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHH AACIAGVDRVFTIGGAQAVAALAYGTESVPQVDKVVGPGNIYVATAKRHVFGQVGIDMIA HHHHHCCHHEEEECCHHHHHHHHHCCCCCCCHHHHCCCCCEEEEECCHHHHHHCCHHEEC GPSEILVVCDGQTDPDWIAMDLFSQAEHDEDAQAILVSPDAEFLDKVAASIDKLLPTMDR CCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCC ATIIETSINGRGALIHVRDMAQAIEVANRIAPEHLELSVADPQAWLPQIRHAGAIFMGRH CEEEEECCCCCEEEEEHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHCCEEEEECC TSEALGDYCAGPNHVLPTSGTARFSSPLGVYDFQKRSSIIFCSEAGASELGKTASILARG CHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHCCHHHHHHCC ESLSAHARSAEYRIKDDVKGN CCCHHHHCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA