| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77456771
Identifier: 77456771
GI number: 77456771
Start: 636574
End: 637464
Strand: Direct
Name: 77456771
Synonym: Pfl01_0543
Alternate gene names: NA
Gene position: 636574-637464 (Clockwise)
Preceding gene: 77456770
Following gene: 77456774
Centisome position: 9.89
GC content: 63.41
Gene sequence:
>891_bases ATGAGCGCCCATTACCAGATCCTTCACGACACGTGCTATCGCTACGACAGTCCGGTGTCCCTGGCCCAGCAACTGGCGCA CCTGTGGCCGCGCGAATGCGAGTGGCAGCGTTGCACCGAACAGCAATTGCTGATCAGTCCGGAGCCGACCACCCGCCGTG ACGAGCAGGATGTGTTCGGCAATCCGCTCACCCGCCTGGCCTTCGAACGGCCGCATGATGAATTGCAGGTCAACGCACGG CTGACGGTGGAAGTGCTGGCGCGACCCGTGGTGGATTTCCAGCAGTCACCGGCCTGGGAGTTGACGCGCAACGCGCTGAC TTACAGCAGTCAGCCGTTGTCTGCCTCGTTGCTGGAAGCCTGTCGCTATCGATTCCAGTCGCCCTACGTGCACCTGAAGC GCAGTTTCGTCGAGTTCTCGGAGAGCTGTTTCCCGGCCGGCAGGCCTCTGATGCTGGGTGTGCAGGCCCTGATGCAGAAG ATTTTCAGCGAATTCACCTTCGATGCCGAAGCGACGCAAGTCGCGACGCCGCTGGTGGAAGTGCTGGAGCGCCGACGCGG GGTCTGTCAGGACTTTGCGCATCTGATGCTTGCCTGTGTGCGCTCACGCGGGCTGGCGGCGCGTTACGTCAGCGGTTACC TGCTGACCCAACCGCCACCGGGGCAGCCACGGTTGATCGGCGCCGACGCGTCCCATGCCTGGGTTTCGGTGTTTTGCCCG GTGCTGGGCTGGGTGGACTTCGATCCGACAAACAATGTGCAGCCGGCACTGGAGCACATCACCCTGGCCTGGGGCCGGGA TTTCTCCGATGTCTCGCCGTTGCGCGGGGTGATTCTGGGGGGAGGGAGCCATGATCCGGAGGTGCGGGTCACGGTGATGC CGCTGGAGTAA
Upstream 100 bases:
>100_bases TGCAGGAGATCGCCGACGCCAGCAGTCAGGTGTCGGATCGTCTGGCCCTGCGCCATTTCGCCCATGTCGATGATGTCAGC CAGCGCACGGTGTCCGTCTG
Downstream 100 bases:
>100_bases GTGCGATCCATTGTGGGAGCCAGTCAGCTCCCACAATGGAGTGTGTTCAATTTCGCGATTCAGCTCAGGTGTCGGGTGCC TGGTCTTTCGGTGCCTCAAC
Product: transglutaminase-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 296; Mature: 295
Protein sequence:
>296_residues MSAHYQILHDTCYRYDSPVSLAQQLAHLWPRECEWQRCTEQQLLISPEPTTRRDEQDVFGNPLTRLAFERPHDELQVNAR LTVEVLARPVVDFQQSPAWELTRNALTYSSQPLSASLLEACRYRFQSPYVHLKRSFVEFSESCFPAGRPLMLGVQALMQK IFSEFTFDAEATQVATPLVEVLERRRGVCQDFAHLMLACVRSRGLAARYVSGYLLTQPPPGQPRLIGADASHAWVSVFCP VLGWVDFDPTNNVQPALEHITLAWGRDFSDVSPLRGVILGGGSHDPEVRVTVMPLE
Sequences:
>Translated_296_residues MSAHYQILHDTCYRYDSPVSLAQQLAHLWPRECEWQRCTEQQLLISPEPTTRRDEQDVFGNPLTRLAFERPHDELQVNAR LTVEVLARPVVDFQQSPAWELTRNALTYSSQPLSASLLEACRYRFQSPYVHLKRSFVEFSESCFPAGRPLMLGVQALMQK IFSEFTFDAEATQVATPLVEVLERRRGVCQDFAHLMLACVRSRGLAARYVSGYLLTQPPPGQPRLIGADASHAWVSVFCP VLGWVDFDPTNNVQPALEHITLAWGRDFSDVSPLRGVILGGGSHDPEVRVTVMPLE >Mature_295_residues SAHYQILHDTCYRYDSPVSLAQQLAHLWPRECEWQRCTEQQLLISPEPTTRRDEQDVFGNPLTRLAFERPHDELQVNARL TVEVLARPVVDFQQSPAWELTRNALTYSSQPLSASLLEACRYRFQSPYVHLKRSFVEFSESCFPAGRPLMLGVQALMQKI FSEFTFDAEATQVATPLVEVLERRRGVCQDFAHLMLACVRSRGLAARYVSGYLLTQPPPGQPRLIGADASHAWVSVFCPV LGWVDFDPTNNVQPALEHITLAWGRDFSDVSPLRGVILGGGSHDPEVRVTVMPLE
Specific function: Unknown
COG id: COG1305
COG function: function code E; Transglutaminase-like enzymes, putative cysteine proteases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.leprae ML0607 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013589 - InterPro: IPR002931 [H]
Pfam domain/function: PF08379 Bact_transglu_N; PF01841 Transglut_core [H]
EC number: NA
Molecular weight: Translated: 33478; Mature: 33347
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAHYQILHDTCYRYDSPVSLAQQLAHLWPRECEWQRCTEQQLLISPEPTTRRDEQDVFG CCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHCCCCCEEECCCCCCCCCCHHHCC NPLTRLAFERPHDELQVNARLTVEVLARPVVDFQQSPAWELTRNALTYSSQPLSASLLEA CHHHHHHHHCCCCCEEECCEEHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHH CRYRFQSPYVHLKRSFVEFSESCFPAGRPLMLGVQALMQKIFSEFTFDAEATQVATPLVE HHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH VLERRRGVCQDFAHLMLACVRSRGLAARYVSGYLLTQPPPGQPRLIGADASHAWVSVFCP HHHHHCCHHHHHHHHHHHHHHHCCCHHHHHCCEEEECCCCCCCEEEECCCCHHHHHHHHH VLGWVDFDPTNNVQPALEHITLAWGRDFSDVSPLRGVILGGGSHDPEVRVTVMPLE HHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCEEEEEEECC >Mature Secondary Structure SAHYQILHDTCYRYDSPVSLAQQLAHLWPRECEWQRCTEQQLLISPEPTTRRDEQDVFG CCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHCCCCCEEECCCCCCCCCCHHHCC NPLTRLAFERPHDELQVNARLTVEVLARPVVDFQQSPAWELTRNALTYSSQPLSASLLEA CHHHHHHHHCCCCCEEECCEEHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHH CRYRFQSPYVHLKRSFVEFSESCFPAGRPLMLGVQALMQKIFSEFTFDAEATQVATPLVE HHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH VLERRRGVCQDFAHLMLACVRSRGLAARYVSGYLLTQPPPGQPRLIGADASHAWVSVFCP HHHHHCCHHHHHHHHHHHHHHHCCCHHHHHCCEEEECCCCCCCEEEECCCCHHHHHHHHH VLGWVDFDPTNNVQPALEHITLAWGRDFSDVSPLRGVILGGGSHDPEVRVTVMPLE HHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]