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The map label for this gene is ygiQ [C]

Identifier: 77456768

GI number: 77456768

Start: 628114

End: 630417

Strand: Direct

Name: ygiQ [C]

Synonym: Pfl01_0540

Alternate gene names: 77456768

Gene position: 628114-630417 (Clockwise)

Preceding gene: 77456766

Following gene: 77456769

Centisome position: 9.76

GC content: 62.07

Gene sequence:

>2304_bases
ATGCAAGCAGCCAAGCCGTTATTTGACTATCCAAAATATTGGGCCGAATGTTTCGGGCCAGCGCCGTTCCTGCCGATGAG
CAGGGAGGAGATGGATCAGCTTGGCTGGGATTCCTGCGACATCATCATTGTCACGGGTGATGCCTACGTCGATCACCCGT
CGTTCGGCATGGCGATCATCGGCCGGCTGCTGGAGTCGCAAGGCTTCCGCGTCGGGATCATCGCGCAGCCGAACTGGCAG
TCCAAAGACGACTTCATGAAGCTCGGCGAGCCGAACCTGTTCTTCGGCGTCGCGGCCGGCAACATGGACTCAATGATCAA
CCGCTACACCGCGGACAAGAAAATCCGTTCCGACGACGCCTATACCCCAGGCGGCATGGCCGGCAAACGTCCGGACCGCG
CGAGCCTGGTTTACAGCCAGCGCTGCAAGGAAGCCTACAAGCACGTGCCGATCGTGCTCGGCGGCATCGAAGCCTCCCTG
CGCCGCATCGCCCACTACGACTACTGGCAGGATCGCGTACGCAACTCGATCCTGATCGACGCCAGCGCCGACATCCTGCT
GTACGGCAACGCCGAGCGGGCGATTGTCGAAGTCGCCCAGCGTCTGTCCTACGGTCACAAGATAGAAGACATCACCGATG
TGCGCGGCACCGCGTTCATCCGTCGTGACACCCCTGCGGGCTGGTACGAAGTCGACTCCACGCGCATCGACCGTCCGGGC
AAGATCGACAAGATCATCAACCCGTACGTCAACACCCAGGACACTCAGGCCTGCGCCATCGAGCAGGAGAAGGGGCCGGT
TGAAGACCCGGAAGAAGCCAAGGTCGTACAGATCCTGGCCAGCCCGAAAATGACCCGCGACAAGACCGTGATCCGCCTGC
CGTCGATGGAAAAGGTGCGTAACGACCCGGTCCTGTACGCCCACGCCAACCGCGTGCTGCACCTGGAAACCAACCCGGGC
AATGCCCGTGCGCTGGTGCAGAAGCATGGCGAGATCGACGTCTGGTTCAACCCGCCGCCGATTCCGATGACCACCGAAGA
AATGGACTATGTGTTCGGCATGCCTTACGCACGTGTTCCGCACCCTGCGTACGGCAAGGAAAAAATCCCGGCCTACGACA
TGATCCGCTTCTCGGTGAACATCATGCGTGGCTGCTTCGGTGGCTGCACGTTCTGCTCGATCACCGAGCACGAAGGCCGG
ATCATCCAGAACCGTTCCGAAGAGTCGATCATTCGCGAAATCGAAGAAATCCGCGACAAGGTGCCGGGTTTCACTGGCGT
CATTTCCGACCTCGGCGGCCCGACCGCGAACATGTACCGCATCGCCTGCAAGAGCCCGGAAATCGAATCCGCGTGCCGCA
AGCCGTCCTGCGTGTTCCCGGGCATCTGCCCGAACCTGAACACCGACCACTCGTCGCTGATCCAGCTCTATCGCAGCGCC
CGTGCGCTGCCGGGTGTGAAGAAGATCCTGATCGCCTCCGGCCTGCGTTACGACCTTGCGGTCGAGTCGCCGGAGTACGT
CAAGGAGCTGGTGACGCACCACGTCGGTGGTTACCTGAAGATCGCCCCGGAACACACCGAGGAAGGTCCGCTCAACCAGA
TGATGAAACCGGGGATCGGCACCTACGATCGCTTCAAGCGCATGTTCGAGAAGTACACCAAGGAAGCCGGGAAAGAGCAG
TACCTGATTCCGTACTTCATTGCCGCGCACCCGGGCACCACCGACGAAGACATGATGAACTTGGCCCTGTGGCTCAAGGG
TAACGGCTTCCGTGCCGACCAGGTCCAGGCGTTCTATCCGTCGCCGATGGCTACCGCCACCGCGATGTACCACTCGGGCA
AGAACCCGCTGCGCAAGGTCACCTACAAGAGCGACGGCGTGACCATCGTCAAGAGCGAGGAGCAGCGCCGTCTGCACAAG
GCGTTCCTGCGTTATCACGACCCGAAAGGCTGGCCGATGCTGCGTGAAGCGCTGACCCGCATGGGCCGCGCCGACCTGAT
CGGGCCGGGCAAGCACCAGTTGATCCCGCTGCACCAGCCGGCCACCGACAGCTACCAGAGTGCCCGTCGCAAGAACTCGA
CCCCGGCCGGCAGCCACAAGGTCGCGAAAGAGAAGACCACCAAGATCCTCACCCAGCACACCGGTCTGCCACCGCGCGCC
AGTGACGGCGGCAATCCATGGGACAAGCGTGAACAGGCCAAGGCCGCGGCGTTCGCCCGCAACCAGCAGGCCGCCAAGGA
ACGCAAGGAAGCGGCGAAAGGCAAAGGGCCGAAACCGGCACGCAAGCCGGTCGTACCGCGTTGA

Upstream 100 bases:

>100_bases
CGGTGCGACGAGAAACCGACCACAGTCGTCGGAATTGGTCAAAATTTGTGCTATATTCCGCGCCCGCGAAATTCAATGAA
AGCCAACACCGGTTATCGAC

Downstream 100 bases:

>100_bases
AACGCACTTGAGCTGAACAGAACGCCAACCTTCGGGTTGGCGTTTTGCTGATCGTTCCCACGCTCTGCGTGGGAATGCCT
CCAGGGACGCAGAGCGTCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 767; Mature: 767

Protein sequence:

>767_residues
MQAAKPLFDYPKYWAECFGPAPFLPMSREEMDQLGWDSCDIIIVTGDAYVDHPSFGMAIIGRLLESQGFRVGIIAQPNWQ
SKDDFMKLGEPNLFFGVAAGNMDSMINRYTADKKIRSDDAYTPGGMAGKRPDRASLVYSQRCKEAYKHVPIVLGGIEASL
RRIAHYDYWQDRVRNSILIDASADILLYGNAERAIVEVAQRLSYGHKIEDITDVRGTAFIRRDTPAGWYEVDSTRIDRPG
KIDKIINPYVNTQDTQACAIEQEKGPVEDPEEAKVVQILASPKMTRDKTVIRLPSMEKVRNDPVLYAHANRVLHLETNPG
NARALVQKHGEIDVWFNPPPIPMTTEEMDYVFGMPYARVPHPAYGKEKIPAYDMIRFSVNIMRGCFGGCTFCSITEHEGR
IIQNRSEESIIREIEEIRDKVPGFTGVISDLGGPTANMYRIACKSPEIESACRKPSCVFPGICPNLNTDHSSLIQLYRSA
RALPGVKKILIASGLRYDLAVESPEYVKELVTHHVGGYLKIAPEHTEEGPLNQMMKPGIGTYDRFKRMFEKYTKEAGKEQ
YLIPYFIAAHPGTTDEDMMNLALWLKGNGFRADQVQAFYPSPMATATAMYHSGKNPLRKVTYKSDGVTIVKSEEQRRLHK
AFLRYHDPKGWPMLREALTRMGRADLIGPGKHQLIPLHQPATDSYQSARRKNSTPAGSHKVAKEKTTKILTQHTGLPPRA
SDGGNPWDKREQAKAAAFARNQQAAKERKEAAKGKGPKPARKPVVPR

Sequences:

>Translated_767_residues
MQAAKPLFDYPKYWAECFGPAPFLPMSREEMDQLGWDSCDIIIVTGDAYVDHPSFGMAIIGRLLESQGFRVGIIAQPNWQ
SKDDFMKLGEPNLFFGVAAGNMDSMINRYTADKKIRSDDAYTPGGMAGKRPDRASLVYSQRCKEAYKHVPIVLGGIEASL
RRIAHYDYWQDRVRNSILIDASADILLYGNAERAIVEVAQRLSYGHKIEDITDVRGTAFIRRDTPAGWYEVDSTRIDRPG
KIDKIINPYVNTQDTQACAIEQEKGPVEDPEEAKVVQILASPKMTRDKTVIRLPSMEKVRNDPVLYAHANRVLHLETNPG
NARALVQKHGEIDVWFNPPPIPMTTEEMDYVFGMPYARVPHPAYGKEKIPAYDMIRFSVNIMRGCFGGCTFCSITEHEGR
IIQNRSEESIIREIEEIRDKVPGFTGVISDLGGPTANMYRIACKSPEIESACRKPSCVFPGICPNLNTDHSSLIQLYRSA
RALPGVKKILIASGLRYDLAVESPEYVKELVTHHVGGYLKIAPEHTEEGPLNQMMKPGIGTYDRFKRMFEKYTKEAGKEQ
YLIPYFIAAHPGTTDEDMMNLALWLKGNGFRADQVQAFYPSPMATATAMYHSGKNPLRKVTYKSDGVTIVKSEEQRRLHK
AFLRYHDPKGWPMLREALTRMGRADLIGPGKHQLIPLHQPATDSYQSARRKNSTPAGSHKVAKEKTTKILTQHTGLPPRA
SDGGNPWDKREQAKAAAFARNQQAAKERKEAAKGKGPKPARKPVVPR
>Mature_767_residues
MQAAKPLFDYPKYWAECFGPAPFLPMSREEMDQLGWDSCDIIIVTGDAYVDHPSFGMAIIGRLLESQGFRVGIIAQPNWQ
SKDDFMKLGEPNLFFGVAAGNMDSMINRYTADKKIRSDDAYTPGGMAGKRPDRASLVYSQRCKEAYKHVPIVLGGIEASL
RRIAHYDYWQDRVRNSILIDASADILLYGNAERAIVEVAQRLSYGHKIEDITDVRGTAFIRRDTPAGWYEVDSTRIDRPG
KIDKIINPYVNTQDTQACAIEQEKGPVEDPEEAKVVQILASPKMTRDKTVIRLPSMEKVRNDPVLYAHANRVLHLETNPG
NARALVQKHGEIDVWFNPPPIPMTTEEMDYVFGMPYARVPHPAYGKEKIPAYDMIRFSVNIMRGCFGGCTFCSITEHEGR
IIQNRSEESIIREIEEIRDKVPGFTGVISDLGGPTANMYRIACKSPEIESACRKPSCVFPGICPNLNTDHSSLIQLYRSA
RALPGVKKILIASGLRYDLAVESPEYVKELVTHHVGGYLKIAPEHTEEGPLNQMMKPGIGTYDRFKRMFEKYTKEAGKEQ
YLIPYFIAAHPGTTDEDMMNLALWLKGNGFRADQVQAFYPSPMATATAMYHSGKNPLRKVTYKSDGVTIVKSEEQRRLHK
AFLRYHDPKGWPMLREALTRMGRADLIGPGKHQLIPLHQPATDSYQSARRKNSTPAGSHKVAKEKTTKILTQHTGLPPRA
SDGGNPWDKREQAKAAAFARNQQAAKERKEAAKGKGPKPARKPVVPR

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0313 family [H]

Homologues:

Organism=Escherichia coli, GI48994917, Length=755, Percent_Identity=63.9735099337748, Blast_Score=1006, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006638
- InterPro:   IPR020612
- InterPro:   IPR007197
- InterPro:   IPR013704
- InterPro:   IPR022946 [H]

Pfam domain/function: PF04055 Radical_SAM; PF08497 Radical_SAM_N [H]

EC number: NA

Molecular weight: Translated: 86093; Mature: 86093

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: PS01278 UPF0004

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQAAKPLFDYPKYWAECFGPAPFLPMSREEMDQLGWDSCDIIIVTGDAYVDHPSFGMAII
CCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCEEEEEECCCEECCCCHHHHHH
GRLLESQGFRVGIIAQPNWQSKDDFMKLGEPNLFFGVAAGNMDSMINRYTADKKIRSDDA
HHHHHCCCCEEEEEECCCCCCCHHHHHCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCCC
YTPGGMAGKRPDRASLVYSQRCKEAYKHVPIVLGGIEASLRRIAHYDYWQDRVRNSILID
CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHCCEEEEE
ASADILLYGNAERAIVEVAQRLSYGHKIEDITDVRGTAFIRRDTPAGWYEVDSTRIDRPG
CCCCEEEECCCHHHHHHHHHHHHCCCCCCHHHHCCCEEEEEECCCCCCEECCCCCCCCCC
KIDKIINPYVNTQDTQACAIEQEKGPVEDPEEAKVVQILASPKMTRDKTVIRLPSMEKVR
CHHHHHCCCCCCCCCHHEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCEEEECCCHHHHC
NDPVLYAHANRVLHLETNPGNARALVQKHGEIDVWFNPPPIPMTTEEMDYVFGMPYARVP
CCCEEEEECCEEEEEECCCCCHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHCCCCCCCC
HPAYGKEKIPAYDMIRFSVNIMRGCFGGCTFCSITEHEGRIIQNRSEESIIREIEEIRDK
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEECCCCHHHHHHHHHHHHHH
VPGFTGVISDLGGPTANMYRIACKSPEIESACRKPSCVFPGICPNLNTDHSSLIQLYRSA
CCCHHHHHHHCCCCCCCEEEEEECCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHH
RALPGVKKILIASGLRYDLAVESPEYVKELVTHHVGGYLKIAPEHTEEGPLNQMMKPGIG
HCCCCHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHCCCCC
TYDRFKRMFEKYTKEAGKEQYLIPYFIAAHPGTTDEDMMNLALWLKGNGFRADQVQAFYP
HHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHEEEEEEEECCCCCCCCEEEECC
SPMATATAMYHSGKNPLRKVTYKSDGVTIVKSEEQRRLHKAFLRYHDPKGWPMLREALTR
CCHHHHHHHHHCCCCCHHEEEECCCCEEEEECHHHHHHHHHHHHHCCCCCCHHHHHHHHH
MGRADLIGPGKHQLIPLHQPATDSYQSARRKNSTPAGSHKVAKEKTTKILTQHTGLPPRA
CCCCCCCCCCCCCEEECCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCC
SDGGNPWDKREQAKAAAFARNQQAAKERKEAAKGKGPKPARKPVVPR
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQAAKPLFDYPKYWAECFGPAPFLPMSREEMDQLGWDSCDIIIVTGDAYVDHPSFGMAII
CCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCEEEEEECCCEECCCCHHHHHH
GRLLESQGFRVGIIAQPNWQSKDDFMKLGEPNLFFGVAAGNMDSMINRYTADKKIRSDDA
HHHHHCCCCEEEEEECCCCCCCHHHHHCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCCC
YTPGGMAGKRPDRASLVYSQRCKEAYKHVPIVLGGIEASLRRIAHYDYWQDRVRNSILID
CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHCCEEEEE
ASADILLYGNAERAIVEVAQRLSYGHKIEDITDVRGTAFIRRDTPAGWYEVDSTRIDRPG
CCCCEEEECCCHHHHHHHHHHHHCCCCCCHHHHCCCEEEEEECCCCCCEECCCCCCCCCC
KIDKIINPYVNTQDTQACAIEQEKGPVEDPEEAKVVQILASPKMTRDKTVIRLPSMEKVR
CHHHHHCCCCCCCCCHHEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCEEEECCCHHHHC
NDPVLYAHANRVLHLETNPGNARALVQKHGEIDVWFNPPPIPMTTEEMDYVFGMPYARVP
CCCEEEEECCEEEEEECCCCCHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHCCCCCCCC
HPAYGKEKIPAYDMIRFSVNIMRGCFGGCTFCSITEHEGRIIQNRSEESIIREIEEIRDK
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEECCCCHHHHHHHHHHHHHH
VPGFTGVISDLGGPTANMYRIACKSPEIESACRKPSCVFPGICPNLNTDHSSLIQLYRSA
CCCHHHHHHHCCCCCCCEEEEEECCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHH
RALPGVKKILIASGLRYDLAVESPEYVKELVTHHVGGYLKIAPEHTEEGPLNQMMKPGIG
HCCCCHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHCCCCC
TYDRFKRMFEKYTKEAGKEQYLIPYFIAAHPGTTDEDMMNLALWLKGNGFRADQVQAFYP
HHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHEEEEEEEECCCCCCCCEEEECC
SPMATATAMYHSGKNPLRKVTYKSDGVTIVKSEEQRRLHKAFLRYHDPKGWPMLREALTR
CCHHHHHHHHHCCCCCHHEEEECCCCEEEEECHHHHHHHHHHHHHCCCCCCHHHHHHHHH
MGRADLIGPGKHQLIPLHQPATDSYQSARRKNSTPAGSHKVAKEKTTKILTQHTGLPPRA
CCCCCCCCCCCCCEEECCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCC
SDGGNPWDKREQAKAAAFARNQQAAKERKEAAKGKGPKPARKPVVPR
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12928499 [H]