| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77456887
Identifier: 77456887
GI number: 77456887
Start: 773827
End: 775044
Strand: Direct
Name: 77456887
Synonym: Pfl01_0659
Alternate gene names: NA
Gene position: 773827-775044 (Clockwise)
Preceding gene: 77456886
Following gene: 77456891
Centisome position: 12.02
GC content: 63.3
Gene sequence:
>1218_bases GTGACCACCACCTCCCGCAATGCCCGGCTGATCATCACGGCCCGGCTGATTTCCGATTTCGGCGCGTTCCTGAACATGGT TGCGCTGGCCACTTATGTCTACCTGCTGAGCAACAGCGCGATGAGCGTGGGGATTTTTCTCGCCAGTCGCGTGGGCGGCG GAATCTTTGCGAGTCTGATCGGCACCGCGTTCTATCGTCGATGCAGTGGCCGTCTGCCGTTGATGGCCTTCGATCTGCTG CGCGCCGCTGTGCTCGGGCTGTTGCTCATCGTGCCGGTCAGTCAGCAGGCGTTGTTGCTGCCGCTGATCGCGTTCGGCCT GGGCTTTGGCAATTCGATGTTCGCCATCGGCCTCAACAGCCAGTTGCCGCGCTTGATCGAGCCGGCGCAGTTGCTCAAGA CCAATGCCTGGATCACGTCCGCCTCGTCCATGGCGATGGTCGGCGGCAGTCTGGTGTCCGGGTTGTTGGTTGCGGGGTTT GGTTTTGAAACGGTGTTCGCGCTGAACGCGGTGACCTATCTGCTGGCGGCAGTGTTGATTGCGCCGCTGCGGTTCAGTGC ACCGGAGCCGGTGGCCGAATCAAGCGATGAGCGCAGCGAATGGTCAGCGTTGGTCCAGGGCTTGCGCAGCGCTCCGGTGG TGGCGGCGATGCTGGCGGTGACCATGGCCGACACCCTTGGCAGCGCTGCGCACAACGTCGGTTTTCCGATCATCTCCAAA CTGCTGACGCCGGACTCGGCCAGCACCACGCTGGGCCTGATGCTTGCGGTGTGGGCCGCCGGCAAACTGCTCGGCGCGCG GATCGCCAGTCGCCTGAACGGCTCGGAAAACGTTCATCTCGAGCGCCGCTATTTCGGTGGCGTGCTGCTGATGTCCTGCG GTTTCATCCTGATGTTCCAGCAGCACAGCGTCGTCGGTCTGTTGCTGTTTTCGCTGCCGGCCGGACTGGGCGACGGATTC TCGGAAGTCGGTCTGATGTCACGCCTGCAACGGGAACCGGAGCCCTTGCGCCTGCCGATCTTCAGTTTCCTGACGCTGTT GCAGATGACCGGATTCGGCGTCGGCATGCTGATCGCCGCACCGTTCTATGAGTGGTGGGCGCCGGGTGCCGTGGTGCTGC TGTTCCACGGCATTCCCCTCGCCACAGTGCTGTCGATGAAAATCCTGCTGCTCAGGCGCGCGCGGGTTGCGCGCAGCAGC CCGACGCCAGTTCCTTGA
Upstream 100 bases:
>100_bases AGGGCAAGTCCGACGAACCGCCTCCGCCACCGTGGATGCAGTGAGCATCTGAAAAAGAAAACCCGGCTTCGGCCGGGTTT TACACATTCAAGGATTGATT
Downstream 100 bases:
>100_bases GGATCGGACAGTCCGGGCGATGGTCGCCGTGGCAGTGCTCGACCAGATCCTGCAGGGTGTCGCGCAGTTCGCCGAGTTCG CGGATCTTCTGATTCAGCTC
Product: major facilitator transporter
Products: NA
Alternate protein names: Facilitator Family Transporter; Facilitator Superfamily Transporter Permease; Facilitator Superfamily Protein; Facilitator Superfamily Transporter Permease Component; Facilitator Superfamily Permease
Number of amino acids: Translated: 405; Mature: 404
Protein sequence:
>405_residues MTTTSRNARLIITARLISDFGAFLNMVALATYVYLLSNSAMSVGIFLASRVGGGIFASLIGTAFYRRCSGRLPLMAFDLL RAAVLGLLLIVPVSQQALLLPLIAFGLGFGNSMFAIGLNSQLPRLIEPAQLLKTNAWITSASSMAMVGGSLVSGLLVAGF GFETVFALNAVTYLLAAVLIAPLRFSAPEPVAESSDERSEWSALVQGLRSAPVVAAMLAVTMADTLGSAAHNVGFPIISK LLTPDSASTTLGLMLAVWAAGKLLGARIASRLNGSENVHLERRYFGGVLLMSCGFILMFQQHSVVGLLLFSLPAGLGDGF SEVGLMSRLQREPEPLRLPIFSFLTLLQMTGFGVGMLIAAPFYEWWAPGAVVLLFHGIPLATVLSMKILLLRRARVARSS PTPVP
Sequences:
>Translated_405_residues MTTTSRNARLIITARLISDFGAFLNMVALATYVYLLSNSAMSVGIFLASRVGGGIFASLIGTAFYRRCSGRLPLMAFDLL RAAVLGLLLIVPVSQQALLLPLIAFGLGFGNSMFAIGLNSQLPRLIEPAQLLKTNAWITSASSMAMVGGSLVSGLLVAGF GFETVFALNAVTYLLAAVLIAPLRFSAPEPVAESSDERSEWSALVQGLRSAPVVAAMLAVTMADTLGSAAHNVGFPIISK LLTPDSASTTLGLMLAVWAAGKLLGARIASRLNGSENVHLERRYFGGVLLMSCGFILMFQQHSVVGLLLFSLPAGLGDGF SEVGLMSRLQREPEPLRLPIFSFLTLLQMTGFGVGMLIAAPFYEWWAPGAVVLLFHGIPLATVLSMKILLLRRARVARSS PTPVP >Mature_404_residues TTTSRNARLIITARLISDFGAFLNMVALATYVYLLSNSAMSVGIFLASRVGGGIFASLIGTAFYRRCSGRLPLMAFDLLR AAVLGLLLIVPVSQQALLLPLIAFGLGFGNSMFAIGLNSQLPRLIEPAQLLKTNAWITSASSMAMVGGSLVSGLLVAGFG FETVFALNAVTYLLAAVLIAPLRFSAPEPVAESSDERSEWSALVQGLRSAPVVAAMLAVTMADTLGSAAHNVGFPIISKL LTPDSASTTLGLMLAVWAAGKLLGARIASRLNGSENVHLERRYFGGVLLMSCGFILMFQQHSVVGLLLFSLPAGLGDGFS EVGLMSRLQREPEPLRLPIFSFLTLLQMTGFGVGMLIAAPFYEWWAPGAVVLLFHGIPLATVLSMKILLLRRARVARSSP TPVP
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42988; Mature: 42856
Theoretical pI: Translated: 10.53; Mature: 10.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTTSRNARLIITARLISDFGAFLNMVALATYVYLLSNSAMSVGIFLASRVGGGIFASLI CCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHH GTAFYRRCSGRLPLMAFDLLRAAVLGLLLIVPVSQQALLLPLIAFGLGFGNSMFAIGLNS HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEECCC QLPRLIEPAQLLKTNAWITSASSMAMVGGSLVSGLLVAGFGFETVFALNAVTYLLAAVLI CCCHHHCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH APLRFSAPEPVAESSDERSEWSALVQGLRSAPVVAAMLAVTMADTLGSAAHNVGFPIISK HHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHH LLTPDSASTTLGLMLAVWAAGKLLGARIASRLNGSENVHLERRYFGGVLLMSCGFILMFQ HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHCCHHEEEC QHSVVGLLLFSLPAGLGDGFSEVGLMSRLQREPEPLRLPIFSFLTLLQMTGFGVGMLIAA CCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHH PFYEWWAPGAVVLLFHGIPLATVLSMKILLLRRARVARSSPTPVP HHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure TTTSRNARLIITARLISDFGAFLNMVALATYVYLLSNSAMSVGIFLASRVGGGIFASLI CCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHH GTAFYRRCSGRLPLMAFDLLRAAVLGLLLIVPVSQQALLLPLIAFGLGFGNSMFAIGLNS HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEECCC QLPRLIEPAQLLKTNAWITSASSMAMVGGSLVSGLLVAGFGFETVFALNAVTYLLAAVLI CCCHHHCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH APLRFSAPEPVAESSDERSEWSALVQGLRSAPVVAAMLAVTMADTLGSAAHNVGFPIISK HHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHH LLTPDSASTTLGLMLAVWAAGKLLGARIASRLNGSENVHLERRYFGGVLLMSCGFILMFQ HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHCCHHEEEC QHSVVGLLLFSLPAGLGDGFSEVGLMSRLQREPEPLRLPIFSFLTLLQMTGFGVGMLIAA CCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHH PFYEWWAPGAVVLLFHGIPLATVLSMKILLLRRARVARSSPTPVP HHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA