| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is rmlA2 [H]
Identifier: 77456930
GI number: 77456930
Start: 830225
End: 831148
Strand: Direct
Name: rmlA2 [H]
Synonym: Pfl01_0702
Alternate gene names: 77456930
Gene position: 830225-831148 (Clockwise)
Preceding gene: 77456929
Following gene: 77456932
Centisome position: 12.89
GC content: 60.39
Gene sequence:
>924_bases ATGGCCAAGTACAAAGGAATTCTGCTGGCGGGCGGCGCCGGTTCGCGTCTGCACCCGATCACCCTGGGCGTCTCGAAACA GTCGCTGCCGGTGTATGACAAACCGATGATCTATTACCCGCTGTCGGTGCTGATGCTGGCGGAAATCCGCGAGATCCTGA TCATCTCCACCCCGGAAGATCTGCCGGGTTTCCAGCGCATGCTCGGCGACGGCAGTCAGTTGGGCCTGAGCTTGAGTTAC GCGGTGCAACCGAGTCCGGACGGCCTCGCTCAGGCGTTCATCATCGGTCGTGAATTCGTCGGTGAAGACAACGTCTGCCT AGTGCTCGGTGACAACATTTTCTACGGCGCCGGCTTCGGTGAAACCCTGCTGCAAGCGGCGGCGCGTGATGAAGGCGCGA CAGTGTTCGGCTATTACGTGGCCGATCCCGAGCGCTTTGGCGTGGTGGAATTCGATGCTGCCGGCAAGGCCTTGAGCATC TGCGAAAAACCGAGCGATCCAAAGTCCAACTACGCCGTCACCGGCCTGTATTTCTACGACAACGAAGTGCTGCAGATTGC CGCCGACATCAAGCCGTCGCCGCGCGGCGAGCTGGAGATCACCGACGTCAACAACGTCTACCTGCAACGCGGCAAATTGA ATGTGTCGGTGATGGGCCGTGGCATGGCCTGGCTCGACACCGGCACCCACGACGCGTTGATGGAAGCGGGCAATTTCGTC CAGGCCATCGAGAAACGCCAGGGCCTGAAAATCGCCTGCCTCGAAGAGATCGCCTACCACAAGGGCTGGATCGACGACGC GCAATTGCTGGTGCATGCGGGCAGCATGAGCAAGACCGGTTACGGTCAGTACCTGGCGCGTTTGATCCACGATGATGTGG TGGTGGCGATGGATGCGCAGCGCCCGTTGAAAGGCGCTGCCTGA
Upstream 100 bases:
>100_bases CGGTGCCTACGCGCTGGAGCGCCTCGGCGAGCAAAGCGACAAAGCCCTTGTGGCCTGAACGTTCAGTCATTCAAATCTCA CTGCTTGAAAGGAAAAAAGC
Downstream 100 bases:
>100_bases TCAAGTGTGGGAGCGAGCCTGCTCGCTCCCACAGGGTCAGTGGCCGGTCACGCTGTCGAGTTCGGCAGCTTTGACCGTAG CGCGTGGATCGGCCGACGGA
Product: glucose-1-phosphate thymidylyltransferase
Products: NA
Alternate protein names: G1P-TT 2; dTDP-glucose pyrophosphorylase 2; dTDP-glucose synthase 2 [H]
Number of amino acids: Translated: 307; Mature: 306
Protein sequence:
>307_residues MAKYKGILLAGGAGSRLHPITLGVSKQSLPVYDKPMIYYPLSVLMLAEIREILIISTPEDLPGFQRMLGDGSQLGLSLSY AVQPSPDGLAQAFIIGREFVGEDNVCLVLGDNIFYGAGFGETLLQAAARDEGATVFGYYVADPERFGVVEFDAAGKALSI CEKPSDPKSNYAVTGLYFYDNEVLQIAADIKPSPRGELEITDVNNVYLQRGKLNVSVMGRGMAWLDTGTHDALMEAGNFV QAIEKRQGLKIACLEEIAYHKGWIDDAQLLVHAGSMSKTGYGQYLARLIHDDVVVAMDAQRPLKGAA
Sequences:
>Translated_307_residues MAKYKGILLAGGAGSRLHPITLGVSKQSLPVYDKPMIYYPLSVLMLAEIREILIISTPEDLPGFQRMLGDGSQLGLSLSY AVQPSPDGLAQAFIIGREFVGEDNVCLVLGDNIFYGAGFGETLLQAAARDEGATVFGYYVADPERFGVVEFDAAGKALSI CEKPSDPKSNYAVTGLYFYDNEVLQIAADIKPSPRGELEITDVNNVYLQRGKLNVSVMGRGMAWLDTGTHDALMEAGNFV QAIEKRQGLKIACLEEIAYHKGWIDDAQLLVHAGSMSKTGYGQYLARLIHDDVVVAMDAQRPLKGAA >Mature_306_residues AKYKGILLAGGAGSRLHPITLGVSKQSLPVYDKPMIYYPLSVLMLAEIREILIISTPEDLPGFQRMLGDGSQLGLSLSYA VQPSPDGLAQAFIIGREFVGEDNVCLVLGDNIFYGAGFGETLLQAAARDEGATVFGYYVADPERFGVVEFDAAGKALSIC EKPSDPKSNYAVTGLYFYDNEVLQIAADIKPSPRGELEITDVNNVYLQRGKLNVSVMGRGMAWLDTGTHDALMEAGNFVQ AIEKRQGLKIACLEEIAYHKGWIDDAQLLVHAGSMSKTGYGQYLARLIHDDVVVAMDAQRPLKGAA
Specific function: Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis [H]
COG id: COG1209
COG function: function code M; dTDP-glucose pyrophosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glucose-1-phosphate thymidylyltransferase family [H]
Homologues:
Organism=Escherichia coli, GI1790224, Length=286, Percent_Identity=67.8321678321678, Blast_Score=407, Evalue=1e-115, Organism=Escherichia coli, GI1788351, Length=291, Percent_Identity=64.2611683848797, Blast_Score=399, Evalue=1e-112, Organism=Caenorhabditis elegans, GI133931050, Length=181, Percent_Identity=25.414364640884, Blast_Score=67, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6320148, Length=255, Percent_Identity=25.0980392156863, Blast_Score=68, Evalue=2e-12, Organism=Drosophila melanogaster, GI21355443, Length=190, Percent_Identity=23.1578947368421, Blast_Score=66, Evalue=3e-11, Organism=Drosophila melanogaster, GI24644084, Length=190, Percent_Identity=23.1578947368421, Blast_Score=66, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005907 - InterPro: IPR005835 [H]
Pfam domain/function: PF00483 NTP_transferase [H]
EC number: =2.7.7.24 [H]
Molecular weight: Translated: 33228; Mature: 33097
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKYKGILLAGGAGSRLHPITLGVSKQSLPVYDKPMIYYPLSVLMLAEIREILIISTPED CCCCCCEEEECCCCCCEEEEEEECCCCCCCCCCCCEEEHHHHHHHHHHHCEEEEEECCCC LPGFQRMLGDGSQLGLSLSYAVQPSPDGLAQAFIIGREFVGEDNVCLVLGDNIFYGAGFG CCHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHEEHHHHCCCCCEEEEECCCEEEECCHH ETLLQAAARDEGATVFGYYVADPERFGVVEFDAAGKALSICEKPSDPKSNYAVTGLYFYD HHHHHHHHCCCCCEEEEEEEECCCCCCEEEECCCCCEEHHHCCCCCCCCCEEEEEEEEEC NEVLQIAADIKPSPRGELEITDVNNVYLQRGKLNVSVMGRGMAWLDTGTHDALMEAGNFV CCEEEEEECCCCCCCCCEEEEECCCEEEECCEEEEEEEECCEEEEECCCHHHHHHCCHHH QAIEKRQGLKIACLEEIAYHKGWIDDAQLLVHAGSMSKTGYGQYLARLIHDDVVVAMDAQ HHHHHHCCCEEEHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHCCCEEEEEECC RPLKGAA CCCCCCC >Mature Secondary Structure AKYKGILLAGGAGSRLHPITLGVSKQSLPVYDKPMIYYPLSVLMLAEIREILIISTPED CCCCCEEEECCCCCCEEEEEEECCCCCCCCCCCCEEEHHHHHHHHHHHCEEEEEECCCC LPGFQRMLGDGSQLGLSLSYAVQPSPDGLAQAFIIGREFVGEDNVCLVLGDNIFYGAGFG CCHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHEEHHHHCCCCCEEEEECCCEEEECCHH ETLLQAAARDEGATVFGYYVADPERFGVVEFDAAGKALSICEKPSDPKSNYAVTGLYFYD HHHHHHHHCCCCCEEEEEEEECCCCCCEEEECCCCCEEHHHCCCCCCCCCEEEEEEEEEC NEVLQIAADIKPSPRGELEITDVNNVYLQRGKLNVSVMGRGMAWLDTGTHDALMEAGNFV CCEEEEEECCCCCCCCCEEEEECCCEEEECCEEEEEEEECCEEEEECCCHHHHHHCCHHH QAIEKRQGLKIACLEEIAYHKGWIDDAQLLVHAGSMSKTGYGQYLARLIHDDVVVAMDAQ HHHHHHCCCEEEHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHCCCEEEEEECC RPLKGAA CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1379743; 9278503; 7559340 [H]