| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is yjeE [H]
Identifier: 77456747
GI number: 77456747
Start: 601212
End: 601643
Strand: Direct
Name: yjeE [H]
Synonym: Pfl01_0519
Alternate gene names: 77456747
Gene position: 601212-601643 (Clockwise)
Preceding gene: 77456746
Following gene: 77456748
Centisome position: 9.34
GC content: 58.33
Gene sequence:
>432_bases ATGAGCGACTTTGGCGCACGCATCGCCCGTATCACCCAGGGCCATGGCCTGATCTTTCTCGAAGGCAACCTAGGGATGGG TAAAACCACGCTGTCGCGGGGCATCATTCGCGGCCTGGGGCACGTCGGGGCGGTGAAAAGTCCGACCTTCACGTTGGTCG AGCCCTACGAGATCGGTGACGTCCGGGCGTTTCACTTTGACCTGTATCGCTTGGTCGATCCGGAAGAGCTGGAGTTTCTC GGGATTCGCGACTATTTCGAAGACGACGCCCTGTGCCTGATCGAATGGCCCGATAAAGGTGCAGGCTTTTTGCCAAAGCC TGACCTGACCATTACCATTAGCCCGCAAGACAGCGGACGTTCGCTGACCATTTTATCCCAGGGCTCGCGCGGCGAGGCCT GGTGTGCCGCTTTGGCATTGGAAACCAATTGA
Upstream 100 bases:
>100_bases GTGGGCTGGCGGCCAGTGATCTGATTCCAGCCATTCGTCAGTTGTTGGAGGAGCATGCACCGTGTCTGAAGTAACCCTGT ACCTGGCCGATGAACAGGCC
Downstream 100 bases:
>100_bases ATGATGGGGTTAGGTATGCGCTTTCGCGCGTTGGTGGCTGCCGCTGGACTGATGTTGATGGCAGTAACCGTCAACGCTGT GGCCGAGACGAAGGTCAACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 143; Mature: 142
Protein sequence:
>143_residues MSDFGARIARITQGHGLIFLEGNLGMGKTTLSRGIIRGLGHVGAVKSPTFTLVEPYEIGDVRAFHFDLYRLVDPEELEFL GIRDYFEDDALCLIEWPDKGAGFLPKPDLTITISPQDSGRSLTILSQGSRGEAWCAALALETN
Sequences:
>Translated_143_residues MSDFGARIARITQGHGLIFLEGNLGMGKTTLSRGIIRGLGHVGAVKSPTFTLVEPYEIGDVRAFHFDLYRLVDPEELEFL GIRDYFEDDALCLIEWPDKGAGFLPKPDLTITISPQDSGRSLTILSQGSRGEAWCAALALETN >Mature_142_residues SDFGARIARITQGHGLIFLEGNLGMGKTTLSRGIIRGLGHVGAVKSPTFTLVEPYEIGDVRAFHFDLYRLVDPEELEFLG IRDYFEDDALCLIEWPDKGAGFLPKPDLTITISPQDSGRSLTILSQGSRGEAWCAALALETN
Specific function: Unknown
COG id: COG0802
COG function: function code R; Predicted ATPase or kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0079 family [H]
Homologues:
Organism=Escherichia coli, GI1790610, Length=137, Percent_Identity=55.4744525547445, Blast_Score=164, Evalue=2e-42,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003442 [H]
Pfam domain/function: PF02367 UPF0079 [H]
EC number: NA
Molecular weight: Translated: 15655; Mature: 15524
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDFGARIARITQGHGLIFLEGNLGMGKTTLSRGIIRGLGHVGAVKSPTFTLVEPYEIGD CCCHHCEEEEEECCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEECCEECCC VRAFHFDLYRLVDPEELEFLGIRDYFEDDALCLIEWPDKGAGFLPKPDLTITISPQDSGR EEEEEEEEEECCCCCCEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCCC SLTILSQGSRGEAWCAALALETN EEEEEECCCCCCEEEEEEEEECC >Mature Secondary Structure SDFGARIARITQGHGLIFLEGNLGMGKTTLSRGIIRGLGHVGAVKSPTFTLVEPYEIGD CCHHCEEEEEECCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEECCEECCC VRAFHFDLYRLVDPEELEFLGIRDYFEDDALCLIEWPDKGAGFLPKPDLTITISPQDSGR EEEEEEEEEECCCCCCEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCCC SLTILSQGSRGEAWCAALALETN EEEEEECCCCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP [C]
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]