| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is gntP [H]
Identifier: 77456949
GI number: 77456949
Start: 848776
End: 850125
Strand: Direct
Name: gntP [H]
Synonym: Pfl01_0721
Alternate gene names: 77456949
Gene position: 848776-850125 (Clockwise)
Preceding gene: 77456948
Following gene: 77456950
Centisome position: 13.18
GC content: 62.22
Gene sequence:
>1350_bases ATGACACCGTCCTTCGGCTATTGGCTGCTGGTGTACGCCGCCGTTGCCATCATCGCCCTGATCGTTCTGATCGCCCGTTA CCGGCTCAATCCGTTCATTGTCATCACCCTGATTTCCATCGGCCTGGCGCTGGTGGCGGGGATGCCGCCGTCCGGCGTGG TGGGGGCTTACGAGGCCGGGGTGGGCAAGACGCTGGGGCACATTGCGCTGGTGGTGGCGCTGGGGACGATGCTCGGCAAG ATGATGGCCGAGTCCGGTGGCGCCGAGCAGATGGCGCGCACGTTGATCGAGCGTTTTGGCGAGAAGAACGCGCACTGGGC GATGGTGTGCATTGCGTTTCTGGTGGGACTGCCGCTGTTTTTCGAAGTCGGCTTCGTGTTGCTGGTGCCGATTGCCTTTA CCGTGGCGCGGCGGGTGGGCGTGTCGATCCTGATGGTCGGTTTGCCGATGGTCGCGGGTCTGTCGGTGGTGCATGCGCTG GTGCCGCCTCATCCGGCGGCGATGCTGGCGGTGCAGGCTTATCAGGCGTCGGTCGGGCAGACCTTGCTGTATGCGATTGC CATCGGCATTCCGACGGCGATCATTGCCGGCCCCCTGTACGCCAAATTCATCGTGCCGCGCATTCAGTTGCCGGCGGATA ACCCGCTGGAAAAACAATTTCTCGAACGCGAACCCCGCGACAGCCTGCCGGGTTTCGGCATCACCATGGCGACCATTCTG TTGCCGGTGGTGCTGATGTTGATCGGCGGCTGGGCCAACCTGATTGCCACGCCGGGCAGCGCTTTCAATCAGTTCCTGTT GTTCATCGGCAACTCGGTGATCGCGCTGTTGCTGGCGACGCTGTTGAGTTTCTGGACCCTCGGCATTGCCCAGGGTTTCA ACCGCGAATCGATCCTCAAATTCACCAACGAATGCCTGGCACCGACCGCCAGCATCACCTTGCTGGTGGGCGCCGGTGGC GGTCTGAACCGGATTCTGGTGGACGCCGGCGTCACCGATCAGATCGTCGGCCTCGCTCACGAATTTCATTTGTCGCCGCT GATCATGGGCTGGCTGTTCGCCGCGTTGATGCGCATCGCCACCGGTTCGGCCACGGTCGCGATGACCACGGCTTCCGGCG TGGTCGCGCCAGTGGCCATCGGTCTGGGTTATCCCCACCCGGAACTGCTGGTGCTGGCGACCGGCGCGGGCTCGGTTATC TTTTCCCACGTCAACGACGGCGGCTTCTGGTTGATCAAGGAATACTTCAACATGACCGTGGCCCAGACGTTCAAGACCTG GACGGTGCTGGAAACCCTGATCTCGATTGTCGCTTTCGCCCTGACCGTCGGTCTTTCTTACCTGCTGTAG
Upstream 100 bases:
>100_bases CCTCCACGAAAATTACTTTCACTTGGTTTGAAAACTCGATCTCGAAATGATTTATGAGTTTCACAACCCATTCGAACGTG ACCCTTTCGAGGAGTACCGC
Downstream 100 bases:
>100_bases TCGGAGTTATCCGCCATGGACATCCTTTATCAGATCCGCGCCCGTCAGGATTCCTTCAGCGCCGGTGAAGGACGCATCGC CCGTCTGATGCTCGACGACG
Product: gluconate transporter
Products: Proton [Cytoplasm]; gluconate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 449; Mature: 448
Protein sequence:
>449_residues MTPSFGYWLLVYAAVAIIALIVLIARYRLNPFIVITLISIGLALVAGMPPSGVVGAYEAGVGKTLGHIALVVALGTMLGK MMAESGGAEQMARTLIERFGEKNAHWAMVCIAFLVGLPLFFEVGFVLLVPIAFTVARRVGVSILMVGLPMVAGLSVVHAL VPPHPAAMLAVQAYQASVGQTLLYAIAIGIPTAIIAGPLYAKFIVPRIQLPADNPLEKQFLEREPRDSLPGFGITMATIL LPVVLMLIGGWANLIATPGSAFNQFLLFIGNSVIALLLATLLSFWTLGIAQGFNRESILKFTNECLAPTASITLLVGAGG GLNRILVDAGVTDQIVGLAHEFHLSPLIMGWLFAALMRIATGSATVAMTTASGVVAPVAIGLGYPHPELLVLATGAGSVI FSHVNDGGFWLIKEYFNMTVAQTFKTWTVLETLISIVAFALTVGLSYLL
Sequences:
>Translated_449_residues MTPSFGYWLLVYAAVAIIALIVLIARYRLNPFIVITLISIGLALVAGMPPSGVVGAYEAGVGKTLGHIALVVALGTMLGK MMAESGGAEQMARTLIERFGEKNAHWAMVCIAFLVGLPLFFEVGFVLLVPIAFTVARRVGVSILMVGLPMVAGLSVVHAL VPPHPAAMLAVQAYQASVGQTLLYAIAIGIPTAIIAGPLYAKFIVPRIQLPADNPLEKQFLEREPRDSLPGFGITMATIL LPVVLMLIGGWANLIATPGSAFNQFLLFIGNSVIALLLATLLSFWTLGIAQGFNRESILKFTNECLAPTASITLLVGAGG GLNRILVDAGVTDQIVGLAHEFHLSPLIMGWLFAALMRIATGSATVAMTTASGVVAPVAIGLGYPHPELLVLATGAGSVI FSHVNDGGFWLIKEYFNMTVAQTFKTWTVLETLISIVAFALTVGLSYLL >Mature_448_residues TPSFGYWLLVYAAVAIIALIVLIARYRLNPFIVITLISIGLALVAGMPPSGVVGAYEAGVGKTLGHIALVVALGTMLGKM MAESGGAEQMARTLIERFGEKNAHWAMVCIAFLVGLPLFFEVGFVLLVPIAFTVARRVGVSILMVGLPMVAGLSVVHALV PPHPAAMLAVQAYQASVGQTLLYAIAIGIPTAIIAGPLYAKFIVPRIQLPADNPLEKQFLEREPRDSLPGFGITMATILL PVVLMLIGGWANLIATPGSAFNQFLLFIGNSVIALLLATLLSFWTLGIAQGFNRESILKFTNECLAPTASITLLVGAGGG LNRILVDAGVTDQIVGLAHEFHLSPLIMGWLFAALMRIATGSATVAMTTASGVVAPVAIGLGYPHPELLVLATGAGSVIF SHVNDGGFWLIKEYFNMTVAQTFKTWTVLETLISIVAFALTVGLSYLL
