| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is 77457058
Identifier: 77457058
GI number: 77457058
Start: 979885
End: 980826
Strand: Direct
Name: 77457058
Synonym: Pfl01_0831
Alternate gene names: NA
Gene position: 979885-980826 (Clockwise)
Preceding gene: 77457057
Following gene: 77457065
Centisome position: 15.22
GC content: 62.53
Gene sequence:
>942_bases ATGCTGGCAATCTTCCTCGAAACCCTGAACATCACCGCGCCGGTGTTTGCCATGCTGTTTCTGGGGGTGCTGCTCAAGCG CATCGACTGGATCAACGACAACTTTATCCACACGGCCTCGTCGCTGGTGTTCAACGTCACCATGCCGGCGCTGCTGTTTC TCGGCATCCTGCACGCCGACCTGCACGCCGCGCTGCAACCGGCGCTGCTCATCTATTTCGCCCTTGCCACGCTGGTCAGT TTTGCCCTGGCCTGGGGCTGGGCGATTTTCCGCTGCCCGCGTGAAGACCGGGGCATCTACACCCAAGGCGCGTTTCGCGG CAACAACGGGGTGATCGGCCTGGCGCTGGCAGCGAGCATGTATGGCGACTACGGGATTTCCCTCGGGGCGATTCTCGCGG CGCTGGTGATCCTGTTCTACAACACCCTGTCGACCATCGTGCTGGCGGTGTACAGCCCGGTGATCAAGTCCGATCCGTGG AGCATCTGCAAAAGCGTGGTCAGCAATCCGTTGATCATCAGCGTGATCGCGGCGGCGCCGTTCGCTTATTTCAAGATCGG TCTGCCGGGGTGGCTGGAAACCTCCGGCCAGTACCTGGCGCAAACCACGCTGCCGCTGGCCCTGATCTGCATTGGCGGTA CGCTGTCGCTGGCGGCGCTGCGCAAGAGCGGCAACATGGCGCTCAGTTCGAGTCTGGTGAAGATGGTCGGTCTGCCGGTG ATCGCCACGCTGGGCGCGTGGCTCTGGGGCTTTCGCGGGGCGGAGCTGGGAATTCTGTTTCTGTACTTCGGCAGCCCGAC CGCCGCCGCCAGTTTCGTCATGGCCCGTGCGGCACAGGGCAACCATGAACTGGCGGCGGCGATCATCGTGCTGACCACAT TGATGGCAGCGATCACCACCAATATCGGGATCTTCTTCCTGCAGTGGGGCGGGTGGATCTGA
Upstream 100 bases:
>100_bases TGAGTCTGTTGATCGTTCCCACGCATAGCGTGGGAACGAACGGGGTGAAAGTGGCTTATCATTAGCCCCCTAACGACGCT CACCTCCAAGGCTCCCCGGC
Downstream 100 bases:
>100_bases GGCCGGCGGTTACTCGGGCTTCTGGTAGCTGTCGATCACTTCCTGCGCCGCGCGGAACGCATCGATCGCCGCCGGTACGC CGGCGTACACCGCGCAATGC
Product: auxin efflux carrier
Products: NA
Alternate protein names: Permease; Malonate Transporter; Transporter AEC Family; Auxin Efflux Carrier Family Protein; Transporter Auxin Efflux Carrier Family; Membrane Transport Protein Family Transporter; Transporter Protein; Membrane Transporter; Transporter Auxin Efflux Carrier Family Protein; Efflux Protein; AEC Family Malonate Efflux Carrier; Transporter Of Auxin Efflux Carrier Family; Transmembrane Protein; Membrane Transport Protein Auxin Efflux Carrier; Auxin Efflux Carrier Protein; Permease Transmembrane Protein
Number of amino acids: Translated: 313; Mature: 313
Protein sequence:
>313_residues MLAIFLETLNITAPVFAMLFLGVLLKRIDWINDNFIHTASSLVFNVTMPALLFLGILHADLHAALQPALLIYFALATLVS FALAWGWAIFRCPREDRGIYTQGAFRGNNGVIGLALAASMYGDYGISLGAILAALVILFYNTLSTIVLAVYSPVIKSDPW SICKSVVSNPLIISVIAAAPFAYFKIGLPGWLETSGQYLAQTTLPLALICIGGTLSLAALRKSGNMALSSSLVKMVGLPV IATLGAWLWGFRGAELGILFLYFGSPTAAASFVMARAAQGNHELAAAIIVLTTLMAAITTNIGIFFLQWGGWI
Sequences:
>Translated_313_residues MLAIFLETLNITAPVFAMLFLGVLLKRIDWINDNFIHTASSLVFNVTMPALLFLGILHADLHAALQPALLIYFALATLVS FALAWGWAIFRCPREDRGIYTQGAFRGNNGVIGLALAASMYGDYGISLGAILAALVILFYNTLSTIVLAVYSPVIKSDPW SICKSVVSNPLIISVIAAAPFAYFKIGLPGWLETSGQYLAQTTLPLALICIGGTLSLAALRKSGNMALSSSLVKMVGLPV IATLGAWLWGFRGAELGILFLYFGSPTAAASFVMARAAQGNHELAAAIIVLTTLMAAITTNIGIFFLQWGGWI >Mature_313_residues MLAIFLETLNITAPVFAMLFLGVLLKRIDWINDNFIHTASSLVFNVTMPALLFLGILHADLHAALQPALLIYFALATLVS FALAWGWAIFRCPREDRGIYTQGAFRGNNGVIGLALAASMYGDYGISLGAILAALVILFYNTLSTIVLAVYSPVIKSDPW SICKSVVSNPLIISVIAAAPFAYFKIGLPGWLETSGQYLAQTTLPLALICIGGTLSLAALRKSGNMALSSSLVKMVGLPV IATLGAWLWGFRGAELGILFLYFGSPTAAASFVMARAAQGNHELAAAIIVLTTLMAAITTNIGIFFLQWGGWI
Specific function: Unknown
COG id: COG0679
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33435; Mature: 33435
Theoretical pI: Translated: 8.78; Mature: 8.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAIFLETLNITAPVFAMLFLGVLLKRIDWINDNFIHTASSLVFNVTMPALLFLGILHAD CEEEEEEHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LHAALQPALLIYFALATLVSFALAWGWAIFRCPREDRGIYTQGAFRGNNGVIGLALAASM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCEECCCCEEHHHHHHHH YGDYGISLGAILAALVILFYNTLSTIVLAVYSPVIKSDPWSICKSVVSNPLIISVIAAAP HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEHHHHHCC FAYFKIGLPGWLETSGQYLAQTTLPLALICIGGTLSLAALRKSGNMALSSSLVKMVGLPV HHHEEECCCCHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHH IATLGAWLWGFRGAELGILFLYFGSPTAAASFVMARAAQGNHELAAAIIVLTTLMAAITT HHHHHHHHHCCCCCCEEEEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH NIGIFFLQWGGWI CCCEEEEECCCCC >Mature Secondary Structure MLAIFLETLNITAPVFAMLFLGVLLKRIDWINDNFIHTASSLVFNVTMPALLFLGILHAD CEEEEEEHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LHAALQPALLIYFALATLVSFALAWGWAIFRCPREDRGIYTQGAFRGNNGVIGLALAASM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCEECCCCEEHHHHHHHH YGDYGISLGAILAALVILFYNTLSTIVLAVYSPVIKSDPWSICKSVVSNPLIISVIAAAP HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEHHHHHCC FAYFKIGLPGWLETSGQYLAQTTLPLALICIGGTLSLAALRKSGNMALSSSLVKMVGLPV HHHEEECCCCHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHH IATLGAWLWGFRGAELGILFLYFGSPTAAASFVMARAAQGNHELAAAIIVLTTLMAAITT HHHHHHHHHCCCCCCEEEEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH NIGIFFLQWGGWI CCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA