| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77456773
Identifier: 77456773
GI number: 77456773
Start: 637777
End: 638364
Strand: Reverse
Name: 77456773
Synonym: Pfl01_0545
Alternate gene names: NA
Gene position: 638364-637777 (Counterclockwise)
Preceding gene: 77456775
Following gene: 77456772
Centisome position: 9.91
GC content: 62.76
Gene sequence:
>588_bases ATGTCTCTCACATCCGTTTGTGTATTTTGCGGTGCCAACGCTGGCACCATCCCGGCGTACACCGAAGCCGCGATCGCCCT CGGCACGGCTATCGCCGAGCGTAAGCTGACGCTGGTCTACGGCGGTGGCGCCGTCGGCCTGATGGGGATTATCGCTGACG CCGCGCTGGCGGCCGGTGGCGAGGTGATCGGCATCATCCCGCAGAGCCTGATGGACAAGGAAATCGGTCACAAGAGCCTG ACGCGTCTGGAAGTGGTCGACGGCATGCACGCGCGCAAGGCGAGGATGGCCGAACTCAGCGATGCGTTCATCGCCCTGCC CGGTGGCCTCGGCACCCTGGAAGAGTTGTTCGAAGTCTGGACCTGGGGCCAGCTCGGCTACCACGGCAAGCCGCTCGGCC TGCTCGAGGTGAACGGTTTCTACAGCAAACTCACTGCATTTCTCGATCACATCGTCGGCGAAGGCTTCGTTCGCGCGCCA CACCGTGACATGCTGCAAGTGAGCGAATCGCCGCAAACGCTGCTCGAAGCCCTCGATCAATGGCAGCCGACCGTCACGCC AAAGTGGGTCGACCAGAAACCCGGTTAA
Upstream 100 bases:
>100_bases GGTGCAAGCGGCACCTGTGAAACCCCGAAACGCGAAGTCTAGCCCTTGGATCAAGGCGTGCCAGCCATTACCCTGTGACC GATTGACCCAGGAGGAAGGC
Downstream 100 bases:
>100_bases CCCCCGGGCACCGATACAGGGCAGAATACGCGCCGCTCAACCTCACCTTCGACCCCAGAGGATCGCCCATGGCCAAACCC AATTACTCCTTCGCCAAACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 195; Mature: 194
Protein sequence:
>195_residues MSLTSVCVFCGANAGTIPAYTEAAIALGTAIAERKLTLVYGGGAVGLMGIIADAALAAGGEVIGIIPQSLMDKEIGHKSL TRLEVVDGMHARKARMAELSDAFIALPGGLGTLEELFEVWTWGQLGYHGKPLGLLEVNGFYSKLTAFLDHIVGEGFVRAP HRDMLQVSESPQTLLEALDQWQPTVTPKWVDQKPG
Sequences:
>Translated_195_residues MSLTSVCVFCGANAGTIPAYTEAAIALGTAIAERKLTLVYGGGAVGLMGIIADAALAAGGEVIGIIPQSLMDKEIGHKSL TRLEVVDGMHARKARMAELSDAFIALPGGLGTLEELFEVWTWGQLGYHGKPLGLLEVNGFYSKLTAFLDHIVGEGFVRAP HRDMLQVSESPQTLLEALDQWQPTVTPKWVDQKPG >Mature_194_residues SLTSVCVFCGANAGTIPAYTEAAIALGTAIAERKLTLVYGGGAVGLMGIIADAALAAGGEVIGIIPQSLMDKEIGHKSLT RLEVVDGMHARKARMAELSDAFIALPGGLGTLEELFEVWTWGQLGYHGKPLGLLEVNGFYSKLTAFLDHIVGEGFVRAPH RDMLQVSESPQTLLEALDQWQPTVTPKWVDQKPG
Specific function: Unknown
COG id: COG1611
COG function: function code R; Predicted Rossmann fold nucleotide-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the LOG family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6322406, Length=217, Percent_Identity=37.7880184331797, Blast_Score=149, Evalue=4e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005269 [H]
Pfam domain/function: PF03641 Lysine_decarbox [H]
EC number: NA
Molecular weight: Translated: 20730; Mature: 20599
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLTSVCVFCGANAGTIPAYTEAAIALGTAIAERKLTLVYGGGAVGLMGIIADAALAAGG CCHHHEEHEECCCCCCCCCHHHHHHHHHHHHHHCEEEEEECCCHHHHHHHHHHHHHHCCC EVIGIIPQSLMDKEIGHKSLTRLEVVDGMHARKARMAELSDAFIALPGGLGTLEELFEVW CEEEECCHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHH TWGQLGYHGKPLGLLEVNGFYSKLTAFLDHIVGEGFVRAPHRDMLQVSESPQTLLEALDQ CCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCHHHHHHHHHH WQPTVTPKWVDQKPG CCCCCCCCCCCCCCC >Mature Secondary Structure SLTSVCVFCGANAGTIPAYTEAAIALGTAIAERKLTLVYGGGAVGLMGIIADAALAAGG CHHHEEHEECCCCCCCCCHHHHHHHHHHHHHHCEEEEEECCCHHHHHHHHHHHHHHCCC EVIGIIPQSLMDKEIGHKSLTRLEVVDGMHARKARMAELSDAFIALPGGLGTLEELFEVW CEEEECCHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHH TWGQLGYHGKPLGLLEVNGFYSKLTAFLDHIVGEGFVRAPHRDMLQVSESPQTLLEALDQ CCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCHHHHHHHHHH WQPTVTPKWVDQKPG CCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043; 2116366 [H]