Specific function: Part Of The Gluconate Utilization System Gnt-I; High- Affinity Intake Of Gluconate. [C]
COG id: COG2610
COG function: function code GE; H+/gluconate symporter and related permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gntP permease family [H]
Homologues:
Organism=Escherichia coli, GI48994935, Length=429, Percent_Identity=44.7552447552448, Blast_Score=351, Evalue=5e-98, Organism=Escherichia coli, GI1790716, Length=428, Percent_Identity=41.1214953271028, Blast_Score=324, Evalue=9e-90, Organism=Escherichia coli, GI2367370, Length=418, Percent_Identity=39.9521531100478, Blast_Score=295, Evalue=4e-81, Organism=Escherichia coli, GI1788707, Length=446, Percent_Identity=35.8744394618834, Blast_Score=278, Evalue=5e-76, Organism=Escherichia coli, GI1790776, Length=429, Percent_Identity=32.8671328671329, Blast_Score=251, Evalue=7e-68, Organism=Escherichia coli, GI48994939, Length=431, Percent_Identity=35.2668213457077, Blast_Score=236, Evalue=3e-63, Organism=Escherichia coli, GI1789097, Length=444, Percent_Identity=32.4324324324324, Blast_Score=217, Evalue=1e-57,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003474 [H]
Pfam domain/function: PF02447 GntP_permease [H]
EC number: NA
Molecular weight: Translated: 47376; Mature: 47245
Theoretical pI: Translated: 7.73; Mature: 7.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPSFGYWLLVYAAVAIIALIVLIARYRLNPFIVITLISIGLALVAGMPPSGVVGAYEAG CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHC VGKTLGHIALVVALGTMLGKMMAESGGAEQMARTLIERFGEKNAHWAMVCIAFLVGLPLF CHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH FEVGFVLLVPIAFTVARRVGVSILMVGLPMVAGLSVVHALVPPHPAAMLAVQAYQASVGQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH TLLYAIAIGIPTAIIAGPLYAKFIVPRIQLPADNPLEKQFLEREPRDSLPGFGITMATIL HHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHCCCCCCCCCCHHHHHHHH LPVVLMLIGGWANLIATPGSAFNQFLLFIGNSVIALLLATLLSFWTLGIAQGFNRESILK HHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH FTNECLAPTASITLLVGAGGGLNRILVDAGVTDQIVGLAHEFHLSPLIMGWLFAALMRIA HHHHHCCCCCEEEEEEECCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TGSATVAMTTASGVVAPVAIGLGYPHPELLVLATGAGSVIFSHVNDGGFWLIKEYFNMTV CCCCEEEEEECCCHHHHHHHHCCCCCCCEEEEEECCCCEEEEEECCCCEEEHHHHHHHHH AQTFKTWTVLETLISIVAFALTVGLSYLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure TPSFGYWLLVYAAVAIIALIVLIARYRLNPFIVITLISIGLALVAGMPPSGVVGAYEAG CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHC VGKTLGHIALVVALGTMLGKMMAESGGAEQMARTLIERFGEKNAHWAMVCIAFLVGLPLF CHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH FEVGFVLLVPIAFTVARRVGVSILMVGLPMVAGLSVVHALVPPHPAAMLAVQAYQASVGQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH TLLYAIAIGIPTAIIAGPLYAKFIVPRIQLPADNPLEKQFLEREPRDSLPGFGITMATIL HHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHCCCCCCCCCCHHHHHHHH LPVVLMLIGGWANLIATPGSAFNQFLLFIGNSVIALLLATLLSFWTLGIAQGFNRESILK HHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH FTNECLAPTASITLLVGAGGGLNRILVDAGVTDQIVGLAHEFHLSPLIMGWLFAALMRIA HHHHHCCCCCEEEEEEECCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TGSATVAMTTASGVVAPVAIGLGYPHPELLVLATGAGSVIFSHVNDGGFWLIKEYFNMTV CCCCEEEEEECCCHHHHHHHHCCCCCCCEEEEEECCCCEEEEEECCCCEEEHHHHHHHHH AQTFKTWTVLETLISIVAFALTVGLSYLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; gluconate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + gluconate [Periplasm] = Proton [Cytoplasm] + gluconate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA