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The map label for this gene is bphP [H]

Identifier: 77456807

GI number: 77456807

Start: 671257

End: 672384

Strand: Reverse

Name: bphP [H]

Synonym: Pfl01_0579

Alternate gene names: 77456807

Gene position: 672384-671257 (Counterclockwise)

Preceding gene: 77456808

Following gene: 77456804

Centisome position: 10.44

GC content: 62.5

Gene sequence:

>1128_bases
ATGCGTCTTTCCGAGTTCATCCTGGCCAATATCGACGCAATCGTCGATGAATGGGAAAAGTTTGCCGCTACCATTACCCC
GCCCGCCGACCATCTGGACTCGGCCGGTCTGCGCGATCACGCCAGCGCCATCCTGCGGGCCGCCGCTCGCGACATGAGCA
AACCGCAAAGCCGCGACGAACAGGTCGCCAAGGCCAAGGGCGAAGGCCCGGAGAAAAGCCCGAGCCTGGATGAAGCCGGA
GCCAGCCATGGCGAGCTGCGCCACACCGTCGGTTTCGATCTGGTACAGATGACCTCGGAGTTTCGCCACCTGCGCGCCGT
GGTGATCCGACGCTGGGTCGAGCATATCGAATTACCGGACACCACCTGCTTCCAGGACATGATCCGCTTCAACGAAGCCA
TCGACGAAGCCCTGGCCGAATCGACCGCCGCCTATGCCGAACAGGTCAACCGCTCACGGGACATTTTTCTCGCCATTCTC
GGCCATGACCTGCGCGCGCCCCTGCAAGCGGTGAGCATGTCCACCGAGTTGCTGATGCGCAAAACCACGCTGGAAGGCGA
TGCGCTGACTTGTGCGCTGAACATCAAACAGGGCGCGCGGCACATGGCGGCCATGGTCAGCGACCTGCTGGAACTGGTAC
GCAGCCGCCTGGGCAGAAGCCTGCCGATCGAACCGGCGCCAATGGATCTGGCCGACGCGGCGCGAGCAGCCATTGCCGAA
GCGTGCGCCGGCAATCCGGACAGTGACCCGACATTGAACACCGAGGGTGACACCCGTGGTGTCTGGGACGCTGGTCGGAT
CGATCAACTGCTGCAGAACCTGATCGGCAATGCCTTGCAGCATGGCTCTGATCCGCGCGAAGTGATCGTGACGTTGAAGG
GGGAAGCCAGGCAGGTGCTTCTGACCGTGCACAATTACGGCCCGCCCATTTCCGAAGAGGCCATCGGCACCATTTTCGAC
CCCTTGGTACGCAGCGCCGACGAAGAACTCGGCCAGCCGTCGACCAGCCTGGGTCTGGGCCTGTTCATCGTCAAGGAAGT
GGTGACCGCCCATGGCGGGACGATCGAAGTCAGCTCAAGCGCAGCCAACGGCACGCTGTTCAGCGTGATGCTGCCCCGAC
AGGTTTAA

Upstream 100 bases:

>100_bases
CTTTTTCGTGATGCTGGAAAACCACTGGGCAATGGGTCGTGTATTTCTCGCCAAAGGGACTAATATTCGATTCGCTGTCG
CCTTTATTCAGGAACTGCCC

Downstream 100 bases:

>100_bases
GCAGAGAAACTATTCGACCACCAGCCGCGCCAGGCGCTGCCTGAGCATCCGGTTCTCGGCCCGCAGCTCCTGCACTTCTT
CCAGCAGGTCCAGCGCCAGG

Product: histidine kinase

Products: NA

Alternate protein names: Phytochrome-like protein [H]

Number of amino acids: Translated: 375; Mature: 375

Protein sequence:

>375_residues
MRLSEFILANIDAIVDEWEKFAATITPPADHLDSAGLRDHASAILRAAARDMSKPQSRDEQVAKAKGEGPEKSPSLDEAG
ASHGELRHTVGFDLVQMTSEFRHLRAVVIRRWVEHIELPDTTCFQDMIRFNEAIDEALAESTAAYAEQVNRSRDIFLAIL
GHDLRAPLQAVSMSTELLMRKTTLEGDALTCALNIKQGARHMAAMVSDLLELVRSRLGRSLPIEPAPMDLADAARAAIAE
ACAGNPDSDPTLNTEGDTRGVWDAGRIDQLLQNLIGNALQHGSDPREVIVTLKGEARQVLLTVHNYGPPISEEAIGTIFD
PLVRSADEELGQPSTSLGLGLFIVKEVVTAHGGTIEVSSSAANGTLFSVMLPRQV

Sequences:

>Translated_375_residues
MRLSEFILANIDAIVDEWEKFAATITPPADHLDSAGLRDHASAILRAAARDMSKPQSRDEQVAKAKGEGPEKSPSLDEAG
ASHGELRHTVGFDLVQMTSEFRHLRAVVIRRWVEHIELPDTTCFQDMIRFNEAIDEALAESTAAYAEQVNRSRDIFLAIL
GHDLRAPLQAVSMSTELLMRKTTLEGDALTCALNIKQGARHMAAMVSDLLELVRSRLGRSLPIEPAPMDLADAARAAIAE
ACAGNPDSDPTLNTEGDTRGVWDAGRIDQLLQNLIGNALQHGSDPREVIVTLKGEARQVLLTVHNYGPPISEEAIGTIFD
PLVRSADEELGQPSTSLGLGLFIVKEVVTAHGGTIEVSSSAANGTLFSVMLPRQV
>Mature_375_residues
MRLSEFILANIDAIVDEWEKFAATITPPADHLDSAGLRDHASAILRAAARDMSKPQSRDEQVAKAKGEGPEKSPSLDEAG
ASHGELRHTVGFDLVQMTSEFRHLRAVVIRRWVEHIELPDTTCFQDMIRFNEAIDEALAESTAAYAEQVNRSRDIFLAIL
GHDLRAPLQAVSMSTELLMRKTTLEGDALTCALNIKQGARHMAAMVSDLLELVRSRLGRSLPIEPAPMDLADAARAAIAE
ACAGNPDSDPTLNTEGDTRGVWDAGRIDQLLQNLIGNALQHGSDPREVIVTLKGEARQVLLTVHNYGPPISEEAIGTIFD
PLVRSADEELGQPSTSLGLGLFIVKEVVTAHGGTIEVSSSAANGTLFSVMLPRQV

Specific function: Photoreceptor which exists in two forms that are reversibly interconvertible by light:the R form that absorbs maximally in the red region of the spectrum and the FR form that absorbs maximally in the far-red region [H]

COG id: COG4251

COG function: function code T; Bacteriophytochrome (light-regulated signal transduction histidine kinase)

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI1786783, Length=249, Percent_Identity=28.5140562248996, Blast_Score=75, Evalue=6e-15,
Organism=Escherichia coli, GI145693157, Length=252, Percent_Identity=25.7936507936508, Blast_Score=75, Evalue=6e-15,
Organism=Escherichia coli, GI1786912, Length=237, Percent_Identity=27.8481012658228, Blast_Score=69, Evalue=5e-13,
Organism=Escherichia coli, GI48994928, Length=294, Percent_Identity=23.1292517006803, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1789149, Length=232, Percent_Identity=26.2931034482759, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI1786600, Length=239, Percent_Identity=27.6150627615063, Blast_Score=65, Evalue=6e-12,
Organism=Escherichia coli, GI87081816, Length=258, Percent_Identity=26.3565891472868, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1790346, Length=230, Percent_Identity=25.6521739130435, Blast_Score=62, Evalue=5e-11,
Organism=Escherichia coli, GI1790436, Length=223, Percent_Identity=26.0089686098655, Blast_Score=62, Evalue=8e-11,
Organism=Escherichia coli, GI1789808, Length=233, Percent_Identity=24.8927038626609, Blast_Score=62, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003018
- InterPro:   IPR013654
- InterPro:   IPR016132
- InterPro:   IPR001294
- InterPro:   IPR013515
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF01590 GAF; PF02518 HATPase_c; PF00512 HisKA; PF08446 PAS_2; PF00360 Phytochrome [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 40574; Mature: 40574

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLSEFILANIDAIVDEWEKFAATITPPADHLDSAGLRDHASAILRAAARDMSKPQSRDE
CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHH
QVAKAKGEGPEKSPSLDEAGASHGELRHTVGFDLVQMTSEFRHLRAVVIRRWVEHIELPD
HHHHHCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
TTCFQDMIRFNEAIDEALAESTAAYAEQVNRSRDIFLAILGHDLRAPLQAVSMSTELLMR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHH
KTTLEGDALTCALNIKQGARHMAAMVSDLLELVRSRLGRSLPIEPAPMDLADAARAAIAE
HHCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH
ACAGNPDSDPTLNTEGDTRGVWDAGRIDQLLQNLIGNALQHGSDPREVIVTLKGEARQVL
HHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHEEEEECCCCEEEE
LTVHNYGPPISEEAIGTIFDPLVRSADEELGQPSTSLGLGLFIVKEVVTAHGGTIEVSSS
EEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEECC
AANGTLFSVMLPRQV
CCCCEEEEEECCCCC
>Mature Secondary Structure
MRLSEFILANIDAIVDEWEKFAATITPPADHLDSAGLRDHASAILRAAARDMSKPQSRDE
CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHH
QVAKAKGEGPEKSPSLDEAGASHGELRHTVGFDLVQMTSEFRHLRAVVIRRWVEHIELPD
HHHHHCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
TTCFQDMIRFNEAIDEALAESTAAYAEQVNRSRDIFLAILGHDLRAPLQAVSMSTELLMR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHH
KTTLEGDALTCALNIKQGARHMAAMVSDLLELVRSRLGRSLPIEPAPMDLADAARAAIAE
HHCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH
ACAGNPDSDPTLNTEGDTRGVWDAGRIDQLLQNLIGNALQHGSDPREVIVTLKGEARQVL
HHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHEEEEECCCCEEEE
LTVHNYGPPISEEAIGTIFDPLVRSADEELGQPSTSLGLGLFIVKEVVTAHGGTIEVSSS
EEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEECC
AANGTLFSVMLPRQV
CCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]