| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is bfr [C]
Identifier: 77456795
GI number: 77456795
Start: 661163
End: 661693
Strand: Reverse
Name: bfr [C]
Synonym: Pfl01_0567
Alternate gene names: 77456795
Gene position: 661693-661163 (Counterclockwise)
Preceding gene: 77456796
Following gene: 77456793
Centisome position: 10.28
GC content: 59.13
Gene sequence:
>531_bases ATGAGTGACCTGCAATTGTCTGATGTTCAAACCCTGCGCGAGCGCGCCCGCCAGCACGTGGAAAATGGCGCGGTGACCGA AAGCTACAGCGCCAACCGTGAAGAAGTGCTGCGCCTGCTCAACGAATCGCTGGCCACGGAACTGGTCTGCGTCTTGCGCT ACAAGCGCCACTACTTCATGGCCAACGGCCTGAAAGCCAACGTCGCCGCCGACGAGTTCCTCGAGCACGCCACTCAGGAA GCCGAACACGCCGACCGTCTCGCCGAGCGCATCGTGCAACTGGGTGGCGAGCCTGAATTCAACCCTGACCTGCTGTCGAA GATGTCCCACGCGCAATACGTGGCCGGCAACACCTTGAAGGAAATGGTTTACGAAGACCTGGTGGCCGAGCGGATCGCCA TCGACAGCTACCGCGAAATCATCCAGTACATCGGTGAAAAGGACCCGACCACGCGCCGGATCTTCGAAGACATCCTGGCT CAGGAGGAAGAGCATGCGGATGACATGGCGGATATTCTGAAAGACCTCTGA
Upstream 100 bases:
>100_bases GAATCCGACAAAACTTTTTGCAGCATTCATCACTCACAACCTGGTAACGATCACGTCAGCAGAACGTGACGCCAATCGGA TTAGCCTCCAGGAGACTGAA
Downstream 100 bases:
>100_bases GTCCTCCAGATCCAATCGCGGGCAAGCCCGCTCCCACAGGATTTCACTGAACCTGTGGGAGCGGGCTTGCCCGCGATTGC TTTCTTCTAAACGCTACAAA
Product: Ferritin and Dps
Products: NA
Alternate protein names: Bacterioferritin; Ferritin And Dps; Ferritin-Like Domain Subfamily; RubrerythrinFerritin And Dps; Bacterioferritin-Like Domain-Containing Protein; Rubrerythrin Family Protein
Number of amino acids: Translated: 176; Mature: 175
Protein sequence:
>176_residues MSDLQLSDVQTLRERARQHVENGAVTESYSANREEVLRLLNESLATELVCVLRYKRHYFMANGLKANVAADEFLEHATQE AEHADRLAERIVQLGGEPEFNPDLLSKMSHAQYVAGNTLKEMVYEDLVAERIAIDSYREIIQYIGEKDPTTRRIFEDILA QEEEHADDMADILKDL
Sequences:
>Translated_176_residues MSDLQLSDVQTLRERARQHVENGAVTESYSANREEVLRLLNESLATELVCVLRYKRHYFMANGLKANVAADEFLEHATQE AEHADRLAERIVQLGGEPEFNPDLLSKMSHAQYVAGNTLKEMVYEDLVAERIAIDSYREIIQYIGEKDPTTRRIFEDILA QEEEHADDMADILKDL >Mature_175_residues SDLQLSDVQTLRERARQHVENGAVTESYSANREEVLRLLNESLATELVCVLRYKRHYFMANGLKANVAADEFLEHATQEA EHADRLAERIVQLGGEPEFNPDLLSKMSHAQYVAGNTLKEMVYEDLVAERIAIDSYREIIQYIGEKDPTTRRIFEDILAQ EEEHADDMADILKDL
Specific function: May Perform Analogous Functions In Iron Detoxification And Storage To That Of Animal Ferritins. [C]
COG id: COG2193
COG function: function code P; Bacterioferritin (cytochrome b1)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 1639 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20181; Mature: 20050
Theoretical pI: Translated: 4.39; Mature: 4.39
Prosite motif: PS50905 FERRITIN_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDLQLSDVQTLRERARQHVENGAVTESYSANREEVLRLLNESLATELVCVLRYKRHYFM CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ANGLKANVAADEFLEHATQEAEHADRLAERIVQLGGEPEFNPDLLSKMSHAQYVAGNTLK HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH EMVYEDLVAERIAIDSYREIIQYIGEKDPTTRRIFEDILAQEEEHADDMADILKDL HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCC >Mature Secondary Structure SDLQLSDVQTLRERARQHVENGAVTESYSANREEVLRLLNESLATELVCVLRYKRHYFM CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ANGLKANVAADEFLEHATQEAEHADRLAERIVQLGGEPEFNPDLLSKMSHAQYVAGNTLK HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH EMVYEDLVAERIAIDSYREIIQYIGEKDPTTRRIFEDILAQEEEHADDMADILKDL HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA